Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C24
(985 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 9e-07
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 41 2e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 38 2e-04
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 38 2e-04
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 38 2e-04
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 38 2e-04
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 38 2e-04
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 36 4e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 36 6e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 35 0.001
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 35 0.001
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 34 0.002
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 30 0.028
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 30 0.037
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 1.0
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 9e-07
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +3
Query: 78 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 242
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 243 MNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVL 347
+ W L+W + E+ V W PD V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 40.7 bits (91), Expect = 2e-05
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Frame = +3
Query: 60 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 218
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 219 VRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVL 347
+ L+ W D + W+ E+G T V W PD VL
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVL 109
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 37.5 bits (83), Expect = 2e-04
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 195 NIRESESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
++ E + A L++ W+D L WN E+G + N W PD ++ S
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 37.5 bits (83), Expect = 2e-04
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 195 NIRESESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
++ E + A L++ W+D L WN E+G + N W PD ++ S
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 37.5 bits (83), Expect = 2e-04
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 195 NIRESESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
++ E + A L++ W+D L WN E+G + N W PD ++ S
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 37.5 bits (83), Expect = 2e-04
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 195 NIRESESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
++ E + A L++ W+D L WN E+G + N W PD ++ S
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 37.5 bits (83), Expect = 2e-04
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 195 NIRESESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
++ E + A L++ W+D L WN E+G + N W PD ++ S
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 37.5 bits (83), Expect = 2e-04
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 195 NIRESESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
++ E + A L++ W+D L WN E+G + N W PD ++ S
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 37.5 bits (83), Expect = 2e-04
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 195 NIRESESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
++ E + A L++ W+D L WN E+G + N W PD ++ S
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 146
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 37.5 bits (83), Expect = 2e-04
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 195 NIRESESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
++ E + A L++ W+D L WN E+G + N W PD ++ S
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 146
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 37.5 bits (83), Expect = 2e-04
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Frame = +3
Query: 48 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 206
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 207 SESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVL 347
T + ++ W D +L WN ++G V W PD VL
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVL 109
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 36.3 bits (80), Expect = 4e-04
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Frame = +3
Query: 78 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 236
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 237 LQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVL 347
++ +W D +L W+ E+G + V + W PD VL
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVL 113
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 35.9 bits (79), Expect = 6e-04
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Frame = +3
Query: 105 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDXR 263
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 264 LSWNAXEWGXSTLAGVLGNAXWTPDXVL 347
L WN E+G + V W PD VL
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVL 122
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 34.7 bits (76), Expect = 0.001
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +3
Query: 105 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDXRLS 269
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 270 WNAXEWGXSTLAGVLGNAXWTPDXVLLXSXATXXRGLXRSXARXYIXGL 416
W E+G + V + W PD VL + + A Y GL
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYSGL 140
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 34.7 bits (76), Expect = 0.001
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 159 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPD 338
+V L+LH ++ E + + W D L WNA E+ + V N W PD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 339 XVL 347
+L
Sbjct: 92 TIL 94
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 33.9 bits (74), Expect = 0.002
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +3
Query: 105 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDXRLS 269
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 270 WNAXEWGXSTLAGVLGNAXWTPDXVLLXSXATXXRGLXRSXARXYIXGL 416
W E+G + V + W PD VL + + A Y GL
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 33.5 bits (73), Expect = 0.003
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 156 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWT 332
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + + + W
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 333 PDXVL 347
PD VL
Sbjct: 111 PDIVL 115
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 30.3 bits (65), Expect = 0.028
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +3
Query: 81 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 248
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 249 WIDXRLSWNAXEWGXSTLAGVLGNAXWTPD 338
W D LSW ++ V + W PD
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPD 128
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 29.9 bits (64), Expect = 0.037
Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +3
Query: 57 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 221
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 222 RIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
L++ W D + WN ++G + + W PD ++ S
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNS 115
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 1.0
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 24 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 128
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,314
Number of Sequences: 438
Number of extensions: 1692
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32532591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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