Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C10
(874 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC021978-1|AAH21978.1| 472|Homo sapiens FBXO46 protein protein. 34 0.58
AF245472-1|AAK20937.1| 850|Homo sapiens Mlx interactor gamma pr... 31 4.1
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 31 4.1
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 31 4.1
X57527-1|CAA40748.1| 744|Homo sapiens alpha 1(VIII) collagen pr... 31 5.5
AK128339-1|BAC87391.1| 276|Homo sapiens protein ( Homo sapiens ... 31 5.5
DQ005958-1|AAY27747.1| 620|Homo sapiens membralin protein protein. 30 9.5
BC072384-1|AAH72384.1| 789|Homo sapiens phospholipase C, delta ... 30 9.5
BC008957-1|AAH08957.1| 408|Homo sapiens chromosome 19 open read... 30 9.5
AK074240-1|BAB85029.1| 789|Homo sapiens protein ( Homo sapiens ... 30 9.5
AJ289417-1|CAB93299.1| 112|Homo sapiens immunoglobulin heavy ch... 30 9.5
AE006466-2|AAK61267.1| 639|Homo sapiens unknown protein. 30 9.5
AC004528-3|AAC12681.1| 529|Homo sapiens R32184_3 protein. 30 9.5
AB075844-1|BAB85550.1| 757|Homo sapiens KIAA1964 protein protein. 30 9.5
>BC021978-1|AAH21978.1| 472|Homo sapiens FBXO46 protein protein.
Length = 472
Score = 34.3 bits (75), Expect = 0.58
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +1
Query: 571 GAGGVPQLARPGVPARRDRGRGMVPCALWNSMAPERLWLLNPRRLLARQLDEAKLAD 741
G GG P A PG P R + + C L+ ++P R L + L + DEA D
Sbjct: 107 GGGGRPGCAYPGSPGPGARAKDKITCDLYQLISPSRDALPSNVEFLLARADEASEGD 163
>AF245472-1|AAK20937.1| 850|Homo sapiens Mlx interactor gamma
protein.
Length = 850
Score = 31.5 bits (68), Expect = 4.1
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = -2
Query: 750 REQVGELGFVQLPGEQPARVQEPEPLGRHRVPQRARNHTATPISASRNTR------SCQL 589
R G+L + PG RV P+P+ P +N T ISA + R L
Sbjct: 611 RRLSGDLSSMPGPGTLSVRVSPPQPILSRGRPDSNKNRRITHISAEQKRRFNIKLGFDTL 670
Query: 588 RDTTGTLVFQNSLRVSEA 535
TL Q SL+VS+A
Sbjct: 671 HGLVSTLSAQPSLKVSKA 688
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 31.5 bits (68), Expect = 4.1
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = -2
Query: 870 PGLXGAPPGSXXNXI----QPVPXGADXVHEGFLXHVXGIVVVLREQVGELGFVQLPGEQ 703
PG G+PP + I P G +GFL G V + GEL F++LP +
Sbjct: 1530 PGALGSPPPAAAPTIFIGSPTTPAGLSTSADGFLKPPAGSVPG-PDSPGEL-FLKLPPQV 1587
Query: 702 PARVQEPEPLG-RHRVPQRARNHTATP 625
PA+ +P G P R TA P
Sbjct: 1588 PAQAPSQDPFGLAPAYPLEPRFPTAPP 1614
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 31.5 bits (68), Expect = 4.1
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = -2
Query: 870 PGLXGAPPGSXXNXI----QPVPXGADXVHEGFLXHVXGIVVVLREQVGELGFVQLPGEQ 703
PG G+PP + I P G +GFL G V + GEL F++LP +
Sbjct: 1835 PGALGSPPPAAAPTIFIGSPTTPAGLSTSADGFLKPPAGSVPG-PDSPGEL-FLKLPPQV 1892
Query: 702 PARVQEPEPLG-RHRVPQRARNHTATP 625
PA+ +P G P R TA P
Sbjct: 1893 PAQAPSQDPFGLAPAYPLEPRFPTAPP 1919
>X57527-1|CAA40748.1| 744|Homo sapiens alpha 1(VIII) collagen
protein.
Length = 744
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 571 GAGGVPQLARPGVPA-RRDRGRGMVPCAL 654
GA G+P + +PG P + DRG G VP AL
Sbjct: 343 GAPGLPGIGKPGFPGPKGDRGMGGVPGAL 371
>AK128339-1|BAC87391.1| 276|Homo sapiens protein ( Homo sapiens
cDNA FLJ46481 fis, clone THYMU3025772. ).
Length = 276
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 601 PGVPARRDRGRGMVPC-ALWNSMAPERLWLLNPRRLLA 711
PG+PA+R + +G +PC AL P LL+P R+LA
Sbjct: 215 PGLPAQRLQEKGGMPCPALQVDNVPAPSELLSPARILA 252
>DQ005958-1|AAY27747.1| 620|Homo sapiens membralin protein protein.
Length = 620
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 552 LRVSEARKQTISMSISARLIRPTRDWCSCDR 460
LR+S+A +Q +S+ + + PTRD C DR
Sbjct: 220 LRLSQATRQRLSIPVMVVTLDPTRDQCFGDR 250
>BC072384-1|AAH72384.1| 789|Homo sapiens phospholipase C, delta 3
protein.
Length = 789
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 584 SRNWH-DLVFRLAEIGVAVWFRAR 652
SR WH + ++RL E G++VWF+ R
Sbjct: 76 SRTWHKERLYRLQEDGLSVWFQRR 99
>BC008957-1|AAH08957.1| 408|Homo sapiens chromosome 19 open reading
frame 6 protein.
Length = 408
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 552 LRVSEARKQTISMSISARLIRPTRDWCSCDR 460
LR+S+A +Q +S+ + + PTRD C DR
Sbjct: 220 LRLSQATRQRLSIPVMVVTLDPTRDQCFGDR 250
>AK074240-1|BAB85029.1| 789|Homo sapiens protein ( Homo sapiens
cDNA FLJ23660 fis, clone HEP00931. ).
Length = 789
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 584 SRNWH-DLVFRLAEIGVAVWFRAR 652
SR WH + ++RL E G++VWF+ R
Sbjct: 76 SRTWHKERLYRLQEDGLSVWFQRR 99
>AJ289417-1|CAB93299.1| 112|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 112
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 445 VHRSVSVQQIRLNSLFSDKRILGFISVG*GSGTGRYYGAYFG 320
V RS+S ++LNSL + + + + GSG +YY Y+G
Sbjct: 63 VDRSISTAYLQLNSLKASDTAMYYCARQGGSGWSKYYFDYWG 104
>AE006466-2|AAK61267.1| 639|Homo sapiens unknown protein.
Length = 639
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -2
Query: 753 LREQVGELGFVQLPGEQPARVQEPEPLGRHRVPQRARNHTATPISAS 613
+ + +G L +VQ PGE+ R Q+ +PL R P +H ATP S S
Sbjct: 468 VEQSLGNLEYVQEPGEKHRR-QDQQPL--CRPPGVHGHHAATPRSCS 511
>AC004528-3|AAC12681.1| 529|Homo sapiens R32184_3 protein.
Length = 529
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 552 LRVSEARKQTISMSISARLIRPTRDWCSCDR 460
LR+S+A +Q +S+ + + PTRD C DR
Sbjct: 220 LRLSQATRQRLSIPVMVVTLDPTRDQCFGDR 250
>AB075844-1|BAB85550.1| 757|Homo sapiens KIAA1964 protein protein.
Length = 757
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 584 SRNWH-DLVFRLAEIGVAVWFRAR 652
SR WH + ++RL E G++VWF+ R
Sbjct: 44 SRTWHKERLYRLQEDGLSVWFQRR 67
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,709,708
Number of Sequences: 237096
Number of extensions: 2537802
Number of successful extensions: 11226
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11217
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -