Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C17
(887 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ488201-1|CAD32554.1| 2385|Homo sapiens steerin3 protein protein. 34 0.79
AF397731-1|AAM73757.1| 2282|Homo sapiens neuron navigator 3 prot... 34 0.79
AB023155-1|BAA76782.2| 1257|Homo sapiens KIAA0938 protein protein. 34 0.79
AY320566-1|AAQ21877.1| 77|Homo sapiens immunoglobulin kappa ch... 33 1.4
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 32 2.4
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 32 2.4
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 32 2.4
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 32 2.4
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 32 2.4
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 32 2.4
AF194411-1|AAL40181.1| 119|Homo sapiens immunoglobulin kappa li... 31 5.6
U44794-1|AAB50186.1| 124|Homo sapiens Ig kappa L-chain variable... 31 7.4
DQ101149-1|AAZ09154.1| 109|Homo sapiens immunoglobulin kappa li... 31 7.4
AY867261-1|AAW69132.1| 107|Homo sapiens anti-tetanus toxoid imm... 31 7.4
AJ426236-1|CAD19926.1| 87|Homo sapiens immunoglobulin kappa li... 31 7.4
AB064118-1|BAC01746.1| 276|Homo sapiens immunoglobulin kappa li... 31 7.4
AY867416-1|AAW69287.1| 108|Homo sapiens anti-tetanus toxoid imm... 30 9.8
AY393461-1|AAR32512.1| 150|Homo sapiens immunoglobulin heavy ch... 30 9.8
>AJ488201-1|CAD32554.1| 2385|Homo sapiens steerin3 protein protein.
Length = 2385
Score = 33.9 bits (74), Expect = 0.79
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = +3
Query: 147 SSKVSV*LQPLPHPSNRNTPLLHGRNRQGDGTRAVDGTTEHPS-GATSLPTRTSPRCDAG 323
SSK ++ + LP PS +T + GR T ++D S GAT+ R + G
Sbjct: 1128 SSKTTLQYRSLPRPSKSSTSGIPGRGGHRSSTSSIDSNVSSKSAGATTSKLREPTK--IG 1185
Query: 324 SARSQSELFNDTSQSPTRRRALAQVQPERGGSNIGSP 434
S RS N T + + GS SP
Sbjct: 1186 SGRSSPVTVNQTDKEKEKVAVSDSESVSLSGSPKSSP 1222
>AF397731-1|AAM73757.1| 2282|Homo sapiens neuron navigator 3 protein.
Length = 2282
Score = 33.9 bits (74), Expect = 0.79
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = +3
Query: 147 SSKVSV*LQPLPHPSNRNTPLLHGRNRQGDGTRAVDGTTEHPS-GATSLPTRTSPRCDAG 323
SSK ++ + LP PS +T + GR T ++D S GAT+ R + G
Sbjct: 1047 SSKTTLQYRSLPRPSKSSTSGIPGRGGHRSSTSSIDSNVSSKSAGATTSKLREPTK--IG 1104
Query: 324 SARSQSELFNDTSQSPTRRRALAQVQPERGGSNIGSP 434
S RS N T + + GS SP
Sbjct: 1105 SGRSSPVTVNQTDKEKEKVAVSDSESVSLSGSPKSSP 1141
>AB023155-1|BAA76782.2| 1257|Homo sapiens KIAA0938 protein protein.
Length = 1257
Score = 33.9 bits (74), Expect = 0.79
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = +3
Query: 147 SSKVSV*LQPLPHPSNRNTPLLHGRNRQGDGTRAVDGTTEHPS-GATSLPTRTSPRCDAG 323
SSK ++ + LP PS +T + GR T ++D S GAT+ R + G
Sbjct: 199 SSKTTLQYRSLPRPSKSSTSGIPGRGGHRSSTSSIDSNVSSKSAGATTSKLREPTK--IG 256
Query: 324 SARSQSELFNDTSQSPTRRRALAQVQPERGGSNIGSP 434
S RS N T + + GS SP
Sbjct: 257 SGRSSPVTVNQTDKEKEKVAVSDSESVSLSGSPKSSP 293
>AY320566-1|AAQ21877.1| 77|Homo sapiens immunoglobulin kappa chain
variable region protein.
Length = 77
Score = 33.1 bits (72), Expect = 1.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 196 RFEGWGSGCNYTETLELLSQGVWCVYAVDVYG 101
RF GWGSG ++T T+ L + VY YG
Sbjct: 40 RFSGWGSGTDFTLTISRLEPEDFAVYYCQQYG 71
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 225 RQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRALAQVQ 401
R+G A G + S AT +R+ G +RS++ + S++PTRRR+ ++
Sbjct: 550 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTP 609
Query: 402 PERGGSNIGSPCWRR 446
RG S +P RR
Sbjct: 610 ARRGRSRSRTPARRR 624
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 225 RQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRALAQVQ 401
R+G A G + S AT +R+ G +RS++ + S++PTRRR+ ++
Sbjct: 550 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTP 609
Query: 402 PERGGSNIGSPCWRR 446
RG S +P RR
Sbjct: 610 ARRGRSRSRTPARRR 624
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 225 RQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRALAQVQ 401
R+G A G + S AT +R+ G +RS++ + S++PTRRR+ ++
Sbjct: 550 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTP 609
Query: 402 PERGGSNIGSPCWRR 446
RG S +P RR
Sbjct: 610 ARRGRSRSRTPARRR 624
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 225 RQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRALAQVQ 401
R+G A G + S AT +R+ G +RS++ + S++PTRRR+ ++
Sbjct: 515 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTP 574
Query: 402 PERGGSNIGSPCWRR 446
RG S +P RR
Sbjct: 575 ARRGRSRSRTPARRR 589
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 225 RQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRALAQVQ 401
R+G A G + S AT +R+ G +RS++ + S++PTRRR+ ++
Sbjct: 340 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTP 399
Query: 402 PERGGSNIGSPCWRR 446
RG S +P RR
Sbjct: 400 ARRGRSRSRTPARRR 414
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 225 RQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRALAQVQ 401
R+G A G + S AT +R+ G +RS++ + S++PTRRR+ ++
Sbjct: 598 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTP 657
Query: 402 PERGGSNIGSPCWRR 446
RG S +P RR
Sbjct: 658 ARRGRSRSRTPARRR 672
>AF194411-1|AAL40181.1| 119|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 119
Score = 31.1 bits (67), Expect = 5.6
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2
Query: 196 RFEGWGSGCNYTETLELLSQGVWCVYAVDVYGFQ*PL 86
RF G GSG N+T T+ L + VY YG PL
Sbjct: 68 RFSGSGSGTNFTLTISRLEPEDFAVYYCQQYGRSPPL 104
>U44794-1|AAB50186.1| 124|Homo sapiens Ig kappa L-chain variable
region protein.
Length = 124
Score = 30.7 bits (66), Expect = 7.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 196 RFEGWGSGCNYTETLELLSQGVWCVYAVDVYG 101
RF G GSG ++T T+ L G + VY YG
Sbjct: 82 RFSGSGSGTDFTLTISRLEPGDFAVYYCQQYG 113
>DQ101149-1|AAZ09154.1| 109|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 109
Score = 30.7 bits (66), Expect = 7.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 196 RFEGWGSGCNYTETLELLSQGVWCVYAVDVYGFQ*P 89
RF G GSG ++T T+ L + + VY YG+ P
Sbjct: 62 RFSGSGSGTDFTLTISRLEREDFAVYYCQQYGYSLP 97
>AY867261-1|AAW69132.1| 107|Homo sapiens anti-tetanus toxoid
immunoglobulin light chain variable region protein.
Length = 107
Score = 30.7 bits (66), Expect = 7.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 196 RFEGWGSGCNYTETLELLSQGVWCVYAVDVYG 101
RF G GSG ++T T+ L G + VY YG
Sbjct: 62 RFSGSGSGTDFTLTISRLEPGDFAVYYCQQYG 93
>AJ426236-1|CAD19926.1| 87|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 87
Score = 30.7 bits (66), Expect = 7.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 196 RFEGWGSGCNYTETLELLSQGVWCVYAVDVYG 101
RF G GSG ++T T+ L G + VY YG
Sbjct: 43 RFSGSGSGTDFTLTISRLEPGDFAVYYCQQYG 74
>AB064118-1|BAC01746.1| 276|Homo sapiens immunoglobulin kappa light
chain VLJ region protein.
Length = 276
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -2
Query: 196 RFEGWGSGCNYTETLELLSQGVWCVYAVDVYGFQ*PLNXKVG 71
RF G GSG ++T T+ L + VY YG P VG
Sbjct: 84 RFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPWGPSVG 125
>AY867416-1|AAW69287.1| 108|Homo sapiens anti-tetanus toxoid
immunoglobulin light chain variable region protein.
Length = 108
Score = 30.3 bits (65), Expect = 9.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 196 RFEGWGSGCNYTETLELLSQGVWCVYAVDVYG 101
RF G GSG ++T T+ L G + VY YG
Sbjct: 62 RFSGSGSGTDFTLTISRLEPGDFAVYYCHQYG 93
>AY393461-1|AAR32512.1| 150|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 150
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 355 SLNNSDCDRALPASQRGDVLVGKDVAPDGCSVVPSTARVPSPCLF 221
SL SD ASQ GD L G D+ G +V S+A P +F
Sbjct: 81 SLKASDTAIYYCASQEGDKLFGMDLWGQGTTVTVSSASTKGPSVF 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,930,083
Number of Sequences: 237096
Number of extensions: 2777009
Number of successful extensions: 11782
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11781
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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