Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_D06
(905 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 192 1e-47
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 189 1e-46
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 158 2e-37
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 157 3e-37
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 156 6e-37
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 155 2e-36
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 152 1e-35
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 151 2e-35
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 148 2e-34
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 147 3e-34
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 146 5e-34
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 137 4e-31
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 137 4e-31
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 131 2e-29
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 127 4e-28
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 121 2e-26
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 94 4e-18
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 82 2e-14
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 82 2e-14
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 3e-12
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 74 4e-12
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 61 3e-08
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 60 8e-08
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 57 7e-07
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 55 3e-06
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 54 5e-06
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 46 0.001
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 46 0.002
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 45 0.002
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 43 0.009
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 43 0.012
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.016
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 42 0.029
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 40 0.066
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 37 0.62
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.9
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 3.3
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 5.7
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 34 5.7
UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya C... 33 7.6
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 33 7.6
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 192 bits (467), Expect = 1e-47
Identities = 94/166 (56%), Positives = 108/166 (65%)
Frame = +2
Query: 92 SVYSEKSETVQGCSQAXXXXXXXXXXXXDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 271
SVYSEK E+ D+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 9 SVYSEKGES--SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 272 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 451
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 452 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 589
++GH IE++PELPLVV DKV+ KTK+AV+ L+
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLK 172
Score = 43.6 bits (98), Expect = 0.007
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1
Query: 631 SXRLRAGXGKMRNRRPIQR*GGPHNLSPRNQGSXXAPFRNIPGV 762
S R+RAG GKMRNRR IQR GP + + G A FRNIPG+
Sbjct: 186 SQRMRAGKGKMRNRRRIQR-RGPCIIYNEDNGIIKA-FRNIPGI 227
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 189 bits (460), Expect = 1e-46
Identities = 92/166 (55%), Positives = 111/166 (66%)
Frame = +2
Query: 92 SVYSEKSETVQGCSQAXXXXXXXXXXXXDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 271
SVY+EK+E + D+VN+VH + +N+RQ Y VS+ AGHQTSAES
Sbjct: 11 SVYTEKNEPAKD-KNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAES 69
Query: 272 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 451
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 70 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVS 129
Query: 452 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 589
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLR
Sbjct: 130 AIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLR 175
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 158 bits (383), Expect = 2e-37
Identities = 73/126 (57%), Positives = 84/126 (66%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
D+V VH M+KN RQPY VS++AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGN
Sbjct: 34 DIVQTVHTGMAKNKRQPYAVSEKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGN 93
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
MCR GRMFAPTK WR+WH ARGH I ++ E+PLV+
Sbjct: 94 MCRSGRMFAPTKVWRKWHQKINLGQKRFATVSALAASGVPALLFARGHQISEVAEVPLVI 153
Query: 536 ADKVQE 553
+V E
Sbjct: 154 NSEVFE 159
Score = 33.9 bits (74), Expect = 5.7
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 631 SXRLRAGXGKMRNRRPIQR*GGPHNLSPRNQGSXXA-PFRNIPGVGT 768
S +LRAG GK+R RR QR G G FRN+PGV T
Sbjct: 188 SRKLRAGKGKLRGRRHRQRRGPLVVYDGATDGKELVRAFRNLPGVET 234
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 157 bits (382), Expect = 3e-37
Identities = 81/167 (48%), Positives = 98/167 (58%)
Frame = +2
Query: 92 SVYSEKSETVQGCSQAXXXXXXXXXXXXDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 271
SVYS S++V G D+V VH +M+KNSRQ Y V++ +G SA S
Sbjct: 8 SVYSASSDSVVGT--CPLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSAHS 65
Query: 272 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 451
WGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 66 WGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVS 125
Query: 452 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRA 592
+RGH I +PE+PLVV D +Q KTK+A+ FL+A
Sbjct: 126 ALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKA 172
Score = 39.1 bits (87), Expect = 0.15
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +1
Query: 619 RCTRSXRLRAGXGKMRNRRPIQR*GGPHNLSPRNQGSXXAPFRNIPGV 762
R S +RAG GKMRNRR + R GP + P N+G+ FRNI G+
Sbjct: 181 RVNDSREIRAGRGKMRNRRYVAR-RGPMLVMPNNKGT--RAFRNIFGL 225
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 156 bits (379), Expect = 6e-37
Identities = 72/137 (52%), Positives = 89/137 (64%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
DLV VH +MSKN RQ Y VSK +G+QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N
Sbjct: 34 DLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYAN 93
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
CR G M+APT+ WRRWH +RGH IE + E+P+VV
Sbjct: 94 FCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRGHRIEALREVPMVV 153
Query: 536 ADKVQEINKTKQAVIFL 586
D +++INKTK AV L
Sbjct: 154 DDAIEQINKTKDAVKLL 170
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 155 bits (375), Expect = 2e-36
Identities = 76/138 (55%), Positives = 88/138 (63%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
DLV V +MSKN RQ Y VS +AGHQ SAESWGTGRAVARIPRV GT RSGQGAFGN
Sbjct: 36 DLVRYVFTNMSKNKRQAYGVSTKAGHQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGN 95
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
MCRGG MF+P K +RR+H ARGH I +PELPLV+
Sbjct: 96 MCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPSLVMARGHRINNVPELPLVI 155
Query: 536 ADKVQEINKTKQAVIFLR 589
++++Q INKT AV F +
Sbjct: 156 SNEIQNINKTSTAVEFFK 173
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 152 bits (369), Expect = 1e-35
Identities = 68/139 (48%), Positives = 88/139 (63%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
DLV+ VH +MSKN RQ Y +S+ +G+QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N
Sbjct: 34 DLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYAN 93
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
CR G MFAPT+ WR WH +RGH +E +PELPLV+
Sbjct: 94 FCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSVAATASVPLVMSRGHRVESVPELPLVL 153
Query: 536 ADKVQEINKTKQAVIFLRA 592
D ++ + KT+ AV L +
Sbjct: 154 DDTMETLTKTRDAVELLNS 172
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 151 bits (367), Expect = 2e-35
Identities = 72/105 (68%), Positives = 79/105 (75%)
Frame = +2
Query: 95 VYSEKSETVQGCSQAXXXXXXXXXXXXDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 274
VY++KSE +Q D+V+ VH + KN RQPY VS EAGHQTSAESW
Sbjct: 127 VYNDKSEPTD--TQIRLPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESW 184
Query: 275 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 185 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 148 bits (358), Expect = 2e-34
Identities = 70/138 (50%), Positives = 86/138 (62%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
D+V+ VH +++KN RQ + V+ +AG Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN
Sbjct: 36 DIVSFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGN 95
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
CR GRM P K WRRWH ARGH I ++P++PLVV
Sbjct: 96 QCRKGRMSLPIKVWRRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQVPQIPLVV 155
Query: 536 ADKVQEINKTKQAVIFLR 589
DK++ KT A+ FL+
Sbjct: 156 EDKIESYEKTTDALNFLK 173
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 147 bits (357), Expect = 3e-34
Identities = 71/137 (51%), Positives = 85/137 (62%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
DL+ + +MSKN R PY V AG++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGN
Sbjct: 35 DLIEYIFSNMSKNIRHPYAVKLGAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGN 94
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
MCRGG MF PTK WRRW ARGH I + E+PLV
Sbjct: 95 MCRGGGMFNPTKIWRRWGRKINLKEKRYAVCSSIAASGITSLVLARGHRISNLKEVPLVA 154
Query: 536 ADKVQEINKTKQAVIFL 586
++ ++ + KTK A+ FL
Sbjct: 155 SNDIESMQKTKDALKFL 171
Score = 34.3 bits (75), Expect = 4.3
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +1
Query: 619 RCTRSXRLRAGXGKMRNRRPIQR*GGPHNLSPRNQGSXXAPFRNIPGV 762
R +S +LRA GKMRNR+ + GP + + G A FRNIPGV
Sbjct: 182 RLIKSXKLRARXGKMRNRK-YKISNGPLIIYSXDSGIKKA-FRNIPGV 227
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 146 bits (355), Expect = 5e-34
Identities = 70/139 (50%), Positives = 88/139 (63%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
D+V+ VH++++KN RQP+ AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ AF N
Sbjct: 35 DVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGSGTSRNGQAAFAN 94
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
RGG M++P K WRRWH ARGH I+ +PELPLVV
Sbjct: 95 SARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLARGHKIDNVPELPLVV 154
Query: 536 ADKVQEINKTKQAVIFLRA 592
+D V++I KTK+AV L A
Sbjct: 155 SDDVEQIKKTKEAVKVLAA 173
Score = 35.1 bits (77), Expect = 2.5
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = +1
Query: 631 SXRLRAGXGKMRNRRPIQR*GGPHNLSPRNQGSXXAPFRNIPGVGTS 771
S R+R G GK RNRR QR G + +N+G A FRNI GV S
Sbjct: 186 SKRIRVGSGKARNRRYTQR-RGVLIVHDQNEGLANA-FRNISGVDIS 230
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 137 bits (331), Expect = 4e-31
Identities = 64/137 (46%), Positives = 81/137 (59%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G GTHRSGQGA N
Sbjct: 30 DIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIAN 89
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
CRGGR+F PT WR+WH +RG+ ++ IPE+P V+
Sbjct: 90 FCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYRVKTIPEIPFVI 149
Query: 536 ADKVQEINKTKQAVIFL 586
D +++I KT+ + L
Sbjct: 150 EDSIEKIPKTRDLIKIL 166
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 137 bits (331), Expect = 4e-31
Identities = 66/131 (50%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Frame = +2
Query: 209 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 388
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 389 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV---QEIN 559
K WR+WH ARGH + +PE+PLV++ I
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIR 141
Query: 560 KTKQAVIFLRA 592
KT AV L+A
Sbjct: 142 KTSAAVALLKA 152
Score = 40.3 bits (90), Expect = 0.066
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 619 RCTRSXRLRAGXGKMRNRRPIQR*GGPHNLSPRNQGSXXA-PFRNIPGVGTS 771
+ S +LRAG GK+R RR QR G +P G FRNIPGV TS
Sbjct: 161 KAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIPGVETS 212
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 131 bits (317), Expect = 2e-29
Identities = 66/138 (47%), Positives = 79/138 (57%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
DLV + +RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N
Sbjct: 32 DLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGGTRRAGQGAFAN 91
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
CR GRM PTK RRW +ARGH I + LP++V
Sbjct: 92 FCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLVEARGHRISDVKMLPIIV 151
Query: 536 ADKVQEINKTKQAVIFLR 589
+D + + KTK AV LR
Sbjct: 152 SDDIAKARKTKDAVEILR 169
Score = 33.9 bits (74), Expect = 5.7
Identities = 22/48 (45%), Positives = 25/48 (52%)
Frame = +1
Query: 619 RCTRSXRLRAGXGKMRNRRPIQR*GGPHNLSPRNQGSXXAPFRNIPGV 762
R +S +R G GKMRNRR QR G L + S FRNI GV
Sbjct: 179 RVEKSRGVRCGKGKMRNRRYTQRKG---ILIVHGESSEMLGFRNIRGV 223
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 127 bits (306), Expect = 4e-28
Identities = 67/139 (48%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
D+V+ V+ + SKN+RQP VS +AG Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGN
Sbjct: 35 DVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGN 94
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
M R G MF+P K +R+W ARGH I +P++PLVV
Sbjct: 95 MTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHHIAGVPQIPLVV 154
Query: 536 ADK-VQEINKTKQAVIFLR 589
K + I KTKQAV L+
Sbjct: 155 NSKSISVIKKTKQAVYLLK 173
Score = 34.3 bits (75), Expect = 4.3
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1
Query: 616 LRCTRSXRLRAGXGKMRNRRPIQR*GGPHNLSPRNQGSXXAPFRNIPGVGT 768
L+ S +RAG GKMR R+ I+ GP + + FRNIPGV T
Sbjct: 182 LKVIASKTVRAGQGKMRGRK-IKERKGPLVVYGNDDLQAVKAFRNIPGVDT 231
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 121 bits (292), Expect = 2e-26
Identities = 57/138 (41%), Positives = 82/138 (59%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
++V +V+V+++KN++QP+ AG + SA SWGTGRA A +PRV G G++R+GQGA+ N
Sbjct: 32 EVVKEVYVNLAKNAQQPHANDPMAGKKVSAISWGTGRAKACVPRVNGSGSNRNGQGAYAN 91
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
CRGG F P RRW QARGH++ ++ E+P+VV
Sbjct: 92 FCRGGHRFNPPTLLRRWFRPVPSRQRKFAIASAIAATAVVPLVQARGHVLGEVKEVPIVV 151
Query: 536 ADKVQEINKTKQAVIFLR 589
D VQEI +T+ AV L+
Sbjct: 152 VDAVQEIKRTRDAVELLK 169
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 94.3 bits (224), Expect = 4e-18
Identities = 54/139 (38%), Positives = 68/139 (48%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
D++N VH + K R PY VS+ AG Q +A SWG GRAVAR+PR G G GA+ N
Sbjct: 31 DIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWGPGRAVARLPRKHG------GIGAYAN 84
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
RGG M PT RRW +ARGH I +P +PLVV
Sbjct: 85 FARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAASANAALVEARGHRIADVPSIPLVV 144
Query: 536 ADKVQEINKTKQAVIFLRA 592
+ KTK A+ ++A
Sbjct: 145 --DTDNVTKTKDALAIIKA 161
Score = 40.3 bits (90), Expect = 0.066
Identities = 25/48 (52%), Positives = 27/48 (56%)
Frame = +1
Query: 619 RCTRSXRLRAGXGKMRNRRPIQR*GGPHNLSPRNQGSXXAPFRNIPGV 762
RC S +RAG GKMRNRR I R GP L N FRN+PGV
Sbjct: 170 RCKDSRHIRAGRGKMRNRRYITR-KGP--LVIYNTEDVARGFRNLPGV 214
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 82.2 bits (194), Expect = 2e-14
Identities = 36/115 (31%), Positives = 61/115 (53%)
Frame = +2
Query: 245 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 424
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 425 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 589
+RGH ++ + P+++ ++ I + ++ L+
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSELLMLLK 173
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 82.2 bits (194), Expect = 2e-14
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
DL+ ++ N RQPY AG +TSAESWG G VA +PRV+G +G+ A
Sbjct: 29 DLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVA 88
Query: 356 MCRGG-RMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLV 532
GG + APT P + W + RGH+I+ +P LP+V
Sbjct: 89 QAVGGQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPEFVKERGHVIDDVPHLPVV 147
Query: 533 VADKVQEINKTKQAVIFLRA 592
V D+++ +NK ++ F ++
Sbjct: 148 VVDELKSLNKAREVREFFKS 167
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 3e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 322
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 37.9 bits (84), Expect = 0.35
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1
Query: 631 SXRLRAGXGKMRNRRPIQR*G 693
S R+RAG GKMRNRRPIQR G
Sbjct: 127 SQRMRAGKGKMRNRRPIQRRG 147
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 74.1 bits (174), Expect = 4e-12
Identities = 44/133 (33%), Positives = 62/133 (46%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
DL+ ++S QP V + AG + S ES+G G +ARIPR +G R G F
Sbjct: 55 DLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAP 111
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
RGGR P K ++ H ARGH++EK+P LP+VV
Sbjct: 112 NTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPSLPVVV 171
Query: 536 ADKVQEINKTKQA 574
++IN+ K+A
Sbjct: 172 VGDAEKINRAKEA 184
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 61.3 bits (142), Expect = 3e-08
Identities = 35/132 (26%), Positives = 60/132 (45%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
D++ +SM QP+ AG +T+AES+G+GR A +PRV+G S + AF
Sbjct: 30 DVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRGAAMVPRVKG-----SSKAAFVP 84
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
GGR P + +H + RGH + ++ ++P V+
Sbjct: 85 QAIGGRKAHPPRVNTIYHEKINKKERTLAIRSAIAATANKELVEQRGHQVSELEQIPFVI 144
Query: 536 ADKVQEINKTKQ 571
D+++ + TK+
Sbjct: 145 DDEIETVKTTKE 156
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 60.1 bits (139), Expect = 8e-08
Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVARIPRVRGGGTHRSGQGAF 349
DL+ + + + QP AG SA+S TG ARI R++GGG R G+
Sbjct: 29 DLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARIARMKGGGGRRRGEAGE 88
Query: 350 GNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPL 529
RGGR P K + H RGHII+ I ELP+
Sbjct: 89 VASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKSTVAGRGHIIDGI-ELPI 147
Query: 530 VVADKVQEINKTKQAVIFLRA 592
V++D ++ ++K + L A
Sbjct: 148 VISDDIESVSKASEVRKILSA 168
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 56.8 bits (131), Expect = 7e-07
Identities = 23/33 (69%), Positives = 31/33 (93%)
Frame = +2
Query: 491 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 589
RG++++ + E+PLVV+DK+QEINKTKQAVIFLR
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLR 37
Score = 45.6 bits (103), Expect = 0.002
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +1
Query: 616 LRCTRSXRLRAGXGKMRNRRPIQR*GGPHNLSPRNQGSXXAPFRNIPGV 762
L+ +S RLRAG GKMRNRR + R GP + ++QG + FRNIPGV
Sbjct: 46 LKVYKSQRLRAGKGKMRNRRRLHR-KGPLIIYNKDQGLTRS-FRNIPGV 92
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 54.8 bits (126), Expect = 3e-06
Identities = 37/138 (26%), Positives = 58/138 (42%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
DL+ V ++ +S QP AG +TSAES+G +AR+PRV+ SG+ A
Sbjct: 36 DLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAP 90
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
GGR+ P ++ +ARGH+ + P+VV
Sbjct: 91 NTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHVFKDSVRFPIVV 150
Query: 536 ADKVQEINKTKQAVIFLR 589
D + + T + FL+
Sbjct: 151 TDDIVNLKTTSEVEEFLK 168
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 54.0 bits (124), Expect = 5e-06
Identities = 36/139 (25%), Positives = 58/139 (41%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
D++ +++ + RQPY + +G S E+WG G AR+PR + G +
Sbjct: 29 DIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG-----RRAVVVP 83
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
GGR P KP R+W + R H+ E ELP VV
Sbjct: 84 QAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHVFE--GELPKVV 141
Query: 536 ADKVQEINKTKQAVIFLRA 592
+++++ + +TK RA
Sbjct: 142 SNELESVKRTKDVAEVFRA 160
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/72 (40%), Positives = 37/72 (51%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
DL+ +S QP AG +TSA S G GR VAR+PR++G S + A N
Sbjct: 42 DLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVN 96
Query: 356 MCRGGRMFAPTK 391
M RGGR P +
Sbjct: 97 MARGGRAAHPPR 108
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 45.6 bits (103), Expect = 0.002
Identities = 23/65 (35%), Positives = 28/65 (43%)
Frame = +2
Query: 395 WRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQA 574
WRRWH ARGH +E +PE+PLVV D I KT +A
Sbjct: 111 WRRWHRRVNIKEKRYAVCSAIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKA 170
Query: 575 VIFLR 589
V L+
Sbjct: 171 VELLK 175
Score = 39.5 bits (88), Expect = 0.12
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +1
Query: 631 SXRLRAGXGKMRNRRPIQR*GGPHNLSPRNQGSXXAPFRNIPGV 762
S +R+G GKMRNRR +QR GP + + G A FRNIPGV
Sbjct: 189 SRNVRSGKGKMRNRRYVQR-RGPLVVYSEDNGVTRA-FRNIPGV 230
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/138 (24%), Positives = 57/138 (41%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
D++ ++S + RQPY S AG + + G ++R+PR+ GG A G
Sbjct: 31 DIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTRPGLGISRMPRIAGGSRVVGIASAVG- 89
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
G+ + + + + RGH ++ +LP+VV
Sbjct: 90 ----GKSAHSPRTTKNLYVKINDRERKMAKYSAIALTASVEAVKKRGHRFKEGLKLPIVV 145
Query: 536 ADKVQEINKTKQAVIFLR 589
D V+ INKTK A+ L+
Sbjct: 146 EDGVEGINKTKDAIALLK 163
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 43.2 bits (97), Expect = 0.009
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +2
Query: 488 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 589
++GH I ++PELPLVV DKV+ KT++AV+ L+
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLK 35
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 42.7 bits (96), Expect = 0.012
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 488 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 589
ARGH IE +PELPLV+ D + + KT A+ L+
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILK 35
Score = 33.5 bits (73), Expect = 7.6
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +1
Query: 631 SXRLRAGXGKMRNRRPIQR*GGPHNLSPRNQGSXXAPFRNIPGV 762
S + G GKMRNRR I R GP + FRNIPGV
Sbjct: 49 SHAIHPGKGKMRNRRYISR-KGPLIVYGMEGAKLVKAFRNIPGV 91
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 42.3 bits (95), Expect = 0.016
Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Frame = +1
Query: 268 IMGYRTCCRPNSACPWWWYS*VRSGCLR*HVSWWTYVRPHEALAALASSRQPPTAESGLG 447
++G+R SA W VR C+R HV WW +VR E L LA QP A L
Sbjct: 117 LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALR 174
Query: 448 GSRCCYRRPSTRSG*RTHY*KDSRT--SPGCSRQSPGDQQDQTGCHLPEG 591
C R +G R + G PG ++D+ G +PEG
Sbjct: 175 CGVCARRVVCAVAGDVARPPDRQRAGGAAGGGGLDPGLREDEGGYGVPEG 224
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 41.5 bits (93), Expect = 0.029
Identities = 36/139 (25%), Positives = 57/139 (41%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 355
DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G R Q
Sbjct: 29 DLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGRARRVPQAV--- 84
Query: 356 MCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 535
GR P K + RGH ++ E+P+VV
Sbjct: 85 ---KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDR-DEVPVVV 140
Query: 536 ADKVQEINKTKQAVIFLRA 592
+D +++ KT++ V L A
Sbjct: 141 SDDFEDLVKTQEVVSLLEA 159
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 40.3 bits (90), Expect = 0.066
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 11/143 (7%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSA------ESWGT--GRAVARIPRV---RGGG 322
D++ +++ + RQPY S AG Q SA SW T GR ++R+ R R G
Sbjct: 29 DVIKRAFLAIQSHKRQPYGASPIAGKQHSAWTSKRRRSWRTSYGRGISRVSRAILRRHGA 88
Query: 323 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 502
+G + P K + W+ +ARGHI
Sbjct: 89 LFYWVARNIAQAVKGKKAHPP-KAEKDWYEKINKKERRLAIRSALAATKELDLVKARGHI 147
Query: 503 IEKIPELPLVVADKVQEINKTKQ 571
I+K +P+VV D ++++ KTK+
Sbjct: 148 IDK--PVPIVV-DGLEQLRKTKE 167
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 37.1 bits (82), Expect = 0.62
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 488 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 589
ARGH IE + ELPLV+ D + ++KT + L+
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILK 57
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.9
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 293 ARIPRVRGGGTHRSGQGAFGNMCRGG 370
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 3.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 365 HDTCYRRHPDRTYEYHHHGHAEFGRQH 285
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 5.7
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 263 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 373
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.9 bits (74), Expect = 5.7
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 377 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVRYPMIRHWFGDQP 243
TY+ H Y +HP T+ YHH H + ++ ++P + H + P
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
>UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya
CG8819-PA, isoform A; n=2; Endopterygota|Rep: PREDICTED:
similar to achintya CG8819-PA, isoform A - Apis
mellifera
Length = 447
Score = 33.5 bits (73), Expect = 7.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 353 YRRHPDRTYEYHHHGHAEFGRQHVRY 276
YRRH + YHHH H R H RY
Sbjct: 53 YRRHYRNDHHYHHHHHHYHHRHHHRY 78
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 33.5 bits (73), Expect = 7.6
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Frame = +1
Query: 283 TCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALASSRQPPTAESGLG 447
T CR +AC W W++ V +GC W + H R+P E L
Sbjct: 80 TGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSLH 139
Query: 448 GSRCCYRRPSTRS 486
G+ C P+ RS
Sbjct: 140 GAPSCLSTPAPRS 152
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,637,686
Number of Sequences: 1657284
Number of extensions: 16514875
Number of successful extensions: 44370
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 40982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43892
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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