Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_B17
(894 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 74 2e-14
SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe... 34 0.024
SPBC1711.09c |||SNARE associated Golgi protein |Schizosaccharomy... 29 0.89
SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces p... 28 2.1
SPAC4F8.14c |hcs1|hcs|3-hydroxy-3-methylglutaryl-CoA synthase|Sc... 27 3.6
SPBC36.02c |||spermidine family transporter |Schizosaccharomyces... 27 3.6
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.6
SPBC215.11c |||aldo/keto reductase, unknown biological role|Schi... 27 4.8
SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase Cka1|Sch... 26 6.3
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 26 8.3
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 74.1 bits (174), Expect = 2e-14
Identities = 49/161 (30%), Positives = 78/161 (48%)
Frame = +3
Query: 180 YKQVFVXXXXXXXXXXXXISILSTHLLHSIAIIDQTYISRKAMAQAVAEQFFGCFITMQN 359
+K FV + I S +L+ +DQ Y S K + A+A Q+ G ++ +
Sbjct: 343 FKLCFVDETNFPIISTPSLVISSNSILYPKDSLDQIYDSTKTLTWALASQWIGVYLIPKA 402
Query: 360 WSDLWLAKGIPDYLCGLYSKKCFGNNAYRYWIHQELKEVMGYEEQYGGIVLDPWQPPASG 539
WSDLWL G+ Y+CGL+ KK GNN YR+ + +++ Y + LD +PP S
Sbjct: 403 WSDLWLIYGLSYYICGLFLKKLMGNNDYRFRLKKQV---------YRLLELDIGKPPISQ 453
Query: 540 TRIEPNVFYFPVRNVHTMSPRYIEVMRKKSHLVLRMLEQRI 662
I P+ P ++ + KS LV+ +LE+R+
Sbjct: 454 RNIN-----IPI------DPNTLDFIALKSPLVIHILERRL 483
>SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 882
Score = 34.3 bits (75), Expect = 0.024
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Frame = +3
Query: 243 LSTHLLHSIAIIDQ---TYISRKA--MAQAVAEQFFGCFITMQNWSDLWLAKGIPDYLCG 407
L T+ L +I + + T I R A + +A Q+FG +TMQ W LWL +G ++
Sbjct: 288 LVTYRLAAILVSEDSAATVIERVAEVVQHELAHQWFGNLVTMQFWDGLWLNEGFATWMSW 347
Query: 408 LYSKKCFGNNAYRYWIHQELKEVMGYEEQYGGIVLDPWQPPASGTRIEPNVFYFPVRNVH 587
C N+ Y W ++ E + + LD + S IE P+ + +
Sbjct: 348 F---SC--NHFYPEW---KVWESYVTDNLQSALSLDALR---SSHPIE-----VPIMHDY 391
Query: 588 TMSPRYIEVMRKKSHLVLRMLEQRIGQELLLQVFNKQLA 704
++ + + K V+RM+ + +G++ ++ K ++
Sbjct: 392 EINQIFDAISYSKGSCVIRMVSKYVGEDTFIKGIQKYIS 430
>SPBC1711.09c |||SNARE associated Golgi protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 270
Score = 29.1 bits (62), Expect = 0.89
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 369 LW-LAKGIPDYLCGLYSKKCFGNNAYRYWIHQELKEVM-GYEEQYGGIV 509
+W L G +CG++ + AYRY++ Q+ +E +EE YG V
Sbjct: 74 VWGLNVGFWTVVCGIFIGETIAFMAYRYFLEQKAQEFREHHEEHYGTFV 122
>SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 535
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = -1
Query: 672 ALVQYAAPTFVIPNEIFCA*LQYTAATWYEHCVRGNRRHWVQSWFH*RAAATGLGLY 502
+L+Q F+ ++ + A ++Y + H V GN+R W++ + A G+G+Y
Sbjct: 9 SLLQKTTSRFIKRSKTY-ADVRYNSQALQNHGVPGNKRKWMKRFVF--VGAAGIGVY 62
>SPAC4F8.14c |hcs1|hcs|3-hydroxy-3-methylglutaryl-CoA
synthase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 447
Score = 27.1 bits (57), Expect = 3.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 116 YLHEAFEFYEETLSTRYPY 172
Y+ A++FY+ L++ YPY
Sbjct: 186 YMQHAYDFYKPDLTSEYPY 204
>SPBC36.02c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -1
Query: 750 PXSPLPILYWPHWXPTPTAC*ILEAGALVQYAAPTFVIPNE 628
P SPL + WP T C + +A+ F +P E
Sbjct: 120 PKSPLIAVNWPFKRKLKTTCILAYVALCSSFASSVFAVPAE 160
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 657 RIGQELLLQVFNKQLALXTNAANTRSGVGYXG 752
R+ LLL V++ +LAL N N + +GY G
Sbjct: 2 RLISSLLLLVYSARLALSLNLTNQTAVLGYWG 33
>SPBC215.11c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 306
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 453 IHQELKEVMGYEEQYGGIVLDPWQPPASGTRIEP 554
++++ ++V+ Y EQ G I PW P ASG +P
Sbjct: 193 VNRKNEKVLEYCEQKG-IAFIPWYPLASGALAKP 225
>SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase
Cka1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 26.2 bits (55), Expect = 6.3
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 447 YWIHQELKEVMGYEEQY 497
YW ++ ++EV GY++ Y
Sbjct: 27 YWDYENMQEVFGYQDNY 43
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 509 DYTAVLFFVTHHLFQLLMYPI 447
DY A F+ HH+ QLL P+
Sbjct: 32 DYDAEYQFINHHMQQLLTRPV 52
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,774,190
Number of Sequences: 5004
Number of extensions: 81374
Number of successful extensions: 202
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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