Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D16
         (857 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC077727-1|AAH77727.1|  541|Homo sapiens DKFZP564J0863 protein p...    31   4.1  
AK023383-1|BAB14552.1|  541|Homo sapiens protein ( Homo sapiens ...    31   4.1  
DQ860102-1|ABI64147.1| 1159|Homo sapiens RAD51-associated protei...    31   7.1  
BC053508-1|AAH53508.1|  412|Homo sapiens ARL6IP2 protein protein.      31   7.1  
AK026946-1|BAB15598.1|  579|Homo sapiens protein ( Homo sapiens ...    31   7.1  
AF449187-2|AAM97341.1|  579|Homo sapiens ARL6IP2 protein.              31   7.1  
AF449187-1|AAM97342.1|  583|Homo sapiens ARL6IP2 protein.              31   7.1  
AC016995-1|AAX88950.1|  579|Homo sapiens unknown protein.              31   7.1  

>BC077727-1|AAH77727.1|  541|Homo sapiens DKFZP564J0863 protein
           protein.
          Length = 541

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -2

Query: 502 CISVSERHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGDR---DVITRLTYAAFTFLWR 338
           C ++     MTS+V++ N+SQN++ DD    Q+F    R   D I +  +    FL R
Sbjct: 156 CATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVR 213


>AK023383-1|BAB14552.1|  541|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13321 fis, clone OVARC1001703, weakly similar to
           Mus musculus ARL-6 interacting protein-2 (Aip-2) mRNA.
           ).
          Length = 541

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -2

Query: 502 CISVSERHVMTSTVKLGNMSQNVRCDDFFVAQIFHRGDR---DVITRLTYAAFTFLWR 338
           C ++     MTS+V++ N+SQN++ DD    Q+F    R   D I +  +    FL R
Sbjct: 156 CATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVR 213


>DQ860102-1|ABI64147.1| 1159|Homo sapiens RAD51-associated protein 2
           protein.
          Length = 1159

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +2

Query: 287 RSTAKIKHYADQNTSSCTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVLAHVAQ--- 457
           ++T K K     N  +C+    +C++R S  N ++    +    E + SYVL  + +   
Sbjct: 337 QNTCKRKDLISSNYCNCS--SIQCNVRDSRKNFAILENANWEEAECLDSYVLTRLEKSQN 394

Query: 458 FDCR-RHHMAFTNGN 499
           +DC  RH +    GN
Sbjct: 395 WDCNVRHILRRNRGN 409


>BC053508-1|AAH53508.1|  412|Homo sapiens ARL6IP2 protein protein.
          Length = 412

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 502 CISVSERHVMTSTVKLGNMSQNVRCDDFFVAQIF 401
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 16  CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 49


>AK026946-1|BAB15598.1|  579|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23293 fis, clone HEP10514. ).
          Length = 579

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 502 CISVSERHVMTSTVKLGNMSQNVRCDDFFVAQIF 401
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220


>AF449187-2|AAM97341.1|  579|Homo sapiens ARL6IP2 protein.
          Length = 579

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 502 CISVSERHVMTSTVKLGNMSQNVRCDDFFVAQIF 401
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220


>AF449187-1|AAM97342.1|  583|Homo sapiens ARL6IP2 protein.
          Length = 583

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 502 CISVSERHVMTSTVKLGNMSQNVRCDDFFVAQIF 401
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220


>AC016995-1|AAX88950.1|  579|Homo sapiens unknown protein.
          Length = 579

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 502 CISVSERHVMTSTVKLGNMSQNVRCDDFFVAQIF 401
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,662,778
Number of Sequences: 237096
Number of extensions: 2422554
Number of successful extensions: 11813
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11813
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)