Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C13
(841 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.0
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.0
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.0
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.0
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 22 7.0
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 7.0
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 21 9.2
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 9.2
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 9.2
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 21 9.2
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 31 LPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 165
+PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 182 MPGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 31 LPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 165
+PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 182 MPGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 31 LPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 165
+PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 182 MPGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 31 LPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 165
+PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 182 MPGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 31 LPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 165
+PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 182 MPGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 358 RHLKDASPVLDHAICKSYPDSSKLTTSDARP 266
RH+K A PV+ + C S++L P
Sbjct: 68 RHIKGAIPVVSLSTCSMLCGSTQLWPQPTGP 98
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 737 FGSCTRPNGRWVRNYHP 787
FG PNG ++R Y P
Sbjct: 431 FGRKADPNGDYIRKYLP 447
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 42 ILPVVICLSQRLSHACLS 95
I P VI R+SH C+S
Sbjct: 71 IRPCVISRQLRVSHGCVS 88
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 769 GAKLPSAGLC 798
G ++PSAGLC
Sbjct: 103 GCEMPSAGLC 112
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 769 GAKLPSAGLC 798
G ++PSAGLC
Sbjct: 51 GCEMPSAGLC 60
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 769 GAKLPSAGLC 798
G ++PSAGLC
Sbjct: 234 GCEMPSAGLC 243
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,362
Number of Sequences: 336
Number of extensions: 4092
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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