Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C16
(876 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 157 1e-38
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 149 4e-36
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 147 2e-35
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 147 2e-35
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 146 3e-35
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 146 3e-35
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 146 3e-35
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 146 3e-35
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 140 2e-33
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 139 5e-33
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 138 9e-33
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 138 9e-33
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 138 9e-33
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 137 2e-32
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 135 9e-32
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 133 3e-31
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 133 3e-31
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 133 3e-31
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 133 3e-31
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 133 3e-31
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 118 1e-26
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 92 8e-19
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 77 4e-14
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 74 2e-13
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 53 5e-07
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 48 2e-05
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 40 0.003
AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p pro... 29 8.4
AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-P... 29 8.4
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 157 bits (382), Expect = 1e-38
Identities = 86/208 (41%), Positives = 123/208 (59%), Gaps = 8/208 (3%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL ++ KL+ERL+ RL D ++ +IL D QFGFR HS V QVHRLT+HIL + +
Sbjct: 517 ISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDK 576
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSR 362
+ A+F D+ +AFD+VWH+GLI K+ + P +++ YL +R F RV + S
Sbjct: 577 E--YCNAVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSI 633
Query: 363 PRHVTAGVPQGSALSPLLFSLYINDIPRSPETH--------LALFADDTAIYYSCRKKAL 518
PR + AGVPQGS L PLL+S++ D+P H LA +ADD A+ YS
Sbjct: 634 PRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNE 693
Query: 519 LHRRLQTAATTMGQWFRKWRIDINPTKS 602
R LQ TT+ W ++W + +NP K+
Sbjct: 694 AARGLQEYLTTLAAWCKRWILKVNPQKT 721
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 149 bits (362), Expect = 4e-36
Identities = 87/228 (38%), Positives = 124/228 (54%), Gaps = 8/228 (3%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LLP+I K++ERL+ R+ + A I + QFGFRA H V Q+HR+ E IL + +
Sbjct: 516 ISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSK 575
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSR 362
+ +LF DI +AFD+VWH GL K+ +P +++ YL R F R S
Sbjct: 576 E--YCNSLFLDIREAFDRVWHIGLQLKI-KQTLPAPYFGLLKSYLEGRRFAVRFHSAIST 632
Query: 363 PRHVTAGVPQGSALSPLLFSLYINDIPRSP-----ETHLALFADDTAIYYSCRKKALLHR 527
+V AGVPQGS L PLL+ LY +D+P+ ++ LA FADD + Y R +
Sbjct: 633 EHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAAD 692
Query: 528 RLQTAATTMGQWFRKWRIDINPTKSTAVLF--KRGRPPNTTL-SIPLP 662
+Q A +W R+W I IN +KS V F KR PP + +P+P
Sbjct: 693 GIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKRRTPPPVYIEEVPVP 740
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 147 bits (357), Expect = 2e-35
Identities = 71/211 (33%), Positives = 127/211 (60%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + K+ E+L++ RL F+ + L Q+GFR + + +L +I + +
Sbjct: 541 ISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSK 600
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSR 362
+ + G + DI AFD VWH+GL++KL +G P L+ I++++L++R F + ++S
Sbjct: 601 QSV--GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSA 658
Query: 363 PRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTA 542
R + AGVPQGS L P LF+++ +DIP++ L+LFADD A+Y + + +++ +Q+
Sbjct: 659 RRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSY 718
Query: 543 ATTMGQWFRKWRIDINPTKSTAVLFKRGRPP 635
+ +++KW+I INP K+ A+ F + R P
Sbjct: 719 LNELDIYYKKWKIKINPNKTNAIFFTKRRKP 749
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 147 bits (357), Expect = 2e-35
Identities = 71/211 (33%), Positives = 127/211 (60%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + K+ E+L++ RL F+ + L Q+GFR + + +L +I + +
Sbjct: 489 ISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSK 548
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSR 362
+ + G + DI AFD VWH+GL++KL +G P L+ I++++L++R F + ++S
Sbjct: 549 QSV--GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSA 606
Query: 363 PRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTA 542
R + AGVPQGS L P LF+++ +DIP++ L+LFADD A+Y + + +++ +Q+
Sbjct: 607 RRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSY 666
Query: 543 ATTMGQWFRKWRIDINPTKSTAVLFKRGRPP 635
+ +++KW+I INP K+ A+ F + R P
Sbjct: 667 LNELDIYYKKWKIKINPNKTNAIFFTKRRKP 697
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 146 bits (355), Expect = 3e-35
Identities = 89/236 (37%), Positives = 127/236 (53%), Gaps = 17/236 (7%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + KL ER+L KRL+D S K + QFGFR H HQ+ R+T+ IL + +
Sbjct: 117 ISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEK 176
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEG-TRS 359
A F DI +AFD+VWH+GL+YKL + +P L ++ +YLSNR+F R++G T S
Sbjct: 177 DVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTS 233
Query: 360 RPRHVTAGVPQGSALSPLLFSLYINDIPRS-----------PETH-----LALFADDTAI 491
R ++ AGVPQGS L P+L+S+Y +D+P P+ H LA +ADDT I
Sbjct: 234 RIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTII 293
Query: 492 YYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPL 659
+ L Q +W +KW I IN K+ +LF + + PL
Sbjct: 294 LSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPL 349
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 146 bits (355), Expect = 3e-35
Identities = 89/236 (37%), Positives = 127/236 (53%), Gaps = 17/236 (7%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + KL ER+L KRL+D S K + QFGFR H HQ+ R+T+ IL + +
Sbjct: 564 ISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEK 623
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEG-TRS 359
A F DI +AFD+VWH+GL+YKL + +P L ++ +YLSNR+F R++G T S
Sbjct: 624 DVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTS 680
Query: 360 RPRHVTAGVPQGSALSPLLFSLYINDIPRS-----------PETH-----LALFADDTAI 491
R ++ AGVPQGS L P+L+S+Y +D+P P+ H LA +ADDT I
Sbjct: 681 RIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTII 740
Query: 492 YYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPL 659
+ L Q +W +KW I IN K+ +LF + + PL
Sbjct: 741 LSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPL 796
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 146 bits (355), Expect = 3e-35
Identities = 89/236 (37%), Positives = 127/236 (53%), Gaps = 17/236 (7%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + KL ER+L KRL+D S K + QFGFR H HQ+ R+T+ IL + +
Sbjct: 564 ISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEK 623
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEG-TRS 359
A F DI +AFD+VWH+GL+YKL + +P L ++ +YLSNR+F R++G T S
Sbjct: 624 DVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTS 680
Query: 360 RPRHVTAGVPQGSALSPLLFSLYINDIPRS-----------PETH-----LALFADDTAI 491
R ++ AGVPQGS L P+L+S+Y +D+P P+ H LA +ADDT I
Sbjct: 681 RIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTII 740
Query: 492 YYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPL 659
+ L Q +W +KW I IN K+ +LF + + PL
Sbjct: 741 LSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPL 796
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 146 bits (355), Expect = 3e-35
Identities = 89/236 (37%), Positives = 127/236 (53%), Gaps = 17/236 (7%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + KL ER+L KRL+D S K + QFGFR H HQ+ R+T+ IL + +
Sbjct: 564 ISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEK 623
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEG-TRS 359
A F DI +AFD+VWH+GL+YKL + +P L ++ +YLSNR+F R++G T S
Sbjct: 624 DVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTS 680
Query: 360 RPRHVTAGVPQGSALSPLLFSLYINDIPRS-----------PETH-----LALFADDTAI 491
R ++ AGVPQGS L P+L+S+Y +D+P P+ H LA +ADDT I
Sbjct: 681 RIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTII 740
Query: 492 YYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPL 659
+ L Q +W +KW I IN K+ +LF + + PL
Sbjct: 741 LSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPL 796
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 140 bits (340), Expect = 2e-33
Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 3/223 (1%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + KL+E++L R+ + N L QFGFR +H + QV+R+T I R
Sbjct: 512 ISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHR 571
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSR 362
+ A+F D+A+AFD+VW +GL++K+ + +P +++ YL NR F R + + SR
Sbjct: 572 EYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSR 628
Query: 363 PRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTA 542
+ AGVPQGS L P+L++LY D P + FADDTAI + L
Sbjct: 629 DCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRH 688
Query: 543 ATTMGQWFRKWRIDINPTKSTAVLF---KRGRPPNTTLSIPLP 662
T++ +W WRI IN K V F K+ PP +I +P
Sbjct: 689 LTSVERWLADWRISINVQKCKQVTFTLNKQTCPPLVLNNICIP 731
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 139 bits (336), Expect = 5e-33
Identities = 80/226 (35%), Positives = 118/226 (52%), Gaps = 10/226 (4%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LLP++GK+ ERL+ RL K + QFGFR +H Q+HR+ L +
Sbjct: 320 ISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMEN- 378
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSR 362
K GA F DI +AFD+VWH GL+YK + P +L L+++ +L R+F V+G +S
Sbjct: 379 KEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSS 436
Query: 363 PRHVTAGVPQGSALSPLLFSLYINDIP-RSPETH-------LALFADDTAIYYSCRKKAL 518
+ + AGVPQGS L P L+S++ +D+P +P T +A +ADDTA+ +
Sbjct: 437 IKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILA 496
Query: 519 LHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF--KRGRPPNTTLS 650
LQ QW W + IN K V F + G P +L+
Sbjct: 497 ATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLN 542
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 138 bits (334), Expect = 9e-33
Identities = 80/224 (35%), Positives = 117/224 (52%), Gaps = 10/224 (4%)
Frame = +3
Query: 9 LLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKP 188
LLP++GK+ ERL+ RL K + QFGFR +H Q+HR+ L + K
Sbjct: 520 LLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMEN-KE 578
Query: 189 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 368
GA F DI +AFD+VWH GL+YK + P +L L+++ +L R+F V+G +S +
Sbjct: 579 YAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIK 636
Query: 369 HVTAGVPQGSALSPLLFSLYINDIP-RSPETH-------LALFADDTAIYYSCRKKALLH 524
+ AGVPQGS L P L+S++ +D+P +P T +A +ADDTA+ +
Sbjct: 637 PIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAAT 696
Query: 525 RRLQTAATTMGQWFRKWRIDINPTKSTAVLF--KRGRPPNTTLS 650
LQ QW W + IN K V F + G P +L+
Sbjct: 697 SGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLN 740
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 138 bits (334), Expect = 9e-33
Identities = 80/223 (35%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL I KL+E+ L RL + + I+ QFGFR H + QV+R+T I R
Sbjct: 514 ISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRTAFEYR 573
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSR 362
+ A+F D+++AFDKVW +GL++K+ + +P+ +++ YL +R F R S
Sbjct: 574 EYCT--AVFLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATST 630
Query: 363 PRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTA 542
+ AGVPQGS L P L+ +Y DIP + ++ FADDTAI R +L
Sbjct: 631 VHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALY 690
Query: 543 ATTMGQWFRKWRIDINPTKSTAVLFKRGR---PPNTTLSIPLP 662
+ +W WRI +N K V F R PP SIPLP
Sbjct: 691 LIDIKKWLSDWRIKVNEQKCKHVTFTLNRQDCPPLLLNSIPLP 733
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 138 bits (334), Expect = 9e-33
Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 3/223 (1%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + KL+E++L R+ + N L QFGFR +H + QV+R+T I R
Sbjct: 512 ISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHR 571
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSR 362
+ A+F D+A+AFD+VW +GL++K+ + +P +++ YL N F R + + SR
Sbjct: 572 EYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSR 628
Query: 363 PRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTA 542
+ AGVPQGS L P+L++LY D P + FADDTAI + L
Sbjct: 629 DCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRH 688
Query: 543 ATTMGQWFRKWRIDINPTKSTAVLF---KRGRPPNTTLSIPLP 662
T++ +W WRI IN K V F K+ PP +I +P
Sbjct: 689 LTSVERWLADWRISINVQKCKQVTFTLNKQTCPPLVLNNICIP 731
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 137 bits (331), Expect = 2e-32
Identities = 83/224 (37%), Positives = 121/224 (54%), Gaps = 11/224 (4%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + K++ERLL KRL+ K + QFGFR H Q+ R+T+ IL R+
Sbjct: 573 ISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERK 632
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRS 359
+ A+F DI++AFD+VWH GL+ KL + +P L +I+ YL+NR+F + + G S
Sbjct: 633 E--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETS 689
Query: 360 RPRHVTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL--FADDTAIYYSCRKKA 515
R + AGVPQGS L PLL+S++ +D+P SP + L +ADDT + S
Sbjct: 690 RTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLAT 749
Query: 516 LLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF--KRGRPPNT 641
R + T W KW I +N K+ V+F K P N+
Sbjct: 750 AATRNNENYLKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTNS 793
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 135 bits (326), Expect = 9e-32
Identities = 79/214 (36%), Positives = 117/214 (54%), Gaps = 9/214 (4%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + K++ERLL KRL+ K + QFGFR H Q+ R+T+ IL R+
Sbjct: 561 ISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEAFERK 620
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRS 359
+ A+F DI++AFD+VWH GL+ KL + +P L +I+ YL+NR+F + + G S
Sbjct: 621 E--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETS 677
Query: 360 RPRHVTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL--FADDTAIYYSCRKKA 515
R + AGVPQGS L PLL+S++ +D+P SP + L +ADDT + S
Sbjct: 678 RTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLAT 737
Query: 516 LLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 617
R + + W KW I +N K+ V+F
Sbjct: 738 AATRNNENYLKSFSDWADKWGISVNAAKTGHVIF 771
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 133 bits (322), Expect = 3e-31
Identities = 78/214 (36%), Positives = 117/214 (54%), Gaps = 9/214 (4%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + K++ERLL KRL+ K + QFGFR H Q+ R+T+ IL R+
Sbjct: 445 ISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERK 504
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRS 359
+ A+F DI++AFD+VWH GL+ KL + +P L +I+ YL+NR+F + + G S
Sbjct: 505 E--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETS 561
Query: 360 RPRHVTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL--FADDTAIYYSCRKKA 515
R + AGVPQGS L P+L+S++ +D+P SP + L +ADDT + S
Sbjct: 562 RAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILAT 621
Query: 516 LLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 617
R + T W KW I +N K+ V++
Sbjct: 622 AATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 655
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 133 bits (322), Expect = 3e-31
Identities = 78/214 (36%), Positives = 117/214 (54%), Gaps = 9/214 (4%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + K++ERLL KRL+ K + QFGFR H Q+ R+T+ IL R+
Sbjct: 561 ISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERK 620
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRS 359
+ A+F DI++AFD+VWH GL+ KL + +P L +I+ YL+NR+F + + G S
Sbjct: 621 E--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETS 677
Query: 360 RPRHVTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL--FADDTAIYYSCRKKA 515
R + AGVPQGS L P+L+S++ +D+P SP + L +ADDT + S
Sbjct: 678 RAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILAT 737
Query: 516 LLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 617
R + T W KW I +N K+ V++
Sbjct: 738 AATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 133 bits (322), Expect = 3e-31
Identities = 78/214 (36%), Positives = 117/214 (54%), Gaps = 9/214 (4%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + K++ERLL KRL+ K + QFGFR H Q+ R+T+ IL R+
Sbjct: 561 ISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERK 620
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRS 359
+ A+F DI++AFD+VWH GL+ KL + +P L +I+ YL+NR+F + + G S
Sbjct: 621 E--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETS 677
Query: 360 RPRHVTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL--FADDTAIYYSCRKKA 515
R + AGVPQGS L P+L+S++ +D+P SP + L +ADDT + S
Sbjct: 678 RAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILAT 737
Query: 516 LLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 617
R + T W KW I +N K+ V++
Sbjct: 738 AATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 133 bits (322), Expect = 3e-31
Identities = 78/214 (36%), Positives = 117/214 (54%), Gaps = 9/214 (4%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + K++ERLL KRL+ K + QFGFR H Q+ R+T+ IL R+
Sbjct: 523 ISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERK 582
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRS 359
+ A+F DI++AFD+VWH GL+ KL + +P L +I+ YL+NR+F + + G S
Sbjct: 583 E--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETS 639
Query: 360 RPRHVTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL--FADDTAIYYSCRKKA 515
R + AGVPQGS L P+L+S++ +D+P SP + L +ADDT + S
Sbjct: 640 RAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILAT 699
Query: 516 LLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 617
R + T W KW I +N K+ V++
Sbjct: 700 AATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 733
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 133 bits (322), Expect = 3e-31
Identities = 78/214 (36%), Positives = 117/214 (54%), Gaps = 9/214 (4%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + K++ERLL KRL+ K + QFGFR H Q+ R+T+ IL R+
Sbjct: 561 ISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERK 620
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRS 359
+ A+F DI++AFD+VWH GL+ KL + +P L +I+ YL+NR+F + + G S
Sbjct: 621 E--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETS 677
Query: 360 RPRHVTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL--FADDTAIYYSCRKKA 515
R + AGVPQGS L P+L+S++ +D+P SP + L +ADDT + S
Sbjct: 678 RAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILAT 737
Query: 516 LLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 617
R + T W KW I +N K+ V++
Sbjct: 738 AATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 118 bits (283), Expect = 1e-26
Identities = 61/163 (37%), Positives = 94/163 (57%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL + KL+E+ L R+ + + L QF F A+H + QV+R+T I R
Sbjct: 53 ISLLTCLSKLFEKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHR 112
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSR 362
+ ALF D+A+AFD+VW +GL++K+ + +P + +++ YL R F R + S
Sbjct: 113 EYCT--ALFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSS 169
Query: 363 PRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAI 491
+ AGVPQGS L P+L++LY DIP + + + FADDTAI
Sbjct: 170 DFTIEAGVPQGSVLGPILYTLYTADIPTNYQLTIFTFADDTAI 212
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 92.3 bits (219), Expect = 8e-19
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL +GK E+++ +RL F+ + ++ Q F++ HS + + R+ L+ +
Sbjct: 516 ISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNALSTK 575
Query: 183 KPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSR 362
+ L D +AFD+V + ++ +L G+ RL +I+ +++NRSFR R+ S
Sbjct: 576 NHV--SILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSN 633
Query: 363 PRHVTAGVPQGSALSPLLFSLYINDI----PRSPETHLALFADDTAIYYSCRKKALLHRR 530
+ G+PQGS LS +LF + I DI R + +++L+ADD I+ + + +
Sbjct: 634 SHILHNGIPQGSPLSVVLFMIAIEDINDIVTRHKDIYISLYADDAIIFTKIKNINTVREK 693
Query: 531 LQTAATTMGQW 563
+ W
Sbjct: 694 FLEILQEINSW 704
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 76.6 bits (180), Expect = 4e-14
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
L LL +GKL+ER+L R+ + L +Q+GFR S + + +T+ L+
Sbjct: 482 LCLLDIVGKLFERILYARIELITESPTGLQGQQYGFRKGKSTLDALKSVTDAARKALDGN 541
Query: 183 KPIPTGALF-----FDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE 347
+ + + D+ AF+ ++ + N+GVPD + +I +Y +R Y E
Sbjct: 542 RWLGGSKKYCAIITLDVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTE 601
Query: 348 -GTRSRPRHVTAGVPQGSALSPLLFSLYINDI-----PRSPETHLALFADDTAIYYSCRK 509
G RS V+AGVPQGS L P+L+++ + I PR E H FADD AI +
Sbjct: 602 DGPRSH--QVSAGVPQGSVLGPILWNIMYDGILSISKPRGVELH--CFADDVAITAVAKT 657
Query: 510 KALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVL 614
L A T +W K + I K+ VL
Sbjct: 658 IPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVL 692
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 74.1 bits (174), Expect = 2e-13
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Frame = +3
Query: 21 IGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTG 200
I K+ ++++ KRLW V+ N ++ D+QFGF+ S ++++ + + T
Sbjct: 517 IAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGKS-TSDCLLYVDYLIT----KSKMHTS 571
Query: 201 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTA 380
+ D ++AFD+V + +I +L +++ I++++SNR RV S P +
Sbjct: 572 LVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFN 631
Query: 381 GVPQGSALSPLLFSLYINDIPRSPETHLAL----FADDTAIYYSCRKKALLHRRLQTAAT 548
G+PQGS +S +LF + N + H + +ADD + + K + L
Sbjct: 632 GIPQGSPISVILFLIAFNKLSNIISLHKEIKFNAYADDFFLIINFNKNTNTNFNLDNLFD 691
Query: 549 TMGQW 563
+ W
Sbjct: 692 DIENW 696
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 53.2 bits (122), Expect = 5e-07
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 4/128 (3%)
Frame = +3
Query: 270 NMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSPLLFSLYINDIPR 446
N P LV IR Y SNR E + RH VT GVPQGS L PLL++ + I R
Sbjct: 14 NFSDPAYLVRFIRSYSSNRVLP--CESSEGVFRHQVTGGVPQGSVLGPLLWNTMYDGILR 71
Query: 447 SP---ETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 617
P + + FADD A+ + + W +++ P K+ AVL
Sbjct: 72 LPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRAIEHWLSSMGLELAPEKTKAVLI 131
Query: 618 KRGRPPNT 641
+ T
Sbjct: 132 SSRKAVET 139
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 47.6 bits (108), Expect = 2e-05
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Frame = +3
Query: 9 LLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKP 188
LLP GK+ E ++ R+ + + QFGFR + CV R H+ +
Sbjct: 517 LLPVFGKVLEAIMVNRVREVLPEG---CRWQFGFR-QGRCVEDAWR---HVKSSVGASAA 569
Query: 189 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRSRP 365
F D AFD V + + +L ++G R + + + + S R R GT P
Sbjct: 570 QYVLGTFVDFKGAFDNVEWSAALSRLADLGC--REMGLWQSFFSGRRAVIRSSSGTVEVP 627
Query: 366 RHVTAGVPQGSALSPLLFSLYINDIPR--SPETHLALFADDTAIYYSCRKKALLHRRLQT 539
VT G PQGS P ++ + ++ + + P L+ +ADD + +A+L +
Sbjct: 628 --VTRGCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGAQ 685
Query: 540 AATTMGQWFRKWRIDINPTKSTAVLFK 620
+ + W + ++ +K+ +L K
Sbjct: 686 LMSIVETWGAEVGDCLSTSKTVIMLLK 712
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 40.3 bits (90), Expect = 0.003
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Frame = +3
Query: 213 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ 392
D++KAFD + H + L G P V +++ +G S GV Q
Sbjct: 482 DVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQ 541
Query: 393 GSALSPLLFSLYINDIPRS-PE----------THLALFADDTAIYYSCR 506
G LSP+LF+L ++ + R+ P T+ A FADD ++ R
Sbjct: 542 GDPLSPILFNLVMDRLLRTLPSEIGAKVGNAITNAAAFADDLVLFAETR 590
>AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p
protein.
Length = 555
Score = 29.1 bits (62), Expect = 8.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 506 EEGVASSTTSDRSYHHGTVVPEVAHRH*PYEKH 604
EEGV+ T S +HH + H H P+ H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-PA
protein.
Length = 555
Score = 29.1 bits (62), Expect = 8.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 506 EEGVASSTTSDRSYHHGTVVPEVAHRH*PYEKH 604
EEGV+ T S +HH + H H P+ H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,872,889
Number of Sequences: 53049
Number of extensions: 1055174
Number of successful extensions: 3833
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3759
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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