Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D05
         (891 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    26   0.46 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   4.3  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   4.3  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   5.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   5.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   5.6  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   5.6  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   7.4  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   9.8  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   9.8  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 684 CASAPRTWCCPRGGXFGLSAATGGL 758
           C S P   C P+G  FG S    G+
Sbjct: 34  CVSMPSMNCSPQGASFGSSMLNSGM 58


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 662 NNEQDYELCFRAEN 703
           NN  +Y +CFR  N
Sbjct: 396 NNRDEYNVCFRPRN 409


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = +2

Query: 74  CAFLLCLFVSVNTQSVHRRFEYKYSFKPPYLAQKDGSVPFWEY 202
           C  L  +++     S     +  Y+++ PY  QK    P W +
Sbjct: 16  CCILFFIYLYWQQTSNLTTSKLLYTYRQPYPRQKKSHPPQWTW 58


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 544 HHSAPVRMSARLQGQAVPDPGQDR-ILHEHVN 636
           HH AP+R  A    + +P P +   IL E V+
Sbjct: 61  HHKAPIRPVALPPKREIPSPKRSSPILAEKVS 92


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 610 DRILHEHVNCLL 645
           DR+L  +VNCLL
Sbjct: 38  DRLLKNYVNCLL 49


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 610 DRILHEHVNCLL 645
           DR+L  +VNCLL
Sbjct: 40  DRLLKNYVNCLL 51


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 641 YFHNGMTNNEQDYEL 685
           YFH  + NN Q Y L
Sbjct: 331 YFHMDLENNVQSYSL 345


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 610 DRILHEHVNCLL 645
           DR+L  +VNCLL
Sbjct: 38  DRLLKNYVNCLL 49


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 680 RSPARCSSFRCG 645
           R PA C  ++CG
Sbjct: 120 REPAECKCYKCG 131


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 610 DRILHEHVNCLLPQR 654
           DR+   +VNCLL ++
Sbjct: 39  DRLTENYVNCLLEKK 53


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 610 DRILHEHVNCLLPQ-RNDEQRAGLRAVLP 693
           +R+L  +VNCLL + R   +   L++ +P
Sbjct: 35  ERLLKNYVNCLLDKGRCTPEGKKLKSTIP 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,086
Number of Sequences: 336
Number of extensions: 4586
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)