Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_B21
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    61   1e-11
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    32   0.008
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                28   0.095
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.88 

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 60.9 bits (141), Expect = 1e-11
 Identities = 32/98 (32%), Positives = 50/98 (51%)
 Frame = +1

Query: 13  YAAPEVLARARSAAAPGYGPQCDAWSLGVVFYCMLCGRAPFQPTSRKEPITAYMDRIRAG 192
           Y +PEVL +        YG   D W+ GV+ Y +L G  PF    +         +I+ G
Sbjct: 78  YLSPEVLKKEP------YGKPVDIWACGVILYILLVGYPPFWDEDQHR----LYAQIKTG 127

Query: 193 NFTMEGPQWDKISSESKRIITGLLSVEPSHRMTIDELL 306
           ++    P+WD ++ E+K +I  +L+V PS R+T  E L
Sbjct: 128 SYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEAL 165


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 31.9 bits (69), Expect = 0.008
 Identities = 27/92 (29%), Positives = 43/92 (46%)
 Frame = +1

Query: 13  YAAPEVLARARSAAAPGYGPQCDAWSLGVVFYCMLCGRAPFQPTSRKEPITAYMDRIRAG 192
           Y APEV+         G+    D WSLGV+ + +L G  PF   +  +P+  Y + I  G
Sbjct: 531 YVAPEVILNK------GHDISADYWSLGVLMFELLTGTPPF---TGGDPMKTY-NIILKG 580

Query: 193 NFTMEGPQWDKISSESKRIITGLLSVEPSHRM 288
              +E P+   I+  +  +I  L    P+ R+
Sbjct: 581 IDAIEFPR--SITRNATALIKKLCRDNPAERL 610


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 28.3 bits (60), Expect = 0.095
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 13  YAAPEVLARARSAAAPGYGPQCDAWSLGVVFYCMLCGRAPF 135
           Y APEV+ + R        P  D +SLG+V + ML  + PF
Sbjct: 220 YTAPEVIKQNRPT------PAADIYSLGIVAWQMLFRKLPF 254


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 345 IIRHDQGGPVQTPEQEQTAQVQ 410
           IIR+ Q  P Q+P+   T+Q+Q
Sbjct: 576 IIRNSQQAPGQSPDWPSTSQIQ 597


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.133    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,264
Number of Sequences: 438
Number of extensions: 3212
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)