Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_D14
(843 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0060 + 6446317-6446871,6447836-6448276,6449035-6449265,644... 32 0.66
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 31 0.87
09_04_0025 - 13882424-13882657 31 1.5
02_02_0058 - 6423776-6423850,6424302-6424379,6426096-6426156,642... 31 1.5
02_03_0155 + 15805683-15805743,15805824-15806105,15808293-158089... 30 2.0
01_06_0901 - 32849722-32849745,32849788-32849856,32850817-328509... 30 2.7
05_01_0126 + 858259-858489,858641-859189,859545-860162 29 3.5
11_06_0742 - 26841041-26841314,26841678-26841775 29 4.6
06_03_0404 - 20460555-20462135 29 4.6
06_01_0743 - 5534743-5534985,5535075-5535172,5535286-5535429,553... 29 4.6
05_07_0236 - 28582157-28582552,28582639-28582911,28583324-285835... 29 4.6
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 29 4.6
12_02_1113 - 26165074-26165889,26166077-26166202,26166294-261664... 29 6.1
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 29 6.1
08_01_0101 + 725972-726200,726407-726675,726927-727049,727742-72... 29 6.1
11_06_0579 - 25181389-25182289,25182556-25182584 28 8.1
06_01_0190 + 1475240-1475633,1475720-1476237 28 8.1
>02_02_0060 +
6446317-6446871,6447836-6448276,6449035-6449265,
6449382-6449473,6449555-6449615,6451541-6451618,
6451853-6452014
Length = 539
Score = 31.9 bits (69), Expect = 0.66
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 680 PTIQFEAEVPKTGHPDPDADASD 612
P++QFE +P+T P+PD D D
Sbjct: 394 PSVQFEERIPETKLPEPDEDQDD 416
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 701 KVSAEVPPTIQFEAEVPKTGHPDPDADASDH-EVGTQRRRSSR 576
KV +PP Q A PK HP P D DH +VG ++++
Sbjct: 208 KVRFALPPQQQRAAASPKALHPSPKRDVVDHNKVGPSAEKATK 250
>09_04_0025 - 13882424-13882657
Length = 77
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 488 SAGSAVVTRIRRLGLEGGAR-QNPGPVVS-RAGTSAASGC 601
+AG AV RRLG +GG R Q P P+VS +S SGC
Sbjct: 22 NAGVAVAAA-RRLGEDGGGRRQQPPPLVSVSKASSGPSGC 60
>02_02_0058 -
6423776-6423850,6424302-6424379,6426096-6426156,
6426239-6426330,6426440-6426670,6427510-6427950,
6429037-6429591
Length = 510
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 680 PTIQFEAEVPKTGHPDPDADASD 612
P++QF+ +P+T P+PD D D
Sbjct: 394 PSVQFQERIPETKLPEPDEDQED 416
>02_03_0155 +
15805683-15805743,15805824-15806105,15808293-15808959,
15809440-15810490
Length = 686
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Frame = +1
Query: 382 IVRRFGGLDSSP---WSVARAAAKSDKIRKKLRWAWKQLRRFSRRHKDPTAGTRRWRSTK 552
+ R GG++ + W V A A + + W K+ + + + G RRWR K
Sbjct: 204 LAMRCGGVEETGVGVWGVGAATAARRRGIAVMGWTTKEREKAAASRGSWSVGRRRWRRGK 263
Query: 553 -PRPCCFTGRDERRLWVP 603
R GR W+P
Sbjct: 264 WRRGLGGVGRRTEEAWIP 281
>01_06_0901 -
32849722-32849745,32849788-32849856,32850817-32850927,
32851002-32851259
Length = 153
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -3
Query: 391 ASQ*GPGWSLAPMGSLSRRPELRRDNMPWAHPPVALATVRLLSGFGH 251
AS P S++P + ++RP L D+ PW A +R + H
Sbjct: 20 ASTTAPASSVSPAAAAAKRPHLAGDDAPWRAAATGAAGIRPVPRIHH 66
>05_01_0126 + 858259-858489,858641-859189,859545-860162
Length = 465
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/80 (30%), Positives = 33/80 (41%)
Frame = +2
Query: 317 ITPQFRTAA*RSHRCERPSRTSL*GVSGGSTRHHGQWQEPPPNLIRFVRNCGGPGNSSAG 496
I+ R+++ SH R S G S G + +W +PPP C G G +
Sbjct: 268 ISGVIRSSSSSSHSRSRSSE----GSSSGQHQRQSRWDQPPPPPC-----CSGCGTTHRV 318
Query: 497 SAVVTRIRRLGLEGGARQNP 556
V+T RL G A NP
Sbjct: 319 EWVMTCCHRLLCVGCAEVNP 338
>11_06_0742 - 26841041-26841314,26841678-26841775
Length = 123
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 283 LRLPADVPKAYYHAAVQDGGLAIPSVRATIPDLIVRRFGGLDSSPWSVARAAAKSDKIRK 462
+R P D A V D + P+ A +PDL++ R LD SP + + A + RK
Sbjct: 57 IRRPGDHRWPEMEANVTDRAASSPNRAAALPDLVILRL--LDGSPARPSLSQASAYPERK 114
Query: 463 KL 468
++
Sbjct: 115 RM 116
>06_03_0404 - 20460555-20462135
Length = 526
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 211 VFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPS 357
VF + LR + V R+A W+ A V + YY A D GLA P+
Sbjct: 124 VFAVVDLAGLRSVRVN-RRAATAWVDSGATVGEMYYAVAKADAGLAFPA 171
>06_01_0743 -
5534743-5534985,5535075-5535172,5535286-5535429,
5535594-5535643,5535733-5535787,5536595-5536686,
5536758-5536806,5536883-5537079,5537160-5537302,
5537625-5537777,5537848-5537896,5537974-5538071,
5538172-5538327,5538434-5538791,5538873-5538943,
5539134-5539217,5539307-5539468,5539534-5539677,
5539769-5540004,5540990-5541374
Length = 988
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 495 VQPSSQGSDGWDSKVALDKTQALLFHGPGRAPPLGAH 605
V+ + +G D D ++ ++ A + PGR PP G H
Sbjct: 627 VEGACKGMDTSDPRLGALRSPASILQSPGRLPPRGPH 663
>05_07_0236 -
28582157-28582552,28582639-28582911,28583324-28583560,
28583653-28583694,28583782-28583964,28584393-28584524,
28585605-28586057
Length = 571
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 152 GLRGALEMLFRALLILCSNVTHPEASKSTPRYRHRSTQLTCL 27
G++G +L LL+LCSNV+ +A ++R++ T L
Sbjct: 4 GIKGLTFLLLLVLLVLCSNVSLSDARSGKHWRQNRASSSTLL 45
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 477 LETAPQVQPSSQGSDGWDSKVALDKTQALLFHGPGRAPPLGAH 605
+ AP ++ G DG SK+A+D + L +AP + H
Sbjct: 194 MHIAPSLEQPHFGHDGQSSKIAVDPSDQPLEFNSRKAPDMAVH 236
>12_02_1113 -
26165074-26165889,26166077-26166202,26166294-26166457,
26166539-26166576,26166670-26166885,26166984-26167145,
26167212-26167497,26167585-26167761,26167864-26167971,
26168076-26168175,26168283-26168359,26168608-26168803,
26169032-26169363,26169476-26169589,26169651-26169753
Length = 1004
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 482 NSSAGSAVVTRIRRLGLEGGARQNP 556
N+ AG A T+ RR+ L GGA Q P
Sbjct: 829 NNPAGGAQPTKARRVSLCGGAHQQP 853
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 406 DSSPWSVARAAAKSDKIRKKLRWAWKQLRRFSRR 507
D S W R+ K++ +RKK + ++K R++RR
Sbjct: 768 DMSEWKQGRSLKKNNVMRKKSKNSFKSKSRYNRR 801
>08_01_0101 +
725972-726200,726407-726675,726927-727049,727742-728248
Length = 375
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 430 RAAAKSDKIRKKLRWAWKQLRRFSRRHKDPTAGTRRWRSTKPRPC 564
+A A + +K+ A RR RRH+ P + RR ST R C
Sbjct: 274 QARATASAAKKQAATAAAAKRRHPRRHRRPWSLQRRRHSTSSRVC 318
>11_06_0579 - 25181389-25182289,25182556-25182584
Length = 309
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +1
Query: 418 WSVARAAAKSDKIRKKLRWAWKQLRRFSRRHKDP----TAGTRRWRSTKPRPCCFTGRDE 585
W+ + +A K D R WA + ++R+ P TAGT P + R +
Sbjct: 81 WATSTSANKLDLTRFHGEWAQRWVKRYYHHEAPPPFEFTAGTSDEEQASASP---SARAQ 137
Query: 586 RRLWV 600
R LW+
Sbjct: 138 RALWI 142
>06_01_0190 + 1475240-1475633,1475720-1476237
Length = 303
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -2
Query: 485 CFQ--AHRSFLRILSDLAAALATDHGDESSPP 396
CF AH S LR ++DLA A+A D GDE P
Sbjct: 103 CFHPLAHAS-LRHVADLAGAVAADIGDELQVP 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,033,695
Number of Sequences: 37544
Number of extensions: 612551
Number of successful extensions: 2301
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2298
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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