BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_FL5_C12 (916 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_05_0227 - 23449579-23450459,23450574-23450691 31 1.7 11_04_0329 - 16442298-16443734 30 2.9 08_01_0434 + 3809681-3810016,3810039-3811100 30 2.9 >05_05_0227 - 23449579-23450459,23450574-23450691 Length = 332 Score = 30.7 bits (66), Expect = 1.7 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +2 Query: 251 GGGRCAXPSFFPTSEDAAPVLGXCTLGVVRQYGPCTGLPCCPPAPXPRK 397 GGGR + P+ ++ PVLG + G C+ L PP P PR+ Sbjct: 235 GGGRPSAPARREGTDPCRPVLGGAPFVIC---GKCSELLRTPPPPRPRR 280 >11_04_0329 - 16442298-16443734 Length = 478 Score = 29.9 bits (64), Expect = 2.9 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +2 Query: 248 HGGGRCAXPSFFPTSEDAAPVLGXCTLGVVRQYGPCTG 361 HG G A +F D P G +GV+ YG CTG Sbjct: 308 HGHGEVALATFHRMRRDGVPPNGATLVGVLSAYG-CTG 344 >08_01_0434 + 3809681-3810016,3810039-3811100 Length = 465 Score = 29.9 bits (64), Expect = 2.9 Identities = 15/40 (37%), Positives = 17/40 (42%) Frame = +2 Query: 296 DAAPVLGXCTLGVVRQYGPCTGLPCCPPAPXPRKNAGXAA 415 D AP R+ GPC LPC PA P + G A Sbjct: 26 DVAPSTSRREGAAKRKKGPCRRLPCSLPALPPASSGGGEA 65 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,360,699 Number of Sequences: 37544 Number of extensions: 335507 Number of successful extensions: 847 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 819 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 845 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2600672280 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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