Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D14
         (843 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.66 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.66 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   3.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   3.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   3.5  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 464 NCGGPGNSSAGSAV 505
           N GGPG+SSAG  V
Sbjct: 18  NLGGPGSSSAGGVV 31



 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +1

Query: 238 LRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQ 333
           L ++ V +  + G+WL     +PK   +A+V+
Sbjct: 62  LSLVVVTVAISTGEWLLTEEKLPKTSSNASVE 93


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = +1

Query: 472  WAWKQLR-RFSRRHKDPTAGTRRWRSTKPRPCCFTGRDER 588
            WA+ +   RF R     ++G     S  P P CF    ER
Sbjct: 1025 WAYSKYGLRFLRAKPGKSSGAAAMASAAPMPACFDSDRER 1064


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 237 IENARCPNPESSRTVAK 287
           I N RC NP++ RT  K
Sbjct: 411 ILNTRCENPDNDRTPFK 427


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 237 IENARCPNPESSRTVAK 287
           I N RC NP++ RT  K
Sbjct: 411 ILNTRCENPDNDRTPFK 427


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 237 IENARCPNPESSRTVAK 287
           I N RC NP++ RT  K
Sbjct: 411 ILNTRCENPDNDRTPFK 427


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,164
Number of Sequences: 438
Number of extensions: 4858
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)