Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C17
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598 34 0.13
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 31 0.93
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 31 0.93
10_08_0029 + 14270945-14271364,14271449-14272486 31 0.93
03_05_0847 + 28186873-28188147 31 0.93
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 30 2.1
02_05_0943 + 32976990-32976996,32977119-32977464,32977586-329777... 29 4.9
01_06_1788 - 39873900-39873986,39874009-39874137,39874180-398742... 29 4.9
01_01_1137 + 9017211-9018584 29 4.9
10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-36... 29 6.5
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 29 6.5
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 28 8.6
05_04_0389 - 20845490-20845600,20845697-20846006,20846097-208462... 28 8.6
02_04_0142 + 20167876-20169108 28 8.6
02_02_0278 + 8500983-8501253,8501343-8501558,8501704-8501855,850... 28 8.6
02_02_0156 - 7277793-7277875,7278535-7278638,7278808-7279211,727... 28 8.6
>03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598
Length = 537
Score = 34.3 bits (75), Expect = 0.13
Identities = 30/91 (32%), Positives = 41/91 (45%)
Frame = +3
Query: 174 PLPHPSNRNTPLLHGRNRQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFN 353
PLP P R TP H G R + TT PS T P+ +SP+C S +++ + +
Sbjct: 373 PLPAPCRRQTPHHHQVAALGARLRVEETTTTLPS--TPSPS-SSPQC--FSTQTRPLVAS 427
Query: 354 DTSQSPTRRRALAQVQPERGGSNIGSPCWRR 446
S TRR P S++ SP W R
Sbjct: 428 SNYGSSTRR--TRSTPPTSSASSMTSPRWCR 456
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 31.5 bits (68), Expect = 0.93
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Frame = +3
Query: 177 LPHPSNRNTPLLHGRNRQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFND 356
+P PS+ PLL G G +V G +T+ P +PR G+A L +
Sbjct: 369 VPLPSSNGAPLLPSYPPLGYGIMSVPGAYGAAPASTAQPMLYAPRAPPGAAMVPMMLPDG 428
Query: 357 ----TSQSPTRRRALAQVQPERGGSNIGS 431
Q P + LA P++ G GS
Sbjct: 429 RLVYVVQQPGGQLPLASPPPQQAGHRSGS 457
>11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 31.5 bits (68), Expect = 0.93
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Frame = +3
Query: 177 LPHPSNRNTPLLHGRNRQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFND 356
+P PS+ PLL G G +V G +T+ P +PR G+A L +
Sbjct: 777 VPLPSSNGAPLLPSYPPLGYGIMSVPGAYGAAPASTAQPMLYAPRAPPGAAMVPMMLPDG 836
Query: 357 ----TSQSPTRRRALAQVQPERGGSNIGS 431
Q P + LA P++ G GS
Sbjct: 837 RLVYVVQQPGGQLPLASPPPQQAGHRSGS 865
>10_08_0029 + 14270945-14271364,14271449-14272486
Length = 485
Score = 31.5 bits (68), Expect = 0.93
Identities = 33/131 (25%), Positives = 49/131 (37%), Gaps = 4/131 (3%)
Frame = -2
Query: 622 WLVRFVAVRSLHGGKMSCESAQVAGGETS---AVAAHPVRENRADRLDGTEAGRRVRQTT 452
WL F+A + GG+ S E Q GG+ + VAA RE + + A
Sbjct: 7 WLRSFLAGKKDGGGRRSGERQQHGGGDATPAVEVAAASTREKKRWSFRRSSASASAAAMG 66
Query: 451 RPRLQHGLPILEPPRSGCTCARAR-RLVGDCEVSLNNSDCDRALPASQRGDVLVGKDVAP 275
+P EP SG R R V D E ++ A+ + GD + V
Sbjct: 67 KPAAVTAPSTPEPSVSGLASVSERARDVADLEGQSKHAMAVAAVATAAEGDDVSASAVEV 126
Query: 274 DGCSVVPSTAR 242
++ +T R
Sbjct: 127 VAAVMIQATYR 137
>03_05_0847 + 28186873-28188147
Length = 424
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 174 PLPHPSNRNTPLLHGRNRQGDGTRAVDGTTEHPSG 278
PLP S+R+ P L R R+ DG VD P G
Sbjct: 161 PLPSMSSRDAPCLQMRPRRQDGRLIVDAVVVRPRG 195
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -1
Query: 848 VXRXVPXNRSGTNNXTRSMRSCLAMRRCSGSAGGCRFFR*SACLCVLDKCSRL 690
V R + SG + + R A R C GSAG R R SA V+ + RL
Sbjct: 17 VGRPLGGGGSGADALRPAARLSFAPRWCGGSAGAARARRESAVTSVISRAPRL 69
>02_05_0943 +
32976990-32976996,32977119-32977464,32977586-32977796,
32977997-32978072,32978175-32978277,32978601-32978669,
32978785-32978821,32978904-32978978,32979052-32979103,
32979188-32979232,32979342-32979442
Length = 373
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -2
Query: 535 AVAAHPVRENRADRL--DGTEAGRRVRQTTRPRLQHGLPILEPPRSGCTCARARRLV 371
A A P EN + ++ D GR +T P QH L E SGCTC R++
Sbjct: 108 AAATVPPFENISPKMLADSMTLGRDNGRTREPVDQHSL---EENHSGCTCVAVPRII 161
>01_06_1788 -
39873900-39873986,39874009-39874137,39874180-39874246,
39874874-39874909,39875146-39875292,39875772-39875899,
39876349-39876435,39876523-39876633,39877433-39877600,
39877665-39877749,39877826-39877942,39878051-39878127,
39879981-39880077,39880175-39880377,39880519-39880645,
39880687-39880754,39880855-39880908,39880990-39881108,
39881651-39881729,39881803-39881865,39882113-39882232,
39882718-39882774,39882872-39882988,39883122-39883172,
39883262-39883360,39883438-39883583,39883740-39883887
Length = 928
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 559 VQTHKTFYHHANFLPQQILPATTQTTILRVPPLLHDVTLTLKEANREHLSSTHKHALHRK 738
V+ H HH P+Q T LR+ PL D L+ A + + + +K AL
Sbjct: 16 VEEHGAVRHHRPLTPRQQQQLRTVVESLRLDPLEVDEGARLEIARQSYRAGDYKAALEHC 75
Query: 739 N 741
N
Sbjct: 76 N 76
>01_01_1137 + 9017211-9018584
Length = 457
Score = 29.1 bits (62), Expect = 4.9
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -2
Query: 601 VRSLHGGKMSCESAQVAGGETSAVAAHPVREN-RADRLDGTEA--GRRVRQTTRPRLQHG 431
++ L G + + +VAGG V AHP+ E+ R R+ G A G TR G
Sbjct: 264 IKRLQSGIRARAAGKVAGGRVVRVEAHPIPEHPRPRRVVGRVALVGDAAGYVTR---CSG 320
Query: 430 LPILEPPRSGCTCARA 383
I RSG C RA
Sbjct: 321 EGIYFAARSGRLCGRA 336
>10_01_0028 -
359988-359996,360228-360332,360415-360536,360676-360763,
360988-361056,361132-361461,361544-361610,361695-361753,
361838-362056,362224-362289,362370-362500,362683-362782,
362864-363001,363111-363218,363627-363723,363806-364257
Length = 719
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 270 PSGATSLPTRTSPRCDAGSARSQSELFNDTSQSPTRRRALAQVQPER 410
PS A + PTRTS R A SA + ++ ++ S T RR A+ +P +
Sbjct: 6 PSSAAA-PTRTSTRKRAASASASAKATDEPSTKRT-RRPKAETKPRK 50
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 543 SPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEGSQPRTLVKHAQA 722
S PAT + + P +LLT+ TSH + N T S SH + S +L + +A
Sbjct: 685 SSPATASAAAASKKP-RLLTSQTTTSHTSTSNATTPRSFDTTSSHQDASFRESLPRQVRA 743
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 171 QPLPHPSNRNTPLLHGRNRQGDGTRAVDGTTEHPSGATSLPT-RTSPRCDAGS 326
QP P P + P G N+Q G R DGT G T T+P +GS
Sbjct: 452 QPQPQPQPQPQPPA-GANKQPPGPRMPDGTRGFAMGRGKPQTSTTTPSASSGS 503
>05_04_0389 -
20845490-20845600,20845697-20846006,20846097-20846242,
20846319-20846426,20846508-20846615,20846997-20847109,
20847340-20847437,20847530-20847714,20847811-20847953,
20848293-20848377,20848486-20848624,20848686-20848780,
20848894-20849037,20849114-20849206,20849310-20849376,
20849529-20849641,20849750-20849845,20853885-20854058
Length = 775
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +2
Query: 479 LRTVEAICPVLADWVGRDRGSLTSGYLCRLTRHFTTMQTSYRNKSYQPPRKLQFYGF 649
LR E I +A ++ R +GS S Y+ +F SY SY L Y F
Sbjct: 281 LRAPEDIAFAVALFIARKKGSFVSYYMYHGGTNFGRFAASYVTTSYYDGAPLDEYDF 337
>02_04_0142 + 20167876-20169108
Length = 410
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 607 QILPATTQTTILRVPPLLHDVTLT--LKEANREHLSSTHKH 723
+IL T ++ P LL + L+ LKE R+HL+S H H
Sbjct: 174 EILGRGTACQVVEHPELLEGMRLSGKLKEEARKHLNSKHLH 214
>02_02_0278 +
8500983-8501253,8501343-8501558,8501704-8501855,
8501949-8502222,8503569-8503754,8503939-8503976
Length = 378
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 576 ILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEG 686
+LPP KL ++ +H AN+ TG+T+L Y +G
Sbjct: 98 LLPPSKLKNSS--FAHGANFAITGATALDTPYFEAKG 132
>02_02_0156 -
7277793-7277875,7278535-7278638,7278808-7279211,
7279403-7279543,7279700-7279904,7279984-7280093
Length = 348
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +3
Query: 240 TRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDTSQSPTRRRALAQVQPERGG 416
TR D +H S + + + A S + F+DTS + ++ V PE G
Sbjct: 182 TRQADSVLKHSSSSPGITSLGKGTSVGSGAASDLDNFSDTSDRQSEAGSMLSVDPEISG 240
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,715,525
Number of Sequences: 37544
Number of extensions: 533490
Number of successful extensions: 1882
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1882
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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