Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_D14
(843 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 103 2e-22
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 36 0.053
AY118375-1|AAM48404.1| 530|Drosophila melanogaster RE18723p pro... 31 1.5
BT003625-1|AAO39628.1| 733|Drosophila melanogaster GH01001p pro... 30 3.5
BT001806-1|AAN71561.1| 703|Drosophila melanogaster RH30075p pro... 30 3.5
AE013599-1016|AAF58846.1| 703|Drosophila melanogaster CG2269-PC... 30 3.5
AE013599-1015|AAM71058.1| 703|Drosophila melanogaster CG2269-PA... 30 3.5
AE013599-1014|AAM71057.1| 783|Drosophila melanogaster CG2269-PB... 30 3.5
BT028848-1|ABI34229.2| 364|Drosophila melanogaster RT01116p pro... 29 6.0
BT028815-1|ABI34196.2| 364|Drosophila melanogaster RT01016p pro... 29 6.0
AF086816-1|AAC35369.1| 396|Drosophila melanogaster POU domain t... 29 6.0
AE014298-2138|AAF48447.2| 396|Drosophila melanogaster CG9151-PA... 29 6.0
AE014298-2137|AAX52498.1| 394|Drosophila melanogaster CG9151-PD... 29 6.0
AE014298-2136|AAN09663.1| 375|Drosophila melanogaster CG9151-PB... 29 6.0
AE014298-2135|AAX52497.1| 368|Drosophila melanogaster CG9151-PC... 29 6.0
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 103 bits (248), Expect = 2e-22
Identities = 54/133 (40%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
Frame = +1
Query: 13 GGKPLRQVSCVERWRYLGVDFEASGCVTLE--HSISSALNNISRAPLKPQQRLEILRAHL 186
G + + + W+YLG++F A+G V I L +++APLKPQQRL LR L
Sbjct: 640 GSSEIPSLKRTDEWKYLGINFTATGRVRCNPAEDIGPKLQRLTKAPLKPQQRLFALRTVL 699
Query: 187 IPRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRA 366
IP+ H G+++ LR D IR V +WL LP DVP A+ HA + GGL IPS+R
Sbjct: 700 IPQLYHKLALGSVAIGVLRKTDKLIRYYVRRWLNLPLDVPIAFVHAPPKSGGLGIPSLRW 759
Query: 367 TIPDLIVRRFGGL 405
P L +RR +
Sbjct: 760 VAPMLRLRRLSNI 772
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 36.3 bits (80), Expect = 0.053
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 669 LDGRWNFRAHFAKLGPRLMATXGSLXRLLPNVXGPDQVARRL 794
+D R +F+AH + T +L R++PNV GP ARRL
Sbjct: 724 IDRRLSFKAHARYASKKAAMTAAALARIMPNVGGPRLPARRL 765
>AY118375-1|AAM48404.1| 530|Drosophila melanogaster RE18723p
protein.
Length = 530
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 58 YLGVDFEASGCVTLEHSISSALNNISRAPLKPQQRLEILRAHLIPRFQHGFVFGNISDDR 237
++ VD ++S C ++E + +S +N S P ++ + HL F F IS R
Sbjct: 440 FMDVDSQSSQCPSVERNFASPRSNCSTVDSIPPMQMGQNQTHLYLPDATNFTFNGIS-HR 498
Query: 238 LRMLDVQ 258
LR + VQ
Sbjct: 499 LRPIAVQ 505
>BT003625-1|AAO39628.1| 733|Drosophila melanogaster GH01001p
protein.
Length = 733
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 635 DPDADASDHEVGTQRRRSSRPVKQ-QGLGFVERHLRVPAVGSL 510
D +AD EV QRR+ R G G +H+ P VG L
Sbjct: 362 DGEADLETEEVDEQRRKKKRAAASLSGNGGGNKHIHAPTVGHL 404
>BT001806-1|AAN71561.1| 703|Drosophila melanogaster RH30075p
protein.
Length = 703
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 635 DPDADASDHEVGTQRRRSSRPVKQ-QGLGFVERHLRVPAVGSL 510
D +AD EV QRR+ R G G +H+ P VG L
Sbjct: 332 DGEADLETEEVDEQRRKKKRAAASLSGNGGGNKHIHAPTVGHL 374
>AE013599-1016|AAF58846.1| 703|Drosophila melanogaster CG2269-PC,
isoform C protein.
Length = 703
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 635 DPDADASDHEVGTQRRRSSRPVKQ-QGLGFVERHLRVPAVGSL 510
D +AD EV QRR+ R G G +H+ P VG L
Sbjct: 332 DGEADLETEEVDEQRRKKKRAAASLSGNGGGNKHIHAPTVGHL 374
>AE013599-1015|AAM71058.1| 703|Drosophila melanogaster CG2269-PA,
isoform A protein.
Length = 703
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 635 DPDADASDHEVGTQRRRSSRPVKQ-QGLGFVERHLRVPAVGSL 510
D +AD EV QRR+ R G G +H+ P VG L
Sbjct: 332 DGEADLETEEVDEQRRKKKRAAASLSGNGGGNKHIHAPTVGHL 374
>AE013599-1014|AAM71057.1| 783|Drosophila melanogaster CG2269-PB,
isoform B protein.
Length = 783
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 635 DPDADASDHEVGTQRRRSSRPVKQ-QGLGFVERHLRVPAVGSL 510
D +AD EV QRR+ R G G +H+ P VG L
Sbjct: 412 DGEADLETEEVDEQRRKKKRAAASLSGNGGGNKHIHAPTVGHL 454
>BT028848-1|ABI34229.2| 364|Drosophila melanogaster RT01116p
protein.
Length = 364
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -2
Query: 641 HPDPDADASDHEVGTQR---RRSSRPVKQQGLGFVERHLRVPAVGSL 510
HPD D D + E +R RR V Q +G +L++P VG+L
Sbjct: 190 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL 236
>BT028815-1|ABI34196.2| 364|Drosophila melanogaster RT01016p
protein.
Length = 364
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -2
Query: 641 HPDPDADASDHEVGTQR---RRSSRPVKQQGLGFVERHLRVPAVGSL 510
HPD D D + E +R RR V Q +G +L++P VG+L
Sbjct: 190 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL 236
>AF086816-1|AAC35369.1| 396|Drosophila melanogaster POU domain
transcription factor protein.
Length = 396
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -2
Query: 641 HPDPDADASDHEVGTQR---RRSSRPVKQQGLGFVERHLRVPAVGSL 510
HPD D D + E +R RR V Q +G +L++P VG+L
Sbjct: 220 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL 266
>AE014298-2138|AAF48447.2| 396|Drosophila melanogaster CG9151-PA,
isoform A protein.
Length = 396
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -2
Query: 641 HPDPDADASDHEVGTQR---RRSSRPVKQQGLGFVERHLRVPAVGSL 510
HPD D D + E +R RR V Q +G +L++P VG+L
Sbjct: 220 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL 266
>AE014298-2137|AAX52498.1| 394|Drosophila melanogaster CG9151-PD,
isoform D protein.
Length = 394
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -2
Query: 641 HPDPDADASDHEVGTQR---RRSSRPVKQQGLGFVERHLRVPAVGSL 510
HPD D D + E +R RR V Q +G +L++P VG+L
Sbjct: 220 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL 266
>AE014298-2136|AAN09663.1| 375|Drosophila melanogaster CG9151-PB,
isoform B protein.
Length = 375
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -2
Query: 641 HPDPDADASDHEVGTQR---RRSSRPVKQQGLGFVERHLRVPAVGSL 510
HPD D D + E +R RR V Q +G +L++P VG+L
Sbjct: 201 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL 247
>AE014298-2135|AAX52497.1| 368|Drosophila melanogaster CG9151-PC,
isoform C protein.
Length = 368
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -2
Query: 641 HPDPDADASDHEVGTQR---RRSSRPVKQQGLGFVERHLRVPAVGSL 510
HPD D D + E +R RR V Q +G +L++P VG+L
Sbjct: 194 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL 240
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,695,610
Number of Sequences: 53049
Number of extensions: 935046
Number of successful extensions: 3063
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3060
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -