Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C18
(916 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 46 2e-06
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 46 2e-06
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 46 2e-06
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 44 9e-06
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 43 1e-05
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 43 1e-05
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 42 2e-05
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 42 2e-05
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 42 2e-05
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 42 3e-05
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 39 2e-04
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 38 3e-04
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 46.0 bits (104), Expect = 2e-06
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Frame = +3
Query: 129 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 293
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLL-XAGAXTAGDYALRARVSNNGSVSWI 446
WN E+G L ++ +LW+PDV++ A G Y V NNGS ++
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYV 139
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 45.6 bits (103), Expect = 2e-06
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Frame = +3
Query: 141 LLATYD---RESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 311
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN +
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 312 G-CSTWLVSSERLWRPDVVLL-XAGAXTAGDYA-LRARVSNNGSVSWI 446
G + +WRPDVVL AG Y V + G V W+
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYNNAGGSDQHHYGDTNVLVYSEGKVLWV 153
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 45.6 bits (103), Expect = 2e-06
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Frame = +3
Query: 129 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 293
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 31 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 90
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLL-XAGAXTAGDYALRARVSNNGSVSW 443
W E+G L V S+ +WRPD+VL A +A V NNG V W
Sbjct: 91 WEPKEYGGVQMLHVPSDHIWRPDIVLYNNADGHYEVTLMTKATVYNNGMVIW 142
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 43.6 bits (98), Expect = 9e-06
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Frame = +3
Query: 87 ASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTV 245
A + C + D LL+ Y++ P + LT+ ++ N++ T
Sbjct: 13 AVVSVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTT 72
Query: 246 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-XAGAXTAGDYALRARV 419
+ ++ W D +L W E+G L V S+ +WRPD+VL A A +A +
Sbjct: 73 NLW--VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATL 130
Query: 420 SNNGSVSW 443
+ G V W
Sbjct: 131 NYTGRVEW 138
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 43.2 bits (97), Expect = 1e-05
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Frame = +3
Query: 129 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 293
++++LLATY+ P + V L L+ ++ E + L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLL-XAGAXTAGDYALRARVSNNGSVSWI 446
WN E+G L ++ +LW+PDV++ A G Y V NNGS ++
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYV 139
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 43.2 bits (97), Expect = 1e-05
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Frame = +3
Query: 129 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 293
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 31 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 90
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLL-XAGAXTAGDYALRARVSNNGSVSW 443
W E+G L V S+ +WRPD+VL A A +A + + G V W
Sbjct: 91 WEPKEYGGVQMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEW 142
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 42.3 bits (95), Expect = 2e-05
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 261 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-XAGAXTAGDYALRARVSNNGS 434
L++ W D + WN+ E+G L + RLW+PDV++ A G Y V NNGS
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNGS 118
Query: 435 VSWI 446
++
Sbjct: 119 CLYV 122
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 42.3 bits (95), Expect = 2e-05
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 261 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-XAGAXTAGDYALRARVSNNGS 434
L++ W D L WN E+G L + R+W+PDV++ A G Y V NNGS
Sbjct: 91 LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLMYNSADEGFDGTYPTNVVVRNNGS 150
Query: 435 VSWI 446
++
Sbjct: 151 CLYV 154
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 42.3 bits (95), Expect = 2e-05
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +3
Query: 129 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 287
+ D LL+ Y+R P S ++V L L L N+++ T I L+ W D +
Sbjct: 39 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHK 96
Query: 288 LSWNAGEWGCSTWL-VSSERLWRPDVVL 368
W+ E+G T L V SE +W PD+VL
Sbjct: 97 FKWDPAEYGGVTELYVPSEHIWLPDIVL 124
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 41.9 bits (94), Expect = 3e-05
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Frame = +3
Query: 129 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 287
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 27 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84
Query: 288 LSWNAGEWG-CSTWLVSSERLWRPDVVLL-XAGAXTAGDYALRARVSNNGSVSW 443
L WN ++G T V SE +W PD+VL A +A + + G V W
Sbjct: 85 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVW 138
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 38.7 bits (86), Expect = 2e-04
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-XAGAXTA 392
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL A
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYE 124
Query: 393 GDYALRARVSNNGSVSWI 446
Y + NG V W+
Sbjct: 125 VRYKSNVLIYPNGEVLWV 142
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 38.3 bits (85), Expect = 3e-04
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = +3
Query: 129 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 293
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLR 92
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVL 368
W+ E+G L V SE++W PD+VL
Sbjct: 93 WDPEEYGGVEMLYVPSEQIWLPDIVL 118
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,118
Number of Sequences: 2352
Number of extensions: 10624
Number of successful extensions: 40
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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