Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_B16
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   1.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.9  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 300 SIWFRCQ*DRSTGVEKG*SNVEETVPG 220
           ++W  CQ   + GVE+G       +PG
Sbjct: 147 TVWSHCQCVLADGVERGILTANRMIPG 173


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 300 SIWFRCQ*DRSTGVEKG*SNVEETVPG 220
           ++W  CQ   + GVE+G       +PG
Sbjct: 147 TVWSHCQCVLADGVERGILTANRMIPG 173


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 51  AASAIPSLVNAFSSSKPPQTDNPSAR 128
           AA  +P + N  S   PP T+N  A+
Sbjct: 210 AAFMLPIIHNLLSDKNPPNTENNCAQ 235


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 325 RTSPPS*KATATRILSILRLSFFLPPLASK 414
           R+SP +  A A+  ++I  +S  +PP AS+
Sbjct: 250 RSSPTTATAIASATVTIQNVSNTIPPFASR 279


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 325 RTSPPS*KATATRILSILRLSFFLPPLASK 414
           R+SP +  A A+  ++I  +S  +PP AS+
Sbjct: 198 RSSPTTATAIASATVTIQNVSNTIPPFASR 227


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 325 RTSPPS*KATATRILSILRLSFFLPPLASK 414
           R+SP +  A A+  ++I  +S  +PP AS+
Sbjct: 381 RSSPTTATAIASATVTIQNVSNTIPPFASR 410


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 255 FQRLYFDLTGTETKSNS-VTVQSLPNVSSIIKGYRDAYLVNLEAVV 389
           F  L  +L G     N  VT+  LPNV+S +     A   NLE VV
Sbjct: 197 FVSLVRELRGAFKAENLLVTLTVLPNVNSTVYYDPRALSPNLEFVV 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,839
Number of Sequences: 336
Number of extensions: 3483
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)