Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_C23
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024214-10|AAF36080.1|  778|Caenorhabditis elegans Calpain fami...    43   3e-04
L25598-4|AAV58888.1|  737|Caenorhabditis elegans Calpain family ...    41   0.001
L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family ...    41   0.001
L25598-2|AAV58887.1|  780|Caenorhabditis elegans Calpain family ...    41   0.001
AC024763-6|AAO12403.1|  603|Caenorhabditis elegans Calpain famil...    40   0.003
AC024763-5|AAO12402.1|  716|Caenorhabditis elegans Calpain famil...    40   0.003
AC024214-9|AAF36079.1|  790|Caenorhabditis elegans Calpain famil...    36   0.040
AL132848-5|CAB60389.2|  702|Caenorhabditis elegans Hypothetical ...    34   0.12 

>AC024214-10|AAF36080.1|  778|Caenorhabditis elegans Calpain family
           protein 7 protein.
          Length = 778

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 682 AIVGCW--AAVANLXLXRXXFFKIIPHDXXXDEDXXGVXHFXXXXSGXWV 825
           A+  CW  AAVANL L    F++++P D    E+  G+ HF     G WV
Sbjct: 361 ALGDCWLLAAVANLTLRDELFYRVVPPDQSFTENYAGIFHFQFWRYGQWV 410


>L25598-4|AAV58888.1|  737|Caenorhabditis elegans Calpain family
           protein 1, isoform b protein.
          Length = 737

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +1

Query: 694 CW--AAVANLXLXRXXFFKIIPHDXXXDEDXXGVXHFXXXXSGXWV 825
           CW  AA ANL L    F++++P D    E+  G+ HF     G WV
Sbjct: 325 CWLLAAAANLTLKDELFYRVVPPDQSFTENYAGIFHFQFWQYGKWV 370


>L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family
           protein 1, isoform d protein.
          Length = 759

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +1

Query: 694 CW--AAVANLXLXRXXFFKIIPHDXXXDEDXXGVXHFXXXXSGXWV 825
           CW  AA ANL L    F++++P D    E+  G+ HF     G WV
Sbjct: 350 CWLLAAAANLTLKDELFYRVVPPDQSFTENYAGIFHFQFWQYGKWV 395


>L25598-2|AAV58887.1|  780|Caenorhabditis elegans Calpain family
           protein 1, isoform a protein.
          Length = 780

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +1

Query: 694 CW--AAVANLXLXRXXFFKIIPHDXXXDEDXXGVXHFXXXXSGXWV 825
           CW  AA ANL L    F++++P D    E+  G+ HF     G WV
Sbjct: 371 CWLLAAAANLTLKDELFYRVVPPDQSFTENYAGIFHFQFWQYGKWV 416


>AC024763-6|AAO12403.1|  603|Caenorhabditis elegans Calpain family
           protein 4, isoform b protein.
          Length = 603

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 682 AIVGCW--AAVANLXLXRXXFFKIIPHDXXXDEDXXGVXHFXXXXSGXWV 825
           A+  CW  AA+AN+ L    F++I+P +    E+  G+ HF     G WV
Sbjct: 291 ALGDCWFLAALANITLYDALFYRIVPPNQSFTENYAGIFHFQFWHYGKWV 340


>AC024763-5|AAO12402.1|  716|Caenorhabditis elegans Calpain family
           protein 4, isoform a protein.
          Length = 716

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 682 AIVGCW--AAVANLXLXRXXFFKIIPHDXXXDEDXXGVXHFXXXXSGXWV 825
           A+  CW  AA+AN+ L    F++I+P +    E+  G+ HF     G WV
Sbjct: 291 ALGDCWFLAALANITLYDALFYRIVPPNQSFTENYAGIFHFQFWHYGKWV 340


>AC024214-9|AAF36079.1|  790|Caenorhabditis elegans Calpain family
           protein 6 protein.
          Length = 790

 Score = 35.9 bits (79), Expect = 0.040
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 694 CW--AAVANLXLXRXXFFKIIPHDXXXDEDXXGVXHFXXXXSGXWV 825
           CW  AA A L      F++++P D    E+  G+ HF     G WV
Sbjct: 212 CWFLAAAATLAQRDELFYRVVPPDQSFTENYAGIFHFQFWRYGEWV 257


>AL132848-5|CAB60389.2|  702|Caenorhabditis elegans Hypothetical
           protein Y47H10A.1 protein.
          Length = 702

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 700 AAVANLXLXRXXFFKIIPHDXXXDEDXXGVXHFXXXXSGXWV 825
           +  ANL L    F++++P D    E   G+ HF     G WV
Sbjct: 274 SGAANLSLRDELFYRVVPPDQSFTEKYAGIFHFQFWRYGEWV 315


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,535,544
Number of Sequences: 27780
Number of extensions: 82620
Number of successful extensions: 57
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)