Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C01
(841 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 349 1e-96
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 349 1e-96
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 349 1e-96
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 349 1e-96
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 248 5e-66
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 248 5e-66
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 154 9e-38
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 154 9e-38
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.8
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 5.4
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 28 7.2
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 349 bits (859), Expect = 1e-96
Identities = 162/271 (59%), Positives = 196/271 (72%)
Frame = +2
Query: 29 VAQKNFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
++ + F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 389 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 568
NW WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH+
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 569 MEIQLNGGTIEDKVKWAREHLEKPIPGRFCVCPR*NG*LHWCHQGQRIQRCHFSLAHKEA 748
+EIQ+NGGTIE KV WAREHLEK + +G + K+
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 749 TRKTHKGLXKVACIGAWHPSRVSXTVXRAGQ 841
RKTHKGL KVACIGAWHPSRV+ TV RAGQ
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 648 VDSVFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
VD+VFAQDEM+D I SRWHTKKLP + + L K+ +
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 349 bits (859), Expect = 1e-96
Identities = 162/271 (59%), Positives = 196/271 (72%)
Frame = +2
Query: 29 VAQKNFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
++ + F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 389 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 568
NW WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH+
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 569 MEIQLNGGTIEDKVKWAREHLEKPIPGRFCVCPR*NG*LHWCHQGQRIQRCHFSLAHKEA 748
+EIQ+NGGTIE KV WAREHLEK + +G + K+
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 749 TRKTHKGLXKVACIGAWHPSRVSXTVXRAGQ 841
RKTHKGL KVACIGAWHPSRV+ TV RAGQ
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 648 VDSVFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
VD+VFAQDEM+D I SRWHTKKLP + + L K+ +
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 349 bits (859), Expect = 1e-96
Identities = 162/271 (59%), Positives = 196/271 (72%)
Frame = +2
Query: 29 VAQKNFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
++ + F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 389 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 568
NW WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH+
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 569 MEIQLNGGTIEDKVKWAREHLEKPIPGRFCVCPR*NG*LHWCHQGQRIQRCHFSLAHKEA 748
+EIQ+NGGTIE KV WAREHLEK + +G + K+
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 749 TRKTHKGLXKVACIGAWHPSRVSXTVXRAGQ 841
RKTHKGL KVACIGAWHPSRV+ TV RAGQ
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 648 VDSVFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
VD+VFAQDEM+D I SRWHTKKLP + + L K+ +
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 349 bits (859), Expect = 1e-96
Identities = 162/271 (59%), Positives = 196/271 (72%)
Frame = +2
Query: 29 VAQKNFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
++ + F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 389 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 568
NW WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH+
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 569 MEIQLNGGTIEDKVKWAREHLEKPIPGRFCVCPR*NG*LHWCHQGQRIQRCHFSLAHKEA 748
+EIQ+NGGTIE KV WAREHLEK + +G + K+
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 749 TRKTHKGLXKVACIGAWHPSRVSXTVXRAGQ 841
RKTHKGL KVACIGAWHPSRV+ TV RAGQ
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 648 VDSVFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
VD+VFAQDEM+D I SRWHTKKLP + + L K+ +
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 248 bits (606), Expect = 5e-66
Identities = 107/168 (63%), Positives = 130/168 (77%)
Frame = +2
Query: 29 VAQKNFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
++ + F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 389 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 532
NW WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 62.1 bits (144), Expect = 5e-10
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 740 KEATRKTHKGLXKVACIGAWHPSRVSXTVXRAGQ 841
K+ RKTHKGL KVACIGAWHPSRV+ TV RAGQ
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 223
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 657 VFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
V A +M+D I SRWHTKKLP + + L K+ +
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 206
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 248 bits (606), Expect = 5e-66
Identities = 107/168 (63%), Positives = 130/168 (77%)
Frame = +2
Query: 29 VAQKNFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 208
++ + F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 209 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 388
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 389 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 532
NW WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 62.1 bits (144), Expect = 5e-10
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 740 KEATRKTHKGLXKVACIGAWHPSRVSXTVXRAGQ 841
K+ RKTHKGL KVACIGAWHPSRV+ TV RAGQ
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 223
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 657 VFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
V A +M+D I SRWHTKKLP + + L K+ +
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 206
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 154 bits (373), Expect = 9e-38
Identities = 77/135 (57%), Positives = 92/135 (68%)
Frame = +2
Query: 437 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 616
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 617 AREHLEKPIPGRFCVCPR*NG*LHWCHQGQRIQRCHFSLAHKEATRKTHKGLXKVACIGA 796
AREHLEK + +G + K+ RKTHKGL KVACIGA
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGA 158
Query: 797 WHPSRVSXTVXRAGQ 841
WHPSRV+ TV RAGQ
Sbjct: 159 WHPSRVAFTVARAGQ 173
Score = 48.0 bits (109), Expect = 8e-06
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +2
Query: 29 VAQKNFQHPXHGSMGFYPKKRSRRHRGKVKAFPK 130
++ + F P HG MGF PKKRSR +RG++KAF K
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 648 VDSVFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
VD+VFAQDEM+D I SRWHTKKLP + + L K+ +
Sbjct: 109 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 156
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 154 bits (373), Expect = 9e-38
Identities = 77/135 (57%), Positives = 92/135 (68%)
Frame = +2
Query: 437 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 616
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 617 AREHLEKPIPGRFCVCPR*NG*LHWCHQGQRIQRCHFSLAHKEATRKTHKGLXKVACIGA 796
AREHLEK + +G + K+ RKTHKGL KVACIGA
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGA 158
Query: 797 WHPSRVSXTVXRAGQ 841
WHPSRV+ TV RAGQ
Sbjct: 159 WHPSRVAFTVARAGQ 173
Score = 48.0 bits (109), Expect = 8e-06
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +2
Query: 29 VAQKNFQHPXHGSMGFYPKKRSRRHRGKVKAFPK 130
++ + F P HG MGF PKKRSR +RG++KAF K
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 648 VDSVFAQDEMVDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLXKLPAL 791
VD+VFAQDEM+D I SRWHTKKLP + + L K+ +
Sbjct: 109 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 156
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 269 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 397
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 250 GCHHHRDSSDGLCRCCWIH*DPSWTTRSFDCLGGAYV*RLSTSLLQKLVQMQEEGF 417
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +3
Query: 552 KRRLTLWKSNLTVVPSRTK*NGPENIWRNLSL------VDSVFAQD-EMVDC 686
K RL L K +V S K GP+ W N+ L ++S+F D + +DC
Sbjct: 473 KNRLNLSKEEKELVSSYMKNQGPQKKWENMPLHETSIRINSLFYVDGKKIDC 524
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,995,745
Number of Sequences: 27780
Number of extensions: 436535
Number of successful extensions: 1077
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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