Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C02
(847 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 56 2e-09
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 52 3e-08
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 49 2e-07
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 49 2e-07
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 48 3e-07
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 48 3e-07
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 48 3e-07
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 48 3e-07
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 47 8e-07
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 46 1e-06
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 44 6e-06
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 43 1e-05
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 5.1
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 8.8
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 55.6 bits (128), Expect = 2e-09
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Frame = +1
Query: 334 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDM 501
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGEVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 502 QTCTFKFGSRMHNSDEMDFVI--DKRIYSM---FESGAWDVTALSSAVQSQDRGEVEXRV 666
QTC KFGS N D++ + +K + ++SG WD+ + + + + E +
Sbjct: 163 QTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIIEVPAYLNVYEGNPTETDI 222
Query: 667 AMF 675
+
Sbjct: 223 TFY 225
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 51.6 bits (118), Expect = 3e-08
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +1
Query: 325 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWP 492
V S+ +WRPD+VL N A G Y + +A V NNG V W + S+ ++ +P
Sbjct: 104 VPSDHIWRPDIVLYNNAD---GHYEVTLMTKATVYNNGMVIWQPPAVYKSSCSIDVEYFP 160
Query: 493 NDMQTCTFKFGSRMHNSDEMD 555
D+QTC K GS ++ ++D
Sbjct: 161 YDVQTCVLKLGSWTYDGFKVD 181
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 48.8 bits (111), Expect = 2e-07
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 325 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 501
V S+ +WRPD+VL N A A +A + + G V W + + ++ +P D
Sbjct: 104 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDE 163
Query: 502 QTCTFKFGSRMHNSDEMD 555
QTC KFGS ++ ++D
Sbjct: 164 QTCVLKFGSWTYDGFKVD 181
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 48.8 bits (111), Expect = 2e-07
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 325 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 501
V S+ +WRPD+VL N A A +A ++ G V W + + ++ +P D
Sbjct: 100 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDE 159
Query: 502 QTCTFKFGSRMHNSDEMD 555
QTC KFGS ++ ++D
Sbjct: 160 QTCVMKFGSWTYDGFQVD 177
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 48.4 bits (110), Expect = 3e-07
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Frame = +1
Query: 325 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 501
+ RLW+PDV++ N+A G Y V NNGS ++ + + + +P D
Sbjct: 83 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDD 142
Query: 502 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDV 609
Q C KFGS ++ ++D + I S +G W++
Sbjct: 143 QRCEMKFGSWTYDGFQLDLQLQDESGGDISSFITNGEWEL 182
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 48.4 bits (110), Expect = 3e-07
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 325 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 501
++ +LW+PDV++ N+A G Y V NNGS ++ + + + +P D
Sbjct: 100 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 502 QTCTFKFGSRMHNSDEMDFVID 567
Q C KFGS ++ +++D +++
Sbjct: 160 QHCEMKFGSWTYDGNQLDLILN 181
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 48.4 bits (110), Expect = 3e-07
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 325 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 501
++ +LW+PDV++ N+A G Y V NNGS ++ + + + +P D
Sbjct: 100 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 502 QTCTFKFGSRMHNSDEMDFVID 567
Q C KFGS ++ +++D +++
Sbjct: 160 QHCEMKFGSWTYDGNQLDLILN 181
Score = 26.2 bits (55), Expect = 1.3
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Frame = +3
Query: 123 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 287
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 288 WNAGXVG 308
WN G
Sbjct: 87 WNDSEYG 93
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 48.4 bits (110), Expect = 3e-07
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Frame = +1
Query: 325 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 501
+ R+W+PDV++ N+A G Y V NNGS ++ + + + +P D
Sbjct: 115 IPPHRIWKPDVLMYNSADEGFDGTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDD 174
Query: 502 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDV 609
Q C KFGS ++ ++D + + S +G WD+
Sbjct: 175 QRCEMKFGSWTYDGFQLDLQLQDEAGGDVSSFVTNGEWDL 214
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 46.8 bits (106), Expect = 8e-07
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +1
Query: 301 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTP 465
E+G T L V SE +W PD+VL N A G+Y + +A + G V W +
Sbjct: 103 EYGGVTELYVPSEHIWLPDIVLYNNAD---GEYVVTTLTKAILHYTGKVIWTPPAIFKSS 159
Query: 466 ISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 555
+ + +P D QTC KFGS ++ +++D
Sbjct: 160 CEIDVRYFPFDQQTCFMKFGSWTYDGNQID 189
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 46.4 bits (105), Expect = 1e-06
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +1
Query: 307 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 474
G V SE++W PD+VL N G+Y + +A + G V W + M
Sbjct: 100 GVEMLYVPSEQIWLPDIVLYN---NWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEM 156
Query: 475 QLDNWPNDMQTCTFKFGSRMHNSDEMD 555
++ +P D QTC KFGS +N +++
Sbjct: 157 NVEYFPYDEQTCLMKFGSWTYNGAQVE 183
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 44.0 bits (99), Expect = 6e-06
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +1
Query: 340 LWRPDVVLLN-AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 513
+WRPDVVL N A + Y V + G V W+ + + + WP D Q C
Sbjct: 118 VWRPDVVLYNNAGGSDQHHYGDTNVLVYSEGKVLWVPPTEYHAFCELNMRLWPFDYQKCI 177
Query: 514 FKFGSRMHNSDEMDFVI--DKRIYSMFESGAWDVTALS 621
K GS + ++ I + +I ++ + W + +S
Sbjct: 178 VKIGSWTFDGYMLNLTIGSEPQIETLVSNSEWKIAKIS 215
Score = 33.1 bits (72), Expect = 0.011
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 135 LLATYD---RDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGXV 305
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 306 G 308
G
Sbjct: 106 G 106
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 43.2 bits (97), Expect = 1e-05
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +1
Query: 307 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 474
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 94 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 150
Query: 475 QLDNWPNDMQTCTFKFGSRMHNSDEMD 555
++ +P D QTC KFGS ++ +D
Sbjct: 151 DVEYFPFDEQTCFMKFGSWTYDGYMVD 177
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 24.2 bits (50), Expect = 5.1
Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Frame = -1
Query: 766 PXRPG--AGXPXPNXAPAASGXXRGXVSGNTXGTLPREXPPRHG--PGSAPHWTEPS 608
P RP G P P +P S G SG PR P G PG P P+
Sbjct: 265 PIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGP--PRPPMPMQGGAPGGPPQGMRPN 319
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.4 bits (48), Expect = 8.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 676 GTLPREXPPRHGPGSAPHWT 617
GT+PR+ P R G WT
Sbjct: 272 GTMPRQPPRRQGRRPVYWWT 291
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,594
Number of Sequences: 2352
Number of extensions: 17161
Number of successful extensions: 76
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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