Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D03
         (849 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.76 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.76 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   4.0  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   4.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   4.0  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   5.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   7.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   7.0  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 404 NDLQQELKYHGRVHILLCDCC 342
           +DLQQ+L+Y   V   L  CC
Sbjct: 82  SDLQQKLRYFEEVFSSLLSCC 102


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 404 NDLQQELKYHGRVHILLCDCC 342
           +DLQQ+L+Y   V   L  CC
Sbjct: 82  SDLQQKLRYFEEVFSSLLSCC 102


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -1

Query: 681 HTXVHQGTARFVCT*CLHGASQSDQL 604
           H   H G  RF C  C     +SD L
Sbjct: 365 HLRTHTGEKRFACPICNKRFMRSDHL 390


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +2

Query: 227 CCGRIQSEC--DPCSPAGAITCYQ 292
           C G I +EC  +PCS AG + C Q
Sbjct: 295 CEGDI-NECLSNPCSNAGTLDCVQ 317


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 435 SEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTF 542
           +   IKN + LI E  +  +DF   +  D  + + F
Sbjct: 96  TSSKIKNMYSLISECAENFVDFFQGREQDVEIKEVF 131


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 681 HTXVHQGTARFVCT*CLHGASQSDQL 604
           H  +H G   + C  CL   SQS  L
Sbjct: 96  HLRIHSGEKPYECKLCLLRFSQSGNL 121


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 681 HTXVHQGTARFVCT*CLHGASQSDQL 604
           H  +H G   + C  CL   SQS  L
Sbjct: 352 HLRIHSGEKPYECKLCLLRFSQSGNL 377


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 261 ARQQVRSPVTNIARTSFFHIKRANIW 338
           A Q +   V N     FF +KR+ ++
Sbjct: 329 AAQVIEKSVANFTAAGFFDVKRSTLF 354


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 242  ECVHSITTNIISVDSRDQHLAFMVINEQA 156
            E +H I TN   +  + +  +  ++NE+A
Sbjct: 941  ELIHKIATNDHEIIDKIEMFSLQILNERA 969



 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 242 ECVHSITTNIISVDSRDQHLAFMVINEQA 156
           E +H I TN   +  + +  +  ++NE+A
Sbjct: 665 ELIHKIETNDHEIIDKIEMFSLQILNERA 693



 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 242  ECVHSITTNIISVDSRDQHLAFMVINEQA 156
            E +H I TN   +  + +  +  ++NE+A
Sbjct: 1043 ELIHKIETNEHEIIDKIEMFSLQILNERA 1071


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +3

Query: 243 RVNVIHARQQVRSPVTNIARTSFFHIKRANIW--LAAVT 353
           R  ++   QQV + +  I   +FF I R+     LA +T
Sbjct: 306 RRELLRLAQQVNANIAQITAANFFDISRSTFLGILATIT 344


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 488 DLGLWLPSEF*YWGPEDI 541
           D+ ++LP  F ++ PEDI
Sbjct: 489 DVKIFLPFRFLFYKPEDI 506


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 242 ECVHSITTNIISVDSRDQHLAFMVINEQA 156
           E +H I TN   +  + +  +  ++NE+A
Sbjct: 324 ELIHKIETNEHEIIDKIEMFSLQILNERA 352


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,234
Number of Sequences: 336
Number of extensions: 4444
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)