Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_D15
(849 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 66 4e-11
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 64 1e-10
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 61 1e-09
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 60 2e-09
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 5e-08
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 55 6e-08
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 55 8e-08
SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10) 53 3e-07
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 52 4e-07
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 52 6e-07
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 50 2e-06
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 48 1e-05
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 46 4e-05
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 45 9e-05
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22) 44 2e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 41 0.001
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 41 0.001
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 40 0.002
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 40 0.002
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 40 0.003
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 39 0.006
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.016
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 37 0.018
SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.024
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 37 0.024
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 36 0.031
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 33 0.29
SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26) 31 1.2
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 31 1.6
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.6
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.1
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2) 29 3.6
SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05) 29 3.6
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 3.6
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 29 3.6
SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32) 29 4.8
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 4.8
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 29 4.8
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 4.8
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29) 28 8.3
SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24) 28 8.3
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 65.7 bits (153), Expect = 4e-11
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Frame = +3
Query: 135 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 299
++ LL Y +D+ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 300 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIKR 458
WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W+
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154
Query: 459 LDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMD 566
I + + + +P D+Q C FGS H+ ++D
Sbjct: 155 AIIKSECKIDVRFFPFDVQSCELTFGSWTHDGLKID 190
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +3
Query: 135 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 299
+++ L Y +D+ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 300 WNAGEW-GCSTWLVSSERLWRPDVVLLN 380
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 64.1 bits (149), Expect = 1e-10
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Frame = +3
Query: 234 ESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD-- 404
E +++ ++ W + LSWNA E+G S + ++LW+PD+ L N A ++A
Sbjct: 104 EKYELLKLSLYVRQIWKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSL 163
Query: 405 YALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVID 578
Y +A+ VS+ G W+ ++T + + +P D Q CT KFGS +++ +D
Sbjct: 164 YGFKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVDIDTS 223
Query: 579 --KRIYSMFXSGAWD 617
I +G WD
Sbjct: 224 PTASIKGYQQNGEWD 238
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 61.3 bits (142), Expect = 1e-09
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Frame = +3
Query: 201 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL 377
LTL+ H ++E ++ L+ W D RL+WN E+G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 378 NAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGS 539
N+A + +R +++ G V W+ L + T M + ++P D Q C +FGS
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQACELRFGS 136
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 60.5 bits (140), Expect = 2e-09
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Frame = +3
Query: 246 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 416
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 417 ---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDF-VIDKR 584
V +NG V W+ + + + M + ++P D Q C KF S + E+ +D
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYCGLKFASWTGSQSELRLDAMDND 151
Query: 585 IYSMF-XSGAWDV 620
+ + S WD+
Sbjct: 152 VRQNYSESSEWDL 164
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 425
+++ W D L+WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 426 SNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVIDK 581
S++GS +W+ I T + + +P D+Q C KFGS H+ ++D + K
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFGSWTHDGLKIDIQLRK 137
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 58.4 bits (135), Expect = 7e-09
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Frame = +3
Query: 219 HANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-AT 392
H + + TV L W D L+WN ++G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 393 TAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDE 560
++G+ + + + ++G+V W+ + + + + + N+P D Q C +FGS ++ E
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLEFGSWAYDGFE 317
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 55.6 bits (128), Expect = 5e-08
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 8/204 (3%)
Frame = +3
Query: 42 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRH 221
M+ + LLPFL S E+ +++ L Y++++ P V+N + +
Sbjct: 1 MAPLLLSLLPFLFVFPSLSVDHTEDVEHR--LLNDLFKDYNKEARP----VLNKSEAI-- 52
Query: 222 ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAAT 392
E + + + + W++ L+W+ +G T + V+ +W+PD+VL +
Sbjct: 53 ----EVQFDMAYAQLINLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGE 108
Query: 393 TAGDYAL--RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMD 566
T Y RA + +NG W +I + ++ + +P D Q C KFGS ++ +++
Sbjct: 109 TGAIYKFDTRATIMHNGYTEWFAPTEIHSICAIDITYFPFDEQFCKMKFGSWSYSGRQLN 168
Query: 567 FVI--DKRIYSMF-XSGAWDVTAL 629
D S + SG WD+ +
Sbjct: 169 LTSKGDSADLSKYTKSGEWDLLGM 192
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 55.2 bits (127), Expect = 6e-08
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGD----------Y 407
+ + W + LSWNA E+ G S VS +R W PD++L N+ +A + Y
Sbjct: 21 IAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGGGTEKY 80
Query: 408 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVID 578
+ + +NG SW+ + + +P D Q CT +FGS ++ ++D ID
Sbjct: 81 KTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFGSWAFDASQLDLQID 137
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 54.8 bits (126), Expect = 8e-08
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Frame = +3
Query: 210 HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 386
HLR + V + ++ W + L+WN ++G + ++ ++W PD++L N A
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 387 ATT-AGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMH-- 548
T AG Y S++G+ W ++ ++ + +P D Q C+ KFGS +
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLKFGSWTYVG 225
Query: 549 NSDEMDFVIDKRIYSMF-XSGAWDVTAL 629
N M D S + +G W + A+
Sbjct: 226 NRLTMTSTSDSADLSKYVNNGEWHLLAM 253
>SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)
Length = 384
Score = 53.2 bits (122), Expect = 3e-07
Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Frame = +3
Query: 279 WIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVLL-NAAATTAG--DYA-LRARVSNNGSV 443
W+++ +W+ E+G +V R +W+PD++L N G D+ R R++++G
Sbjct: 2 WLNQLTTWDPEEYGGVKEVVLQARDVWQPDIILYQNIIQDFDGRLDHTNTRVRITSSGMT 61
Query: 444 SWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVIDKR 584
W + T ++ + ++P D Q C FGS H+ +E++ + D++
Sbjct: 62 YWSMPFVVVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRK 108
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/125 (23%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 431
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 432 NGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVIDK---RIYSMFX 602
+G+ +W+ +T + + +P D Q C KFGS ++++ +D ++ I
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQECRLKFGSWTYDANSVDIFPEEDQASIKGYQK 163
Query: 603 SGAWD 617
+G WD
Sbjct: 164 NGEWD 168
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 52.0 bits (119), Expect = 6e-07
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Frame = +3
Query: 279 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 443
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 444 SWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDF---VIDKRIYSMFXSGAW 614
W+ + S+ ++++ +P D Q C+ KFGS + +D + +G W
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLKFGSWTFDGFHLDLKPEAPQASLSKFIPNGEW 159
Query: 615 DV 620
D+
Sbjct: 160 DL 161
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 52.0 bits (119), Expect = 6e-07
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Frame = +3
Query: 249 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD---YAL 413
V + + + W + L+W+ +G T + V R+WRPD++L N A T G +
Sbjct: 69 VSLHQIIDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYT 128
Query: 414 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFV----IDK 581
+ ++ +GS W+ + + + +P D Q C KFGS ++ ++ V D
Sbjct: 129 KVQLKFDGSSLWLAPIIFKSTCKFDVAYFPFDEQSCILKFGSWTYDGLRLNIVPENGTDI 188
Query: 582 RIYSMFXSGAWDVTALSS 635
I +G W++T +S+
Sbjct: 189 GIDKFVSNGEWELTGVSA 206
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +3
Query: 279 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGS 440
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 441 VSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVID 578
V WI + ++ ++++ WP D Q CT F S + E+ +D
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCTLTFSSWTYTESEIALKMD 509
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Frame = +3
Query: 228 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----T 392
+ E L+M W D L WN ++G T + + + +W P V++ N A +
Sbjct: 534 VEEKNMVFTTNVRLRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGES 593
Query: 393 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMD 566
R V ++G+V W+ I + + + +P D Q C FGS ++ ++D
Sbjct: 594 ITSSNTPRPVVRSDGTVLWMVPTVIKSSCVIDVKYFPFDQQLCKIIFGSWHYDVSKLD 651
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YALRARVSN 431
+ + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y +S
Sbjct: 45 VNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKTHVIISK 104
Query: 432 NGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVIDK---RIYSMFX 602
+GS +W + + + +P D Q C KFGS + ++D +
Sbjct: 105 DGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFGSWTYTIADVDIQASPAPVKSSKYLK 164
Query: 603 SGAWDVTALSSAVXSQ 650
S WD+ + +++ SQ
Sbjct: 165 SAEWDLMSATTSRKSQ 180
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 47.6 bits (108), Expect = 1e-05
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Frame = +3
Query: 165 RDSPPDS---KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTW 332
R S PD ++VV+L + + +++ ++ I L+ W D L +N +++
Sbjct: 68 RPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASY 126
Query: 333 LVSS----ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISM 485
+ +++W+PD L N AG D +L RV NG+V++ R+ + M
Sbjct: 127 ATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKM 186
Query: 486 QLDNWPNDMQXCTFKFGSRMHNSDEMDFVI-DKRIY 590
+ N+P D Q C S DE+ ++ D RIY
Sbjct: 187 EFRNFPMDRQSCPVTISSYFFPEDEIYYIWGDLRIY 222
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Frame = +3
Query: 270 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RARVS 428
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 429 NNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEM 563
N G W + + SM L WP D Q C KFGS + S+ M
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMKFGSLSYGSNLM 227
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 46.0 bits (104), Expect = 4e-05
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Frame = +3
Query: 270 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NN 434
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 435 GSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMD 566
G + W + T + + +P D Q C FGS +N ++D
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 191
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 44.8 bits (101), Expect = 9e-05
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 9/128 (7%)
Frame = +3
Query: 279 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 437
W D L W ++ + S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 438 SVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVID--KRIYSMFXSGA 611
V W+ ++ +++ WP D Q CT F S ++ E+ D + +
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCTLTFSSWTYDDQEIIIETDDSELTRDHLHNSQ 121
Query: 612 WDVTALSS 635
WD+ +++
Sbjct: 122 WDIINITA 129
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +3
Query: 147 LLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 311
L TY++D P D + V L L L ++ + T+ + ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 312 EW-GCSTWLVSSERLWRPDVVLLNAA 386
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
Length = 636
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 6/131 (4%)
Frame = +3
Query: 195 VNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSS--ERLWRPDV 368
V L + + H + +Q W DKRL AG+ S L S W+PD
Sbjct: 245 VQLYIQIIHVSPTLLPQEYPVQLYFHQYWTDKRL---AGKLNLSITLTGSAASNAWKPDP 301
Query: 369 VLLNAAATTA----GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFG 536
NA + D R + +G + + + + I M L ++P D Q C KFG
Sbjct: 302 YCYNARQSNMMLEDKDVNSRLSIDPDGKIFYSRGVSIVASCEMDLHDFPLDTQNCYLKFG 361
Query: 537 SRMHNSDEMDF 569
S ++ F
Sbjct: 362 SYAFTDTDIFF 372
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 386
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 246 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 380
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +3
Query: 345 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCT 524
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
Query: 525 FKFGS 539
F S
Sbjct: 86 ISFES 90
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 423 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDF--VIDKRIYS- 593
V+N G V W + S+++ WP D+Q C+ FGS + + ++ + D Y+
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGSFIFPASALNVTSLYDSSFYTD 80
Query: 594 -MFXSGAWDVTALS 632
SG WD+ +S
Sbjct: 81 RFMQSGDWDIKEVS 94
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 423 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDF--VIDKRIYS- 593
V+N G V W + S+++ WP D+Q C+ FGS + + ++ + D Y+
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGSFIFPASALNVTSLYDSSFYTD 161
Query: 594 -MFXSGAWDVTALS 632
SG WD+ +S
Sbjct: 162 RFMQSGDWDIKEVS 175
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 39.9 bits (89), Expect = 0.003
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Frame = +3
Query: 279 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AATTAGDYALRARVS--NNGS 440
W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 441 VSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNS 554
V + + I+ M+L ++P D Q C K GS +++
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQCHLKLGSYSYST 106
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 39.5 bits (88), Expect = 0.003
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 4/149 (2%)
Frame = +3
Query: 135 MIDSLLATYDRDSPP---DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSW 302
++ +L YD+ S P + VN+++ ++ + I+ES + L+ W D RL+
Sbjct: 76 VLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAH 135
Query: 303 NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPIS 482
S +W PD NA + + NG + + R +
Sbjct: 136 GYRAL-LSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQ 194
Query: 483 MQLDNWPNDMQXCTFKFGSRMHNSDEMDF 569
M L N+P D+Q C+ S + ++DF
Sbjct: 195 MDLFNFPLDVQRCSLVLESFAYTGRQIDF 223
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 434
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 435 GSVSWIKRLDISTPISMQLDNWPNDMQ 515
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect(2) = 0.016
Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 252 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 380
+++ + + W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1463 KLKQIVDLQWENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
Score = 27.9 bits (59), Expect(2) = 0.016
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 498 WPNDMQXCTFKFGSRMHNSDEMD 566
+P D Q C KFGS H+S +D
Sbjct: 1509 FPFDEQKCLLKFGSWTHDSSRLD 1531
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.1 bits (82), Expect = 0.018
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +3
Query: 111 ENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIR---ESESTVRIQADLQM 275
++ L L+ D Y+++ P D + V + + + + E + + ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 276 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 380
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 36.7 bits (81), Expect = 0.024
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 432 NGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVIDK---RIYSMFX 602
NG W+ + +++ + + +P D Q C+ KFGS ++ + +D V + +
Sbjct: 22 NGINIWLAPVLLTSSCKIDVTYFPFDEQHCSLKFGSWTYDGERLDLVSESPSGDVSKYVP 81
Query: 603 SGAWDVTALSS 635
SG WD+ + ++
Sbjct: 82 SGQWDLVSFTA 92
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 36.7 bits (81), Expect = 0.024
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 405 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVID-- 578
+ + +VS+ G W+ ++T + + +P D Q CT KFGS +++ +D
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVDIDTSPT 72
Query: 579 KRIYSMFXSGAWD 617
I +G WD
Sbjct: 73 ASIKGYQQNGEWD 85
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 36.3 bits (80), Expect = 0.031
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = +3
Query: 414 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFV-----ID 578
+A V +NG W +I + + + +P D Q C KFGS + +++F D
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGSWTYTGRQLNFTNKRNSAD 80
Query: 579 KRIYSMFXSGAWDVTA 626
+Y++ SG W + A
Sbjct: 81 LTMYTI--SGEWALVA 94
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 35.1 bits (77), Expect = 0.073
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 378 NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSD 557
N A T + + ++ N+G W I + ++ + +P D Q C KFGS +N
Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGSWTYNGL 64
Query: 558 EMDFV 572
E++ V
Sbjct: 65 EVNIV 69
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 33.1 bits (72), Expect = 0.29
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 186 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 362
K +V LH + A + S S VR+ +++ W + L WN ++ G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 363 DVVLLN 380
D+VL N
Sbjct: 127 DIVLYN 132
>SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26)
Length = 360
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +3
Query: 465 ISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVIDKR 584
+ T ++ + ++P D Q C FGS H+ +E++ + D++
Sbjct: 5 VVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRK 44
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -1
Query: 462 PSALSRRRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCR 283
P + R +SR H R + R+ L+ + PR S+ T K SP+ R S R
Sbjct: 275 PPSEERPKSRLYRHSRSKSKERKTLKSPIRSPRGQSSRERNTKRKSKSPSLERRRSRARR 334
Query: 282 SNSFE 268
S S E
Sbjct: 335 SRSIE 339
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 420 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFK 530
R+ NG++ + RL +++ M L N+P D Q C K
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK 100
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 374
W + L+WN E+G T VS +W PD+VL
Sbjct: 53 WYNPLLTWNVTEYGGLKTINVSPTIIWLPDIVL 85
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +3
Query: 351 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQX 518
LW PD NA + + D + + ++ +GS+ + + I M L ++P D Q
Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76
Query: 519 CTFKFGSRMHNSDEM 563
C FGS + +++
Sbjct: 77 CNLVFGSYGYTDNDI 91
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 279 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 380
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +3
Query: 351 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQX 518
LW PD NA + + D + + ++ +GS+ + + I M L ++P D Q
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203
Query: 519 CTFKFGSRMHNSDEM 563
C FGS + +++
Sbjct: 204 CNLVFGSYGYTDNDI 218
>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
Length = 75
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +3
Query: 423 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMD 566
+ + G + W + T + + +P D Q C FGS +N ++D
Sbjct: 19 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 66
>SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05)
Length = 109
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 429 NNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVIDKR---IYSMF 599
N G++ W + + + + +P D Q C+ FGS + S+ + I ++ +
Sbjct: 12 NTGAIEWYAPTLVKSICKIDITYFPFDKQNCSLVFGSWTYTSEFLSLDIKQKEPDLSKYT 71
Query: 600 XSGAWDV 620
+G W++
Sbjct: 72 PNGQWEM 78
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 216 RHANIRESEST-VRIQADLQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 380
R+++ ++S++ + + W D L WN G V +W PD+ L+N
Sbjct: 10 RYSSCQDSKAQELTTNLRIYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 678 PREXPPRHGXGXAPHWTEPSH 616
PR PRH G PHW +P H
Sbjct: 906 PRYGAPRH-MGPPPHWVQPGH 925
>SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32)
Length = 363
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 423 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVIDKR---IYS 593
+ ++G+ SW +I + + + +P D Q C FGS + + ++ V + +
Sbjct: 10 IDSDGTNSWYAPTEIKSICQIDITYFPFDAQSCPIIFGSWTYTGNYLNLVNARNQSDLSK 69
Query: 594 MFXSGAWDV 620
SG W++
Sbjct: 70 YTISGEWEL 78
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 327 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 437
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 29.1 bits (62), Expect = 4.8
Identities = 32/160 (20%), Positives = 66/160 (41%), Gaps = 9/160 (5%)
Frame = +3
Query: 111 ENATSLSLMIDSLLATYDRDSPP---DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMN 278
E A + + +D L ++ D+ P +VV + +++ + I + ++ +
Sbjct: 42 EYAKNTTKTLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQT 101
Query: 279 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSV 443
W D RL+++ E + +W PD + N ++T +Y L + NG+
Sbjct: 102 WHDPRLAFDLPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158
Query: 444 SWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEM 563
R+ ++ M L +P D Q C S ++D +
Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTCYLNIMSYSGSTDNL 198
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 429 NNGSVSWIKRLDISTPISMQLDNWPNDMQXCTFKFGSRMHNSDEMD 566
+NG+ W + + +++ +P D Q C KFGS H+ +D
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGSFSHDITTLD 252
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +3
Query: 345 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 515
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 516 XC 521
C
Sbjct: 92 VC 93
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -2
Query: 464 VQALYPGDGAVIRYTGAESVVPGGGCSRV*QYHVRP-PQAFRGHQPSAAAP-LPCVPTQS 291
VQ + DG + Y S VP G S + V+P QA G +P A P +P T +
Sbjct: 1172 VQQVSASDGLCVTYAVGPSAVPAGIPSTLLLTGVKPVQQASSGVRPVAVTPRIPVTLTPN 1231
Query: 290 FVDP 279
+ P
Sbjct: 1232 AIRP 1235
>SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29)
Length = 355
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +3
Query: 471 TPISMQLDNWPNDMQXCTFKFGSRMHNSDEMDFVIDKRIYSM----FXSGAWDV 620
T + + ++P D Q C FG+ ++ +E++ + +KR+ ++ +G W V
Sbjct: 7 TMCKIDVTDFPFDSQRCPITFGAWQYDQNEVNLINNKRLATVASTRVENGEWTV 60
>SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24)
Length = 540
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +2
Query: 110 RKRNIIVPHDRLAPRNVRSGLPPRLQNRSQPDPTFETC*HS*VRVHRANTGRSSNELDRQ 289
R+ N H R A + SG P R SQ T HS VR R N G S+ DR+
Sbjct: 425 RQTNPARNHHRSASVSNMSGPPRRGTGASQVGRP-RTSTHSDVRESRDNPGMKSDSRDRE 483
Query: 290 TTELE 304
+ + E
Sbjct: 484 SRDSE 488
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,346,274
Number of Sequences: 59808
Number of extensions: 543270
Number of successful extensions: 1506
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -