Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D06
         (905 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.59 
AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    27   0.59 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   9.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.59
 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
 Frame = +1

Query: 370 TYVRPHEALAALASSRQPPTAESGLGGSRCCYRRPSTRSG*RTHY*KD--SRTSP-GCSR 540
           T+  PH A  A  SS    T+ SG GGS      P++ +    +Y     +  SP   S 
Sbjct: 741 THPSPHPATRASPSSPIVATSSSGGGGS----NTPNSAAAPHPYYTAAAMAAASPLSLSS 796

Query: 541 QSPGDQQDQTGCHLPEGASRHGL 609
           ++P         H P GA  H L
Sbjct: 797 KAPPHPHSALSSHSPVGAGSHHL 819


>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 0.59
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 242 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 370
           + G Q    S+G+G+    +P + G G  +SG  +FGN  +GG
Sbjct: 121 QGGGQGGIPSFGSGQQNGGVPFL-GNGQGQSGFPSFGNGQQGG 162


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 350 RRHPDRTYEYHHHGH 306
           ++HP  +  +HHH H
Sbjct: 175 QQHPGHSQHHHHHHH 189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 850,753
Number of Sequences: 2352
Number of extensions: 18125
Number of successful extensions: 63
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)