Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_B22
(861 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 70 3e-14
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 65 7e-13
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 64 2e-12
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 63 4e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 62 8e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 59 4e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 58 1e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 57 2e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 54 1e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 1e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 54 2e-09
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 51 2e-08
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 47 2e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 46 4e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 39 5e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 35 8e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.003
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.018
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.042
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.90
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 69.7 bits (163), Expect = 3e-14
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 9/176 (5%)
Frame = +3
Query: 99 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 257
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 258 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 431
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 432 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFXDXQKNI 599
+ G V W + + + +P D QTC KFGS ++ +D +N+
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQIDLKHINQNM 182
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 65.3 bits (152), Expect = 7e-13
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +3
Query: 123 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 290
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 291 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 461
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 462 KRLDISTPISMQLDNWPNDMQTCTFKFGS 548
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 63.7 bits (148), Expect = 2e-12
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Frame = +3
Query: 195 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 368
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 369 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 536
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 537 KFGSRMHNSD 566
KFGS N D
Sbjct: 168 KFGSWTFNGD 177
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 63.7 bits (148), Expect = 2e-12
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Frame = +3
Query: 117 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 275
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 276 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 449
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 450 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 62.9 bits (146), Expect = 4e-12
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Frame = +3
Query: 144 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 302
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 303 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 467
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151
Query: 468 LDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
+ + ++ +P D Q+C KFGS +N +D
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.7 bits (143), Expect = 8e-12
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 407
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 408 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
G Y V++NGS ++ + + + +P D Q C KFGS ++ + +D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.7 bits (143), Expect = 8e-12
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 407
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 408 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
G Y V++NGS ++ + + + +P D Q C KFGS ++ + +D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 61.7 bits (143), Expect = 8e-12
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Frame = +3
Query: 87 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 245
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 246 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 422
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 423 ----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
+A + + G V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 407
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 408 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
G Y V++NGS ++ + + + +P D Q C KFGS ++ + +D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.3 bits (142), Expect = 1e-11
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Frame = +3
Query: 144 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 308
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 309 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 482
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 483 PISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
+ ++ +P D QTC KFGS ++ +D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 407
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 408 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
G Y V+++GS ++ + M + +P D Q C KFGS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 407
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 408 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
G Y V+++GS ++ + M + +P D Q C KFGS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 59.3 bits (137), Expect = 4e-11
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 407
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 408 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
G Y V+++GS ++ + + + +P D Q C KFGS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 407
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 408 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
G Y V+++GS ++ + + + +P D Q C KFGS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 407
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 408 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
G Y V+++GS ++ + + + +P D Q C KFGS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Frame = +3
Query: 144 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 308
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 309 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 473
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 474 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
+ S+ ++ +P D+QTC K GS ++ +D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 57.6 bits (133), Expect = 1e-10
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Frame = +3
Query: 117 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 281
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 282 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 452
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 453 SWIKRLDISTPISMQLDN--WPNDMQTCTFKFGSRMHNSD 566
+ TP+ + D+ WP D+ CT S H S+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSN 185
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 57.2 bits (132), Expect = 2e-10
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 7/167 (4%)
Frame = +3
Query: 96 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 260
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 261 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARV 434
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 435 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
NNG+ ++ + + + +P D Q C KFGS ++ +D
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 56.8 bits (131), Expect = 2e-10
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Frame = +3
Query: 120 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 287
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 288 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 455
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 456 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 575
+ + + +WP D C FGS +H+ + ++
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVN 198
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 54.4 bits (125), Expect = 1e-09
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Frame = +3
Query: 132 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 296
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 297 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 467
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 468 LDISTPISMQLDNWPNDMQTCTFKFGS 548
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +3
Query: 198 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 374
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 375 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 53.6 bits (123), Expect = 2e-09
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 12/183 (6%)
Frame = +3
Query: 66 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 227
++LL FLL + + + ++D++L YD P D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 228 H-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 398
A I + + +Q + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 399 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDX 569
+ + R+ NGSV + R+ ++ M L +P D Q C+ + S +D
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDD 187
Query: 570 MDF 578
+ F
Sbjct: 188 LVF 190
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 50.8 bits (116), Expect = 2e-08
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 12/183 (6%)
Frame = +3
Query: 66 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 227
++LL FLL + + + ++D++L YD P D VV + + +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFVR 68
Query: 228 H-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 398
+ I + +Q + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 399 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDX 569
+ + R+ NGSV + R+ ++ M L +P D Q C+ + S +D
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDD 187
Query: 570 MDF 578
+ F
Sbjct: 188 LVF 190
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 47.2 bits (107), Expect = 2e-07
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Frame = +3
Query: 123 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 290
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 291 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 443
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 444 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.0 bits (104), Expect = 4e-07
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 123 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 290
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 291 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 443
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 444 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 237 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 416
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 417 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 39.1 bits (87), Expect = 5e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Frame = +3
Query: 60 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-L 218
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 219 HLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 389
L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 390 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 39.1 bits (87), Expect = 5e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Frame = +3
Query: 60 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-L 218
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 219 HLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 389
L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 390 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 39.1 bits (87), Expect = 5e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Frame = +3
Query: 60 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-L 218
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 219 HLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 389
L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 390 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 288 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 440
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 441 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 548
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 35.1 bits (77), Expect = 8e-04
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 407
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 408 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDF 578
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + + F
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.003
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +3
Query: 354 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 524
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 525 TCTFKFGSRMHNSDXMDF 578
C + S H +D M F
Sbjct: 176 ECKLQMESLSHTTDEMIF 193
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 32.7 bits (71), Expect = 0.004
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = +3
Query: 198 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 371
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 372 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 545
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 546 S 548
S
Sbjct: 257 S 257
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.018
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 360 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 530
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 531 TFKFGSRMHN 560
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.5 bits (63), Expect = 0.042
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +3
Query: 198 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 359
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 360 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 524
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 525 TC 530
C
Sbjct: 129 IC 130
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.90
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 63 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 167
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 341 PSAAAPLPCVPTQS 300
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,503
Number of Sequences: 438
Number of extensions: 4246
Number of successful extensions: 89
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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