Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_C01
         (841 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    26   1.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   3.8  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   6.6  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 564 TLWK-SNLTVVPSRTK*NGPENIWRNLSLVDSVFAQDEMV 680
           ++WK   L ++P   K  G  + +R L LVD++    EMV
Sbjct: 508 SMWKIQKLVLIPKPGKPPGHPSAFRPLGLVDNLAKVQEMV 547


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = +2

Query: 320 GLRALLTVWAEHMSEDCRRRFYK 388
           G+R   ++WAE +  +CR+++ +
Sbjct: 770 GIRYASSIWAESLKFECRKQWLR 792


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 678 PFHLGQTQNRPGIGFSRCSLA 616
           P  + QT+  PG  F RC LA
Sbjct: 490 PTRVPQTRTSPGKVFERCELA 510


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 907,901
Number of Sequences: 2352
Number of extensions: 19882
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)