Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_D05
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical p... 248 5e-66
DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like... 248 5e-66
U41274-2|AAD50512.1| 347|Caenorhabditis elegans Intracellular l... 134 6e-32
U13876-5|AAA21176.2| 449|Caenorhabditis elegans Mammalian bysti... 29 3.4
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 29 4.5
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 29 4.5
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 29 4.5
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 5.9
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 5.9
AL021176-1|CAA15975.2| 317|Caenorhabditis elegans Hypothetical ... 29 5.9
AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b prot... 29 5.9
U21324-12|AAA62559.1| 227|Caenorhabditis elegans Hypothetical p... 28 7.8
>Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical
protein K07A1.8 protein.
Length = 492
Score = 248 bits (606), Expect = 5e-66
Identities = 114/218 (52%), Positives = 155/218 (71%), Gaps = 3/218 (1%)
Frame = +2
Query: 71 VCAFLLCLFVSVNTQS--VHRRFEYKYSFKPPYLAQKDGSVPFWEYGGNAIASGESVRLA 244
V LL + V++ Q+ V ++FEYK+SF+ P LAQ+DGS+PFW G+AIASGE +RLA
Sbjct: 6 VLLVLLAVIVTIQAQNTPVFKKFEYKHSFRAPNLAQRDGSIPFWIVSGDAIASGEQLRLA 65
Query: 245 PSLRSQKGAIWTKQP-INFDWWEVDIMFKITGRGRIGADGLAFWYTTQRGDYTGEVFGSS 421
PS+RS+KG W K+ + + ++VDI KI G+GR+GADGL WYT+Q G G VFG +
Sbjct: 66 PSMRSRKGIAWNKRAFLESENFQVDIALKIGGQGRVGADGLGIWYTSQLG-ALGPVFGGN 124
Query: 422 DKWNGLGVIFDSFDNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFRDKPFPT 601
D W G+G+ DSFDND + NNP + ++NDGT+ +DH +DG+ Q+LS C RDFR+KP+P
Sbjct: 125 DFWTGMGLFLDSFDNDGQKNNPQVSLMLNDGTRSYDHHTDGSQQILSSCQRDFRNKPYPV 184
Query: 602 RAKIEYYMNTLTVYFHNGMTNNEQDYELCFRAENVVLP 715
R +IEY N LTV+ +GM + YELC RAEN+ LP
Sbjct: 185 RIRIEYLKNVLTVHIDDGMQPTPR-YELCMRAENIFLP 221
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 714 PRGGXFGLSAATGGLADXHEVIXFLTTXLY 803
PR G FG+SAATGGLAD H+V+ F L+
Sbjct: 221 PRNGYFGVSAATGGLADDHDVLDFSVFSLF 250
>DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like
protein protein.
Length = 492
Score = 248 bits (606), Expect = 5e-66
Identities = 114/218 (52%), Positives = 155/218 (71%), Gaps = 3/218 (1%)
Frame = +2
Query: 71 VCAFLLCLFVSVNTQS--VHRRFEYKYSFKPPYLAQKDGSVPFWEYGGNAIASGESVRLA 244
V LL + V++ Q+ V ++FEYK+SF+ P LAQ+DGS+PFW G+AIASGE +RLA
Sbjct: 6 VLLVLLAVIVTIQAQNTPVFKKFEYKHSFRAPNLAQRDGSIPFWIVSGDAIASGEQLRLA 65
Query: 245 PSLRSQKGAIWTKQP-INFDWWEVDIMFKITGRGRIGADGLAFWYTTQRGDYTGEVFGSS 421
PS+RS+KG W K+ + + ++VDI KI G+GR+GADGL WYT+Q G G VFG +
Sbjct: 66 PSMRSRKGIAWNKRAFLESENFQVDIALKIGGQGRVGADGLGIWYTSQLG-ALGPVFGGN 124
Query: 422 DKWNGLGVIFDSFDNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFRDKPFPT 601
D W G+G+ DSFDND + NNP + ++NDGT+ +DH +DG+ Q+LS C RDFR+KP+P
Sbjct: 125 DFWTGMGLFLDSFDNDGQKNNPQVSLMLNDGTRSYDHHTDGSQQILSSCQRDFRNKPYPV 184
Query: 602 RAKIEYYMNTLTVYFHNGMTNNEQDYELCFRAENVVLP 715
R +IEY N LTV+ +GM + YELC RAEN+ LP
Sbjct: 185 RIRIEYLKNVLTVHIDDGMQPTPR-YELCMRAENIFLP 221
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 714 PRGGXFGLSAATGGLADXHEVIXFLTTXLY 803
PR G FG+SAATGGLAD H+V+ F L+
Sbjct: 221 PRNGYFGVSAATGGLADDHDVLDFSVFSLF 250
>U41274-2|AAD50512.1| 347|Caenorhabditis elegans Intracellular
lectin protein 2 protein.
Length = 347
Score = 134 bits (325), Expect = 6e-32
Identities = 79/218 (36%), Positives = 117/218 (53%), Gaps = 11/218 (5%)
Frame = +2
Query: 101 SVNTQSVHR-RFEYK--YSFKPPYLAQKDGSVPFWEYGGNAIASGESVRLAPSLRSQKGA 271
++N Q+VH R YK +S PY +P W G+ S +RL +S+ GA
Sbjct: 32 NINGQTVHEFRGYYKREHSLIKPYTGS-GADIPNWNIIGSTFVSSNQIRLTADEQSKAGA 90
Query: 272 IWTKQPINFDWWEVDIMFKITG-RGRIGADGLAFWYTTQRGDYTGEVFGSSDKWNGLGVI 448
+W QP+ WE+ + FK+TG G + DG+A WYT++ + G VFG D + GL V
Sbjct: 91 LWNTQPVWSRDWELQVSFKVTGSTGDLFGDGMAIWYTSE-PNILGPVFGGKDYFRGLAVF 149
Query: 449 FDSFDNDN---KHNNPYIMAVVNDGTKVFDHKSDGT-TQL---LSGCLRDFRDKPFPTRA 607
D++ N N +H +P+I A+V+DG+ +DH DGT TQL +GC FR+K T+
Sbjct: 150 LDTYSNHNGPHQHGHPFISAMVSDGSLHYDHDKDGTHTQLGGENTGCTAKFRNKDHDTQV 209
Query: 608 KIEYYMNTLTVYFHNGMTNNEQDYELCFRAENVVLPPG 721
I Y +TL+++ N+ + LC NV LP G
Sbjct: 210 LIRYVGDTLSIF---SDIENKGIWNLCMSVNNVQLPTG 244
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 714 PRGGXFGLSAATGGLADXHEVI 779
P G G+SAATG L+D H+V+
Sbjct: 242 PTGYYIGVSAATGDLSDAHDVV 263
>U13876-5|AAA21176.2| 449|Caenorhabditis elegans Mammalian bystin
(adhesion protein)related protein 1 protein.
Length = 449
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 592 VPDPGQDRILHEHVNCLLPQRNDEQRA-GLRAVLPRRERGAAPGADXS 732
VPD +IL+E LL + + Q + +P+R+RGA GAD S
Sbjct: 52 VPDSLSSKILNEARKQLLEEALERQETESATSSVPKRQRGAWLGADAS 99
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 461 DNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFR 583
D D++ + Y+ AVVN+ F SDG +L G L D +
Sbjct: 180 DVDDEILDQYVQAVVNNENPDFSELSDGQLNILIGRLVDLK 220
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 461 DNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFR 583
D D++ + Y+ AVVN+ F SDG +L G L D +
Sbjct: 180 DVDDEILDQYVQAVVNNENPDFSELSDGQLNILIGRLVDLK 220
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 461 DNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFR 583
D D++ + Y+ AVVN+ F SDG +L G L D +
Sbjct: 180 DVDDEILDQYVQAVVNNENPDFSELSDGQLNILIGRLVDLK 220
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 707 PRSRRGSTARSPARCSSFRCGSRQLTCSCSI-LSWPGSGTACP 582
P R G+ + RC++ C + C C++ + P +CP
Sbjct: 1417 PEGRFGAGCKEKCRCANGHCNASSGECKCNLGFTGPSCEQSCP 1459
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 707 PRSRRGSTARSPARCSSFRCGSRQLTCSCSI-LSWPGSGTACP 582
P R G+ + RC++ C + C C++ + P +CP
Sbjct: 1417 PEGRFGAGCKEKCRCANGHCNASSGECKCNLGFTGPSCEQSCP 1459
>AL021176-1|CAA15975.2| 317|Caenorhabditis elegans Hypothetical
protein Y43E12A.1 protein.
Length = 317
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 215 LRFHHTPKTAPIHLFALNKVV*MNI 141
LRFH TP+T + +F L++++ NI
Sbjct: 75 LRFHLTPETLHLTIFVLDRIIVKNI 99
>AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b protein
2.2 protein.
Length = 339
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 215 LRFHHTPKTAPIHLFALNKVV*MNI 141
LRFH TP+T + +F L++++ NI
Sbjct: 97 LRFHLTPETLHLTIFVLDRIIVKNI 121
>U21324-12|AAA62559.1| 227|Caenorhabditis elegans Hypothetical
protein C35D10.3 protein.
Length = 227
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 419 SDKWNGLGVIFDSFDNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFRDK 589
+DK N FD F+N +++NN I +N+ + S G+T +++ +R RD+
Sbjct: 105 NDKKNSDKKEFDFFNNRDQNNN--IAGALNEVASKTSNGSMGSTDVVAAQIRKARDE 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,358,577
Number of Sequences: 27780
Number of extensions: 441229
Number of successful extensions: 1200
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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