Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C01
(841 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 389 e-108
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 389 e-108
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 389 e-108
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 376 e-104
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 376 e-104
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 226 3e-59
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 206 3e-53
AY071423-1|AAL49045.1| 330|Drosophila melanogaster RE50471p pro... 29 7.9
AY069272-1|AAL39417.1| 331|Drosophila melanogaster GM09977p pro... 29 7.9
AE014296-1353|AAF50499.1| 331|Drosophila melanogaster CG8209-PA... 29 7.9
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 389 bits (957), Expect = e-108
Identities = 181/271 (66%), Positives = 208/271 (76%)
Frame = +2
Query: 29 VAQKNFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
++ + F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 12 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 71
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 72 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 131
Query: 389 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 568
NWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 132 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 191
Query: 569 MEIQLNGGTIEDKVKWAREHLEKPIPGRFCVCPR*NG*LHWCHQGQRIQRCHFSLAHKEA 748
MEIQLNGG+IEDKVKWAREHLEKPI +G+ + K+
Sbjct: 192 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 251
Query: 749 TRKTHKGLXKVACIGAWHPSRVSXTVXRAGQ 841
RKTHKGL KVACIGAWHPSRVS TV RAGQ
Sbjct: 252 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 282
Score = 45.6 bits (103), Expect = 9e-05
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 648 VDSVFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
V +VF QDEM+DC+ SRWHTKKLP + + L K+ +
Sbjct: 218 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 265
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 389 bits (957), Expect = e-108
Identities = 181/271 (66%), Positives = 208/271 (76%)
Frame = +2
Query: 29 VAQKNFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
++ + F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 389 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 568
NWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 569 MEIQLNGGTIEDKVKWAREHLEKPIPGRFCVCPR*NG*LHWCHQGQRIQRCHFSLAHKEA 748
MEIQLNGG+IEDKVKWAREHLEKPI +G+ + K+
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240
Query: 749 TRKTHKGLXKVACIGAWHPSRVSXTVXRAGQ 841
RKTHKGL KVACIGAWHPSRVS TV RAGQ
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 271
Score = 45.6 bits (103), Expect = 9e-05
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 648 VDSVFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
V +VF QDEM+DC+ SRWHTKKLP + + L K+ +
Sbjct: 207 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 389 bits (957), Expect = e-108
Identities = 181/271 (66%), Positives = 208/271 (76%)
Frame = +2
Query: 29 VAQKNFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
++ + F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 389 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 568
NWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 569 MEIQLNGGTIEDKVKWAREHLEKPIPGRFCVCPR*NG*LHWCHQGQRIQRCHFSLAHKEA 748
MEIQLNGG+IEDKVKWAREHLEKPI +G+ + K+
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240
Query: 749 TRKTHKGLXKVACIGAWHPSRVSXTVXRAGQ 841
RKTHKGL KVACIGAWHPSRVS TV RAGQ
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 271
Score = 45.6 bits (103), Expect = 9e-05
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 648 VDSVFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
V +VF QDEM+DC+ SRWHTKKLP + + L K+ +
Sbjct: 207 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 376 bits (925), Expect = e-104
Identities = 176/258 (68%), Positives = 200/258 (77%)
Frame = +2
Query: 68 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 247
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 248 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 427
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 428 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 607
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 608 VKWAREHLEKPIPGRFCVCPR*NG*LHWCHQGQRIQRCHFSLAHKEATRKTHKGLXKVAC 787
VKWAREHLEKPI +G+ + K+ RKTHKGL KVAC
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 240
Query: 788 IGAWHPSRVSXTVXRAGQ 841
IGAWHPSRVS TV RAGQ
Sbjct: 241 IGAWHPSRVSTTVARAGQ 258
Score = 45.6 bits (103), Expect = 9e-05
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 648 VDSVFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
V +VF QDEM+DC+ SRWHTKKLP + + L K+ +
Sbjct: 194 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 241
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 376 bits (925), Expect = e-104
Identities = 176/258 (68%), Positives = 200/258 (77%)
Frame = +2
Query: 68 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 247
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 248 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 427
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 428 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 607
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 608 VKWAREHLEKPIPGRFCVCPR*NG*LHWCHQGQRIQRCHFSLAHKEATRKTHKGLXKVAC 787
VKWAREHLEKPI +G+ + K+ RKTHKGL KVAC
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 240
Query: 788 IGAWHPSRVSXTVXRAGQ 841
IGAWHPSRVS TV RAGQ
Sbjct: 241 IGAWHPSRVSTTVARAGQ 258
Score = 45.6 bits (103), Expect = 9e-05
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 648 VDSVFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
V +VF QDEM+DC+ SRWHTKKLP + + L K+ +
Sbjct: 194 VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 241
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 226 bits (553), Expect = 3e-59
Identities = 97/123 (78%), Positives = 109/123 (88%)
Frame = +2
Query: 29 VAQKNFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
++ + F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 389 NWY 397
NWY
Sbjct: 121 NWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 206 bits (503), Expect = 3e-53
Identities = 90/108 (83%), Positives = 99/108 (91%)
Frame = +2
Query: 68 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 247
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 248 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 391
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
>AY071423-1|AAL49045.1| 330|Drosophila melanogaster RE50471p
protein.
Length = 330
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 524 TQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPGR 652
T M + R++ + +E+ N G +E ++W H++ PIP R
Sbjct: 6 TLMDMGFPRERVEYALEVTSNKG-VEPAMEWLLAHVDDPIPSR 47
>AY069272-1|AAL39417.1| 331|Drosophila melanogaster GM09977p
protein.
Length = 331
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 524 TQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPGR 652
T M + R++ + +E+ N G +E ++W H++ PIP R
Sbjct: 6 TLMDMGFPRERVEYALEVTSNKG-VEPAMEWLLAHVDDPIPSR 47
>AE014296-1353|AAF50499.1| 331|Drosophila melanogaster CG8209-PA
protein.
Length = 331
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 524 TQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPGR 652
T M + R++ + +E+ N G +E ++W H++ PIP R
Sbjct: 6 TLMDMGFPRERVEYALEVTSNKG-VEPAMEWLLAHVDDPIPSR 47
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,324,906
Number of Sequences: 53049
Number of extensions: 869841
Number of successful extensions: 2151
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2151
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -