Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D16
         (857 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    41   0.002
BT001902-1|AAN71691.1|  678|Drosophila melanogaster SD21996p pro...    29   8.2  
BT001534-1|AAN71289.1|  711|Drosophila melanogaster RE08101p pro...    29   8.2  
AY061262-1|AAL28810.1|  465|Drosophila melanogaster LD19190p pro...    29   8.2  
AE014298-640|AAF45955.1|  465|Drosophila melanogaster CG11436-PA...    29   8.2  
AE014297-1998|AAN13649.2|  678|Drosophila melanogaster CG4898-PH...    29   8.2  
AE014297-1990|AAN13648.2|  711|Drosophila melanogaster CG4898-PE...    29   8.2  

>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
           protein.
          Length = 1053

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +2

Query: 323 NTSSCTPQERECSIRKSCNNVS--VTSMEDLSHEEIVTSYVLAHVAQFDCRRHHMAFTNG 496
           N  +  P   EC    +   V+   T   ++  EEI  + VLAH+A  D R   + FT+ 
Sbjct: 111 NLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHMANIDSRLQRVLFTSN 170

Query: 497 NTTRNKLLQEIKA 535
             TR+KL  E+KA
Sbjct: 171 VRTRSKLQAELKA 183


>BT001902-1|AAN71691.1|  678|Drosophila melanogaster SD21996p
           protein.
          Length = 678

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
 Frame = +2

Query: 245 SGLYSHWRDVFEHVRSTAKIKHYADQNTSSCTPQ--ERECSIRKSCNNVSVT---SMEDL 409
           SGL S W  + E +     + +Y D+       Q  ER  ++R+S ++  V+   S  D+
Sbjct: 179 SGLSSRWCSIEEQLNLLDDLLYYCDEEAELYLAQLYERFETLRRSRSSSPVSDFWSDSDM 238

Query: 410 SHEEIVTSYVLAHVA 454
            H++  TS   +H A
Sbjct: 239 EHDDSSTSGTGSHTA 253


>BT001534-1|AAN71289.1|  711|Drosophila melanogaster RE08101p
           protein.
          Length = 711

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
 Frame = +2

Query: 245 SGLYSHWRDVFEHVRSTAKIKHYADQNTSSCTPQ--ERECSIRKSCNNVSVT---SMEDL 409
           SGL S W  + E +     + +Y D+       Q  ER  ++R+S ++  V+   S  D+
Sbjct: 167 SGLSSRWCSIEEQLNLLDDLLYYCDEEAELYLAQLYERFETLRRSRSSSPVSDFWSDSDM 226

Query: 410 SHEEIVTSYVLAHVA 454
            H++  TS   +H A
Sbjct: 227 EHDDSSTSGTGSHTA 241


>AY061262-1|AAL28810.1|  465|Drosophila melanogaster LD19190p
           protein.
          Length = 465

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +2

Query: 212 MSTLKLISEVRSGLYSHWRDVFEHVRSTAKIKHYADQNTSSCTPQERECSIRKSCNNVSV 391
           +S L+ +++  S +YS+ + +   V+   K+KH+  QN      Q+     R+     + 
Sbjct: 315 ISCLENLTKKTSKMYSYVKYMQNEVKEFKKLKHHISQNHERLIQQQLPLGARRLLGLDAK 374

Query: 392 TSMEDL 409
           T+ +DL
Sbjct: 375 TNNDDL 380


>AE014298-640|AAF45955.1|  465|Drosophila melanogaster CG11436-PA
           protein.
          Length = 465

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +2

Query: 212 MSTLKLISEVRSGLYSHWRDVFEHVRSTAKIKHYADQNTSSCTPQERECSIRKSCNNVSV 391
           +S L+ +++  S +YS+ + +   V+   K+KH+  QN      Q+     R+     + 
Sbjct: 315 ISCLENLTKKTSKMYSYVKYMQNEVKEFKKLKHHISQNHERLIQQQLPLGARRLLGLDAK 374

Query: 392 TSMEDL 409
           T+ +DL
Sbjct: 375 TNNDDL 380


>AE014297-1998|AAN13649.2|  678|Drosophila melanogaster CG4898-PH,
           isoform H protein.
          Length = 678

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
 Frame = +2

Query: 245 SGLYSHWRDVFEHVRSTAKIKHYADQNTSSCTPQ--ERECSIRKSCNNVSVT---SMEDL 409
           SGL S W  + E +     + +Y D+       Q  ER  ++R+S ++  V+   S  D+
Sbjct: 179 SGLSSRWCSIEEQLNLLDDLLYYCDEEAELYLAQLYERFETLRRSRSSSPVSDFWSDSDM 238

Query: 410 SHEEIVTSYVLAHVA 454
            H++  TS   +H A
Sbjct: 239 EHDDSSTSGTGSHTA 253


>AE014297-1990|AAN13648.2|  711|Drosophila melanogaster CG4898-PE,
           isoform E protein.
          Length = 711

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
 Frame = +2

Query: 245 SGLYSHWRDVFEHVRSTAKIKHYADQNTSSCTPQ--ERECSIRKSCNNVSVT---SMEDL 409
           SGL S W  + E +     + +Y D+       Q  ER  ++R+S ++  V+   S  D+
Sbjct: 167 SGLSSRWCSIEEQLNLLDDLLYYCDEEAELYLAQLYERFETLRRSRSSSPVSDFWSDSDM 226

Query: 410 SHEEIVTSYVLAHVA 454
            H++  TS   +H A
Sbjct: 227 EHDDSSTSGTGSHTA 241


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,063,247
Number of Sequences: 53049
Number of extensions: 703919
Number of successful extensions: 1374
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)