Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C16
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 97 2e-20
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 93 3e-19
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 62 7e-10
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 58 8e-09
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 58 8e-09
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 58 1e-08
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 55 8e-08
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 42 4e-04
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 38 0.007
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 0.47
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 0.82
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 30 1.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 5.8
U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.8
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 29 5.8
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 29 5.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 5.8
U41557-1|AAA83300.1| 418|Caenorhabditis elegans Hypothetical pr... 28 7.6
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 28 7.6
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 96.7 bits (230), Expect = 2e-20
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
Frame = +3
Query: 204 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 383
++ D +KAFD++ H+ L+ KL ++ L++ + ++LSNRSFR R+ T S + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 384 VPQGSALSPLLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMG 557
VPQG+ LSPLLF +Y+NDI +A FADDT +Y S K LQ+A +
Sbjct: 77 VPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYAS-TPKTESENNLQSALDAVV 135
Query: 558 QWFRKWRIDINPTKSTAVLFKRGR 629
W + ++ +N +K+ V + R
Sbjct: 136 DWTKGSKLTLNQSKTVHVTVGKRR 159
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 92.7 bits (220), Expect = 3e-19
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Frame = +3
Query: 3 LGLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRR 182
+ LL I KL E+ + KR+ + + + Q GF+ HS V ++T I+ GLN +
Sbjct: 408 ISLLSPIAKLLEKAILKRIKNSIESPA----HQHGFKPEHSTTTAVIQVTNDIIGGLNMK 463
Query: 183 KPIPTGALF--FDIAKAFDKVWHNGLIYKLYN-MGVPDRLVLIIRDYLSNRSFRYRVEGT 353
P P A+ D+ AFDKV L L G+ ++ L + +YL R R +
Sbjct: 464 NP-PERAIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNH 522
Query: 354 RSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRL 533
S+ + GVPQGS +SP LF+ Y+ D+P +T L +ADD +I +K ++
Sbjct: 523 WSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKV 582
Query: 534 QTAATTMGQWFRKWRIDINPTKSTAVLF 617
Q + ++ ++ + I+ KST +F
Sbjct: 583 QLHIDEIAKYLKERGMSISAEKSTVTVF 610
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 61.7 bits (143), Expect = 7e-10
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Frame = +3
Query: 222 KAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGS 398
KAFD+V H+ L+ KL++ G+ D+LS+R+F +V H +++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 399 ALSPLLFSLYINDIPRS--PETHLALFADDTAIY 494
P LF ++IN + S P + FADD +Y
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY 95
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 58.0 bits (134), Expect = 8e-09
Identities = 44/146 (30%), Positives = 66/146 (45%)
Frame = +3
Query: 9 LLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKP 188
LLP + K++ + L R+ S ++ EQ GFR S + +H L LL + R
Sbjct: 628 LLPVLYKVFTKCLLNRMRR--SLDEAQPVEQAGFRRSFSTIDHIHSLQR--LLEVGREYQ 683
Query: 189 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 368
IP +F D KAFD V H + L G + ++++ N + + R
Sbjct: 684 IPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAV 742
Query: 369 HVTAGVPQGSALSPLLFSLYINDIPR 446
VT GV QG +SP LFS + + R
Sbjct: 743 PVTKGVRQGDPISPNLFSACLEHVFR 768
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 58.0 bits (134), Expect = 8e-09
Identities = 44/146 (30%), Positives = 66/146 (45%)
Frame = +3
Query: 9 LLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKP 188
LLP + K++ + L R+ S ++ EQ GFR S + +H L LL + R
Sbjct: 367 LLPVLYKVFTKCLLNRMRR--SLDEAQPVEQAGFRRSFSTIDHIHSLQR--LLEVGREYQ 422
Query: 189 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 368
IP +F D KAFD V H + L G + ++++ N + + R
Sbjct: 423 IPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAV 481
Query: 369 HVTAGVPQGSALSPLLFSLYINDIPR 446
VT GV QG +SP LFS + + R
Sbjct: 482 PVTKGVRQGDPISPNLFSACLEHVFR 507
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 57.6 bits (133), Expect = 1e-08
Identities = 44/146 (30%), Positives = 66/146 (45%)
Frame = +3
Query: 9 LLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKP 188
LLP + K++ + L R+ S ++ EQ GFR S + +H L LL + R
Sbjct: 457 LLPVLYKVFTKCLLNRMRR--SLDEAQPVEQAGFRRSFSTIDHIHSLQR--LLEVGREYQ 512
Query: 189 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 368
IP +F D KAFD V H + L G + ++++ N + + R
Sbjct: 513 IPLTLVFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAV 571
Query: 369 HVTAGVPQGSALSPLLFSLYINDIPR 446
VT GV QG +SP LFS + + R
Sbjct: 572 PVTKGVRQGDPISPNLFSACLEHVFR 597
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 54.8 bits (126), Expect = 8e-08
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = +3
Query: 261 KLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSPLLFSLYIND 437
KL G+ +++L NR+F ++ S+ + +++GVPQGS PLLF L+IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 438 --IPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAV 611
I +P +++ FADD I+++ +Q + + W + + + PTKS A+
Sbjct: 899 LLIDLAPTINISCFADDVKIFHTD------PTIIQNSIDIIVSWSKLNELPLAPTKS-AL 951
Query: 612 LFKRGRPPNTTLSI 653
L R N + S+
Sbjct: 952 LALGTRNKNQSYSV 965
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +3
Query: 204 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTA 380
+ F ++ AFDKV H LI KL + V L R +S ++F +V +H
Sbjct: 890 IHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQI 949
Query: 381 GVPQGSALSPLLFSLYIN----DIPRSPETHLALFADDTAIY 494
G P+GS +F ++IN +IP + ++D IY
Sbjct: 950 GAPRGSESRQFMFLVFINSLLCEIPINISCSACAISEDLEIY 991
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +3
Query: 204 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 383
+F D KAFD V H + L G + + ++++ N + + R VT G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 384 VPQGSALSPLLFSLYINDIPR 446
V QG +SP LFS + + R
Sbjct: 99 VRQGDPISPNLFSACLEHVFR 119
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 32.3 bits (70), Expect = 0.47
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = +3
Query: 600 STAVLFKRGRPPNTTLSIPLPTRRVNNPPPPFXQSRCSTSPYRGPRRSNI*ASPRQ*DDI 779
ST + PP T P P R+ NP P + S SP P I A+P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPI-ATPSSVPPP 507
Query: 780 PPP 788
PPP
Sbjct: 508 PPP 510
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.5 bits (68), Expect = 0.82
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = +3
Query: 600 STAVLFKRGRPPNTTLSIPLPTRRVNNPPPPFXQSRCSTSPYRGPRRSNI*ASPRQ*DDI 779
ST + PP T P P R+ NP P + S SP P I A+P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPI-ATPSSVPPP 514
Query: 780 PPP 788
PPP
Sbjct: 515 PPP 517
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 439 ISLIYKLNSNGERAEPCGTPAVT*RGRER 353
ISL S GER +PCGTP G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 618 KRGRPPNTTLSIPLPTRRVNNPPPPFXQSRCSTSPYRG-PRRSNI*ASPRQ*DDIPPPHQ 794
+ G PP P P +PPPP S P RG P ++ P Q PPP
Sbjct: 268 RTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL--PPPQAGGSPPPAG 325
Query: 795 XGTRP 809
G+ P
Sbjct: 326 TGSPP 330
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 618 KRGRPPNTTLSIPLPTRRVNNPPPPFXQSRCSTSPYRG-PRRSNI*ASPRQ*DDIPPPHQ 794
+ G PP P P +PPPP S P RG P ++ P Q PPP
Sbjct: 289 RTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL--PPPQAGGSPPPAG 346
Query: 795 XGTRP 809
G+ P
Sbjct: 347 TGSPP 351
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 618 KRGRPPNTTLSIPLPTRRVNNPPPPFXQSRCSTSPYRG-PRRSNI*ASPRQ*DDIPPPHQ 794
+ G PP P P +PPPP S P RG P ++ P Q PPP
Sbjct: 274 RTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL--PPPQAGGSPPPAG 331
Query: 795 XGTRP 809
G+ P
Sbjct: 332 TGSPP 336
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/70 (30%), Positives = 26/70 (37%)
Frame = +3
Query: 630 PPNTTLSIPLPTRRVNNPPPPFXQSRCSTSPYRGPRRSNI*ASPRQ*DDIPPPHQXGTRP 809
PP S+ LP N PPPP S +P P + +P + PPP G P
Sbjct: 472 PPGPPSSL-LPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAP 530
Query: 810 XRLXXXTXFP 839
T P
Sbjct: 531 LSTGAPTPPP 540
>U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical
protein R07G3.6 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 364 PVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGR 510
P T+ + +P + +S +P LRR +S P PP+TT R
Sbjct: 131 PTTTTTPAPTTTTTPNFLEKSLSMFFPSLRRKP-QSIPTLPPTTTPTPR 178
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 630 PPNTTLSIPLPTRRVNNPPPPFXQSRCSTSPYRGP 734
PP+ + IP+P R PP P SR P R P
Sbjct: 106 PPSRSGMIPVPPSRSGGPPAPMPVSRAG-GPPRAP 139
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 525 RRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRP-PNTTLSIPLPTRRVNNPPPPFXQ 701
R+ Q AT +RK +PT L P P T I P ++V +P PP +
Sbjct: 580 RKSQVTATQSPVSYRKIP-PTSPTPQRRPLNNTEVPSPVTYRKISAPVQKVTSPAPPAAR 638
Query: 702 SRCSTSPYRGPRRSNI 749
S + P RRS +
Sbjct: 639 SVSTDQPPPANRRSQV 654
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 7/67 (10%)
Frame = +3
Query: 630 PPNTTL-SIPL------PTRRVNNPPPPFXQSRCSTSPYRGPRRSNI*ASPRQ*DDIPPP 788
PPN T+ S P P + PPP Q + P S+I ++P Q PP
Sbjct: 231 PPNATIPSFPTSNAASPPVQEFAPPPPQQQQQQFQAPPPPMASHSSISSTPVQQQGFAPP 290
Query: 789 HQXGTRP 809
Q G P
Sbjct: 291 QQFGGPP 297
>U41557-1|AAA83300.1| 418|Caenorhabditis elegans Hypothetical
protein C50F7.6 protein.
Length = 418
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 262 NCITW-ECQTDSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYYSVCISTI 438
+C W D+ S+Y T + RS + + V P TS + ++ PSPR +
Sbjct: 44 SCSGWPNGAADTSSAYNTGGESCRSVSVTPDGVFIPTTSNSQMIQSQPSPRVLRRTVKMA 103
Query: 439 YPGLRR 456
P ++R
Sbjct: 104 SPAVQR 109
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/59 (27%), Positives = 22/59 (37%)
Frame = +3
Query: 618 KRGRPPNTTLSIPLPTRRVNNPPPPFXQSRCSTSPYRGPRRSNI*ASPRQ*DDIPPPHQ 794
K +PP + +PLP RR + PP P P S +PPP +
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPPISTADLCTPAFQQLPPPRE 291
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,610,656
Number of Sequences: 27780
Number of extensions: 505771
Number of successful extensions: 1721
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1698
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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