Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C19
(836 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical p... 268 2e-72
DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like... 268 2e-72
U41274-2|AAD50512.1| 347|Caenorhabditis elegans Intracellular l... 144 9e-35
U13876-5|AAA21176.2| 449|Caenorhabditis elegans Mammalian bysti... 31 1.3
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 29 4.1
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 29 4.1
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 29 4.1
AL021176-1|CAA15975.2| 317|Caenorhabditis elegans Hypothetical ... 29 5.4
AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b prot... 29 5.4
Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z49207-7|CAA89072.1| 512|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical
protein K07A1.8 protein.
Length = 492
Score = 268 bits (658), Expect = 2e-72
Identities = 127/250 (50%), Positives = 169/250 (67%), Gaps = 3/250 (1%)
Frame = +3
Query: 72 VCAFLLCLFVSVNTQ--PVHRRFEYKYSFKPPYLAQKDGSVPFWEYGGNAIASGESVRLA 245
V LL + V++ Q PV ++FEYK+SF+ P LAQ+DGS+PFW G+AIASGE +RLA
Sbjct: 6 VLLVLLAVIVTIQAQNTPVFKKFEYKHSFRAPNLAQRDGSIPFWIVSGDAIASGEQLRLA 65
Query: 246 PSLRSQKGAIWTKQP-INFDWWEVDIMFKITGRGRIGADGLAFWYTTQRGDYTGEVFGSS 422
PS+RS+KG W K+ + + ++VDI KI G+GR+GADGL WYT+Q G G VFG +
Sbjct: 66 PSMRSRKGIAWNKRAFLESENFQVDIALKIGGQGRVGADGLGIWYTSQLG-ALGPVFGGN 124
Query: 423 DKWNGLGVIFDSFDNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFRNKPFPT 602
D W G+G+ DSFDND + NNP + ++NDGT+ +DH +DG+ Q+LS C RDFRNKP+P
Sbjct: 125 DFWTGMGLFLDSFDNDGQKNNPQVSLMLNDGTRSYDHHTDGSQQILSSCQRDFRNKPYPV 184
Query: 603 RAKIEYYMNTLTVYFHNGMTNNEQDYELCFRAENVVLPRGRTLRSVRRHGGLADXHEVIX 782
R +IEY N LTV+ +GM + YELC RAEN+ LPR GGLAD H+V+
Sbjct: 185 RIRIEYLKNVLTVHIDDGMQPTPR-YELCMRAENIFLPRNGYFGVSAATGGLADDHDVLD 243
Query: 783 FLTTGLXSTQ 812
F L + Q
Sbjct: 244 FSVFSLFNEQ 253
>DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like
protein protein.
Length = 492
Score = 268 bits (658), Expect = 2e-72
Identities = 127/250 (50%), Positives = 169/250 (67%), Gaps = 3/250 (1%)
Frame = +3
Query: 72 VCAFLLCLFVSVNTQ--PVHRRFEYKYSFKPPYLAQKDGSVPFWEYGGNAIASGESVRLA 245
V LL + V++ Q PV ++FEYK+SF+ P LAQ+DGS+PFW G+AIASGE +RLA
Sbjct: 6 VLLVLLAVIVTIQAQNTPVFKKFEYKHSFRAPNLAQRDGSIPFWIVSGDAIASGEQLRLA 65
Query: 246 PSLRSQKGAIWTKQP-INFDWWEVDIMFKITGRGRIGADGLAFWYTTQRGDYTGEVFGSS 422
PS+RS+KG W K+ + + ++VDI KI G+GR+GADGL WYT+Q G G VFG +
Sbjct: 66 PSMRSRKGIAWNKRAFLESENFQVDIALKIGGQGRVGADGLGIWYTSQLG-ALGPVFGGN 124
Query: 423 DKWNGLGVIFDSFDNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFRNKPFPT 602
D W G+G+ DSFDND + NNP + ++NDGT+ +DH +DG+ Q+LS C RDFRNKP+P
Sbjct: 125 DFWTGMGLFLDSFDNDGQKNNPQVSLMLNDGTRSYDHHTDGSQQILSSCQRDFRNKPYPV 184
Query: 603 RAKIEYYMNTLTVYFHNGMTNNEQDYELCFRAENVVLPRGRTLRSVRRHGGLADXHEVIX 782
R +IEY N LTV+ +GM + YELC RAEN+ LPR GGLAD H+V+
Sbjct: 185 RIRIEYLKNVLTVHIDDGMQPTPR-YELCMRAENIFLPRNGYFGVSAATGGLADDHDVLD 243
Query: 783 FLTTGLXSTQ 812
F L + Q
Sbjct: 244 FSVFSLFNEQ 253
>U41274-2|AAD50512.1| 347|Caenorhabditis elegans Intracellular
lectin protein 2 protein.
Length = 347
Score = 144 bits (348), Expect = 9e-35
Identities = 85/237 (35%), Positives = 125/237 (52%), Gaps = 11/237 (4%)
Frame = +3
Query: 102 SVNTQPVHR-RFEYK--YSFKPPYLAQKDGSVPFWEYGGNAIASGESVRLAPSLRSQKGA 272
++N Q VH R YK +S PY +P W G+ S +RL +S+ GA
Sbjct: 32 NINGQTVHEFRGYYKREHSLIKPYTGS-GADIPNWNIIGSTFVSSNQIRLTADEQSKAGA 90
Query: 273 IWTKQPINFDWWEVDIMFKITG-RGRIGADGLAFWYTTQRGDYTGEVFGSSDKWNGLGVI 449
+W QP+ WE+ + FK+TG G + DG+A WYT++ + G VFG D + GL V
Sbjct: 91 LWNTQPVWSRDWELQVSFKVTGSTGDLFGDGMAIWYTSE-PNILGPVFGGKDYFRGLAVF 149
Query: 450 FDSFDNDN---KHNNPYIMAVVNDGTKVFDHKSDGT-TQL---LSGCLRDFRNKPFPTRA 608
D++ N N +H +P+I A+V+DG+ +DH DGT TQL +GC FRNK T+
Sbjct: 150 LDTYSNHNGPHQHGHPFISAMVSDGSLHYDHDKDGTHTQLGGENTGCTAKFRNKDHDTQV 209
Query: 609 KIEYYMNTLTVYFHNGMTNNEQDYELCFRAENVVLPRGRTLRSVRRHGGLADXHEVI 779
I Y +TL+++ N+ + LC NV LP G + G L+D H+V+
Sbjct: 210 LIRYVGDTLSIF---SDIENKGIWNLCMSVNNVQLPTGYYIGVSAATGDLSDAHDVV 263
>U13876-5|AAA21176.2| 449|Caenorhabditis elegans Mammalian bystin
(adhesion protein)related protein 1 protein.
Length = 449
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 584 EQAVPDPGQDRILHEHVNCLLPQRNDEQRA-GLRAVLPRRERGAAPGADTS 733
++ VPD +IL+E LL + + Q + +P+R+RGA GAD S
Sbjct: 49 DEFVPDSLSSKILNEARKQLLEEALERQETESATSSVPKRQRGAWLGADAS 99
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 462 DNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFR 584
D D++ + Y+ AVVN+ F SDG +L G L D +
Sbjct: 180 DVDDEILDQYVQAVVNNENPDFSELSDGQLNILIGRLVDLK 220
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 462 DNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFR 584
D D++ + Y+ AVVN+ F SDG +L G L D +
Sbjct: 180 DVDDEILDQYVQAVVNNENPDFSELSDGQLNILIGRLVDLK 220
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 462 DNDNKHNNPYIMAVVNDGTKVFDHKSDGTTQLLSGCLRDFR 584
D D++ + Y+ AVVN+ F SDG +L G L D +
Sbjct: 180 DVDDEILDQYVQAVVNNENPDFSELSDGQLNILIGRLVDLK 220
>AL021176-1|CAA15975.2| 317|Caenorhabditis elegans Hypothetical
protein Y43E12A.1 protein.
Length = 317
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 216 LRFHHTPKTAPIHLFALNKVV*MNI 142
LRFH TP+T + +F L++++ NI
Sbjct: 75 LRFHLTPETLHLTIFVLDRIIVKNI 99
>AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b protein
2.2 protein.
Length = 339
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 216 LRFHHTPKTAPIHLFALNKVV*MNI 142
LRFH TP+T + +F L++++ NI
Sbjct: 97 LRFHLTPETLHLTIFVLDRIIVKNI 121
>Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical
protein F53H10.2 protein.
Length = 900
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 368 CQAVSTYSASAGNLEHDIDLPPVKVNGLFGPYSPLLASKRRRE 240
CQ V + ++S E D P NG+ G L+ K+R E
Sbjct: 329 CQIVKSANSSLPVAEQSPDAPSCSTNGVDGDMKHLMNGKKRSE 371
>Z49207-7|CAA89072.1| 512|Caenorhabditis elegans Hypothetical
protein R07E3.5a protein.
Length = 512
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 615 EYYMNTLTVYFHNGMTNNEQDYE 683
EYY+NTL F G T NEQ YE
Sbjct: 27 EYYVNTLVYIFEWGATLNEQ-YE 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,480,946
Number of Sequences: 27780
Number of extensions: 456679
Number of successful extensions: 1358
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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