Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_C19
         (836 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.5  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   2.6  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    23   4.6  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    23   4.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   8.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   8.1  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   8.1  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 276 WTKQPINFDWWEVDI 320
           W K+PI  D +EVDI
Sbjct: 606 WVKKPIEQDMFEVDI 620


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 165 LAQKDGSVPFWEYGGNA 215
           L Q + SVP W  GGNA
Sbjct: 571 LKQANQSVPDWMMGGNA 587


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 611 DRILHEHVNCLLPQ 652
           +R+L+ +VNCLL Q
Sbjct: 40  ERLLNAYVNCLLDQ 53


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 611 DRILHEHVNCLLPQ 652
           +R+L+ +VNCLL Q
Sbjct: 40  ERLLNAYVNCLLDQ 53


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 12/37 (32%), Positives = 14/37 (37%)
 Frame = +1

Query: 700  RTWCCPGGGHFGLSAATGGWPTXTKXSXSSPPVXXPR 810
            +T+  PG GH G      G PT       S     PR
Sbjct: 1746 QTFPHPGNGHSGTMGPPVGHPTNASAHSRSGSQSMPR 1782


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 438 LGVIFDSFDNDNKHNNPYIMAVVNDGTKVFDHKSDGTT 551
           LG  +D   N +++ NP I+       K    +  GTT
Sbjct: 55  LGASYDIESNSHQYKNPIIVMYYAGAVKAGLVQPQGTT 92


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 313 SISCSRLPAEAE*VLTAWHSGIPHSEATTPAKCSARRT 426
           S++C R   EAE   T+  SGI  S   +     AR T
Sbjct: 265 SVTCDRPSDEAEPSSTSKKSGIVRSHQQSCINRVARET 302


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 615 EYYMNTLTVYFHNGMTNNEQDYELC 689
           E+Y + L  YF  G   ++   +LC
Sbjct: 6   EHYRHILLFYFRKGKNASQAHKKLC 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,662
Number of Sequences: 438
Number of extensions: 5656
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)