Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C16
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 40 0.003
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 38 0.014
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 37 0.018
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659... 33 0.23
01_01_0595 - 4430738-4430785,4430904-4432679 32 0.69
11_05_0009 - 18349593-18350477 31 0.92
10_07_0100 + 12861588-12862601 31 1.2
11_06_0610 - 25449085-25453284 31 1.6
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409... 31 1.6
03_01_0238 + 1854070-1854344,1854621-1854712,1854852-1855045,185... 31 1.6
10_08_0826 - 20840445-20840504,20840692-20840778,20841344-20841706 30 2.1
09_02_0468 - 9608922-9610061 30 2.8
04_04_0706 + 27419215-27419371,27419521-27419734,27419818-274199... 30 2.8
02_04_0331 - 22087692-22087946,22088060-22088179,22088338-220884... 30 2.8
05_06_0279 + 26896997-26897457,26898100-26898220,26898310-268985... 29 3.7
12_02_1217 + 27082452-27083593,27085041-27085158 29 4.9
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 29 4.9
03_05_1040 + 29883071-29883212,29883372-29883439,29883504-29883806 29 4.9
02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735 29 4.9
10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010 29 6.5
03_04_0162 + 17858802-17861168 29 6.5
10_06_0145 + 11215895-11216860 28 8.5
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 28 8.5
03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484 28 8.5
02_02_0298 - 8713660-8714073 28 8.5
01_03_0086 - 12316010-12316162,12316626-12316712,12316810-123169... 28 8.5
01_03_0015 + 11669321-11670070 28 8.5
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 39.9 bits (89), Expect = 0.003
Identities = 34/125 (27%), Positives = 52/125 (41%)
Frame = +3
Query: 96 EQFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNM 275
+Q GF + C+ + ++ + RK T + D AKAFD V L L
Sbjct: 5 DQTGF-LKGRCISENLIYATELIQACHARK-CQTLIIKLDFAKAFDSVNWQSLFQILSVK 62
Query: 276 GVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPE 455
G PD + I++ L + G + G+ QG LSP LF L + + R E
Sbjct: 63 GFPDNWISWIKNLLQTSKSAVLLHGIPGKWITCKKGLRQGDPLSPYLFILVADVLQRLLE 122
Query: 456 THLAL 470
+L +
Sbjct: 123 RNLQI 127
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 37.5 bits (83), Expect = 0.014
Identities = 56/222 (25%), Positives = 86/222 (38%), Gaps = 14/222 (6%)
Frame = +3
Query: 27 KLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGAL 206
K+ ++L RL V I +D Q GF + C+ + ++ RRK T +
Sbjct: 999 KILSKVLATRL-QRVFLRMIHLD-QTGF-LKGRCISENLIYATELIQACYRRK-CQTIIV 1054
Query: 207 FFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGV 386
D KAFD V + L L G P+ + I+ LS+ + G R G+
Sbjct: 1055 KLDFTKAFDSVIWSSLFKILAVRGFPENWISWIKGLLSSSKSAVLLNGVPGRWICCKKGL 1114
Query: 387 PQGSALSPLLFSLYINDIPRSPETHLAL--------------FADDTAIYYSCRKKALLH 524
QG LS LF L + + R E + + +ADDT I Y + +L
Sbjct: 1115 LQGDPLSSYLFILVADVLQRLLERNTEIRHAIYQDRPCTTIQYADDTLIIYRAEEADVL- 1173
Query: 525 RRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 650
T+ Q+ + + IN KST + + LS
Sbjct: 1174 ----ALKETLLQFSKATGLQINFAKSTMITLNVDQSKELVLS 1211
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 37.1 bits (82), Expect = 0.018
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +3
Query: 204 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 383
L D KAFD + H+ ++ + +MG P + + ++ S S + G G
Sbjct: 454 LKLDFEKAFDTIEHSAILSVMQHMGFPLKWIEWVQMVFSTASSAVLLNGVPGNSFKCRRG 513
Query: 384 VPQGSALSPLLFSL 425
V QG LS LLF L
Sbjct: 514 VRQGVPLSLLLFVL 527
>02_02_0604 -
12064451-12065683,12065729-12065827,12065858-12065955,
12066782-12066924,12067233-12067729
Length = 689
Score = 33.5 bits (73), Expect = 0.23
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Frame = +3
Query: 333 RYRVEGTRSRPRHVTAGVPQGSALSPLLFSL---------YINDIPRSPETHLALFADDT 485
R + GT S P G+ QG LSPLLF L +N R+P +L+ADD
Sbjct: 216 RIDINGTLSDPFKPMRGLRQGDPLSPLLFVLKAMSAGLLDKVNQWSRAPNN--SLYADDA 273
Query: 486 AIYY--SCRKKALL 521
I++ C ++ +L
Sbjct: 274 VIFFKPGCNEEEVL 287
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 31.9 bits (69), Expect = 0.69
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 346 RERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGLRR---PIWRSSPMTPPSTTRVGRRR 516
R+ P +S +APPSP+ + +S P +R P SP PPS G R
Sbjct: 209 RDAAVSPSIPAKKSARAPPSPKDTAAPVSVCLPSNKRVMPPFLPPSP--PPSKESDGARV 266
Query: 517 CFIDDFRPQ 543
+ + +PQ
Sbjct: 267 AAVKEAKPQ 275
>11_05_0009 - 18349593-18350477
Length = 294
Score = 31.5 bits (68), Expect = 0.92
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +1
Query: 331 SDIESRERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG- 507
+++E + +PG ++P R P PR + +S + + IWR SP P+T +G
Sbjct: 57 ANLEPVDELPG--LAEPGVRPNPSRPRSATRSLSPRHV-TKTTIWRDSPARRPTTGELGL 113
Query: 508 --RRRCFIDDFRPQLPP 552
R F DD + PP
Sbjct: 114 LKARILFQDDEKAAPPP 130
>10_07_0100 + 12861588-12862601
Length = 337
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +1
Query: 376 QPESRKAPPSPRYYSVCISTIYPG-----LRRPIWRSSPMTPPSTTRVGRRR 516
+P +++ SP Y ST P RRP +P TPP+TT R R
Sbjct: 180 RPSAQRPACSPDYPEPACSTAPPSSSSSYARRPCHAKTPRTPPTTTTTARAR 231
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = +3
Query: 633 PNTTLSIPLPTRRVNNPPPPFXQSRCSTSPYRGPRRSNI*ASPRQ*DDIPPP 788
P + S P P + ++PPPP + + P P +P PPP
Sbjct: 645 PPSEKSPPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSPPP 696
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/52 (26%), Positives = 20/52 (38%)
Frame = +3
Query: 633 PNTTLSIPLPTRRVNNPPPPFXQSRCSTSPYRGPRRSNI*ASPRQ*DDIPPP 788
P S P P + ++PPPP + + P P +P PPP
Sbjct: 612 PPAEKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSPPP 663
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/52 (28%), Positives = 20/52 (38%)
Frame = +3
Query: 633 PNTTLSIPLPTRRVNNPPPPFXQSRCSTSPYRGPRRSNI*ASPRQ*DDIPPP 788
P T S P P ++PPPP + + P P +P PPP
Sbjct: 678 PPTEKSPPTPESESSSPPPPAPEGHMPSPPKSTPPVEKSPPTPESEASSPPP 729
>03_06_0642 +
35239658-35240083,35240167-35240238,35240305-35240919,
35241253-35241435,35241604-35241663,35241733-35241936,
35242497-35242745,35243609-35243707,35243760-35243858,
35244463-35244480,35244668-35244862,35244981-35245073,
35245265-35245531,35245884-35246102
Length = 932
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 657 LPTRRVNNPPPPFXQSRCSTSPYRGP-RRSNI*ASPRQ*DDIPPPHQ 794
LP+ R P PF + S++PY P RR R +PPP Q
Sbjct: 25 LPSSRARTPRAPFPSTSRSSNPYSFPDRRPPPTPRSRSRSPLPPPEQ 71
>03_01_0238 +
1854070-1854344,1854621-1854712,1854852-1855045,
1855529-1855568,1855734-1855815,1856972-1857049,
1857144-1857269,1857544-1857665,1858018-1858057,
1858250-1858324,1858414-1858585
Length = 431
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 486 AIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTL-SIPLP 662
AI CR + RRL AA + +WRID N K A R R T + S+P P
Sbjct: 32 AIRCCCRAQQEPRRRLSKAAAAAPERTEEWRIDGN--KPAAAARGRRRASLTAMPSLPFP 89
Query: 663 TRR 671
+ R
Sbjct: 90 SPR 92
>10_08_0826 - 20840445-20840504,20840692-20840778,20841344-20841706
Length = 169
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +1
Query: 316 CRTVRSDIESRERVPGPVTSQPESRKAPPSP---RYYSV-CISTIYPGLRRPIWRSSPMT 483
CRT ES + PG P +AP +P R + V +S L R WR P
Sbjct: 45 CRTPTGG-ESNLKAPGTCPPAPRKPRAPAAPCRKRLFEVEVLSLRLEELERLFWRPPP-- 101
Query: 484 PPSTTR 501
PP TT+
Sbjct: 102 PPPTTQ 107
>09_02_0468 - 9608922-9610061
Length = 379
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 627 RPPNTTLSIPLPTRRVNNPPPPFXQSRC 710
RPP + P P RV PPPP RC
Sbjct: 281 RPPIAVPAAPQPENRVAPPPPPPRARRC 308
>04_04_0706 +
27419215-27419371,27419521-27419734,27419818-27419913,
27420006-27420123,27420211-27420384,27420633-27420803,
27420932-27420987,27421125-27421214,27421296-27421444,
27421640-27421722,27421830-27421958,27422063-27422137,
27422248-27422416,27422965-27423104,27423191-27423298,
27423603-27423783,27424445-27424542,27424639-27424728,
27424881-27425034,27425376-27425431,27425483-27425533,
27425651-27425732,27425821-27425995,27426748-27426823,
27426951-27427121,27427198-27427269,27427350-27427454,
27427948-27428037,27428703-27428908,27428989-27429190,
27429294-27429473,27429858-27429925,27430005-27430341,
27430428-27430637,27430765-27431448,27431537-27431940,
27432495-27432542,27432777-27433023,27433381-27433602,
27433796-27434026
Length = 2122
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 323 VRQVVSYDEHESVWHSHVIQFVYQTVVPDFVERLRY 216
V +V Y + HSH+I+ V + FVER+ Y
Sbjct: 352 VESLVGYSSSDDSCHSHLIEIVETLNIEKFVERIVY 387
>02_04_0331 -
22087692-22087946,22088060-22088179,22088338-22088439,
22088523-22088582,22088657-22088709,22088790-22088875,
22089060-22089104,22089484-22089565,22089670-22089784
Length = 305
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 99 ARL*EFYSRIRSPRGVYEGAVRIVCLSPGGDLV 1
ARL EF +R S G G RIVC++ GG V
Sbjct: 26 ARLGEFIARNSSAAGAGGGGRRIVCVTSGGTTV 58
>05_06_0279 +
26896997-26897457,26898100-26898220,26898310-26898586,
26898735-26898895
Length = 339
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 326 FVPISSRGNAFPAPSRHSRSPARLRPLPVTIQFVYQRYTPVS 451
F+P ++ G+A AP+R R+P R R +P T+ R P++
Sbjct: 53 FLPAAA-GSACEAPARKKRTPGRWRRIPRTLPHPCLRKRPMT 93
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YTNCITWECQTDSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSP 408
Y ++ C T +CS E V SD + + G + + R PP P
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDLYGGELEEEDSPRPPPPRP 77
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/66 (33%), Positives = 27/66 (40%)
Frame = +3
Query: 591 PTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPPPPFXQSRCSTSPYRGPRRSNI*ASPRQ* 770
P+ S+ R R P + P+P PPPP +SR S SP S A P
Sbjct: 285 PSCSSDTAASRSRLPELSKLPPIPPPPPPPPPPPMPRSR-SASPSPSTSSSGS-AGPPAP 342
Query: 771 DDIPPP 788
PPP
Sbjct: 343 PPPPPP 348
>03_05_1040 + 29883071-29883212,29883372-29883439,29883504-29883806
Length = 170
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 600 STAVLFKRGRPPNTTLSIPLPTRR 671
S FKRG PP + +PLP R+
Sbjct: 118 SNGYAFKRGNPPEGIVEVPLPPRQ 141
>02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735
Length = 738
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +1
Query: 304 YETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGL 450
Y TT R + + E PG S ESR +PP P Y C S++Y L
Sbjct: 225 YSTTSRRYERFV-ALEEAPG---SYDESRFSPPFPYDYLYCGSSLYGNL 269
>10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010
Length = 520
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = -2
Query: 389 RDSGCDVTGPGTRSLDSISERTVRQVVSYDEHESVWHSHVIQFVYQTVVPDFVERLR 219
+ SGC++ G TR + +++ + + +EHE+ +S ++ ++ + D +RLR
Sbjct: 78 KHSGCEIVGEETRKVCNVTMEHLEKSSLSEEHEAPSYSQALRCTPESSL-DSTKRLR 133
>03_04_0162 + 17858802-17861168
Length = 788
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 642 TLSIPLPTRRVNNPPPPFXQSRCSTSPYRGPRRS 743
T+++PLP + PPPF +R T+ GP RS
Sbjct: 682 TITVPLPRSSSSAAPPPFTVNRTVTNV--GPARS 713
>10_06_0145 + 11215895-11216860
Length = 321
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 292 SCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPR 411
S S TT +D+ S P P +S + PP+PR
Sbjct: 240 SVSEASTTTTADAADVSSTGSSPSPTSSNQAATATPPAPR 279
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 348 GTRSRPRHVTAGVPQGSALSP 410
G RSRPR AG PQ +A SP
Sbjct: 156 GRRSRPRRCLAGRPQATAGSP 176
>03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484
Length = 663
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 213 DIAKAFDKVWHNGLIYKLYNMG-VPDRLVL 299
D+A+AF+ V H G + +YN+G V +R V+
Sbjct: 230 DVAEAFEVVLHKGEVGHVYNIGTVKERRVI 259
>02_02_0298 - 8713660-8714073
Length = 137
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 213 RRRGLLSEWVSACSALVRCAP*GGALDGRTSVWR 112
R RGLL+ +A A CA G DG WR
Sbjct: 85 RNRGLLTTAAAAGDACAACAAGAGGGDGADGCWR 118
>01_03_0086 -
12316010-12316162,12316626-12316712,12316810-12316942,
12317057-12317330,12317588-12317714,12317815-12318071,
12319055-12319139
Length = 371
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +2
Query: 320 EPFVPISSRGNAF----PAPSRHSRSPARLRPLPVTI 418
+P+VPI G + P P SRSP R LP+ +
Sbjct: 20 DPYVPIPDPGGNYGRSKPGPPAPSRSPPTSRNLPIAV 56
>01_03_0015 + 11669321-11670070
Length = 249
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 275 GSARQTRAHHTRLLVEPFVPISSRG-NAFPAPSRHSRSPARLRPLPVTI 418
G +R TR RLL + + PAPS PA LR LPV +
Sbjct: 88 GDSRTTRRRERRLLRSLAIGAGDDDRDGGPAPSPRGLDPAVLRALPVVV 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,037,293
Number of Sequences: 37544
Number of extensions: 669581
Number of successful extensions: 2693
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2678
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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