Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_B16
(798 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 1.9
12_02_0046 + 12830974-12832386 29 3.2
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 29 3.2
03_05_0275 + 22628452-22628694,22630181-22630386,22631368-226316... 29 4.3
05_06_0026 - 25024807-25025300,25025432-25025495,25025567-250256... 29 5.7
04_01_0041 - 464695-464850,467485-469029 29 5.7
01_05_0227 - 19512866-19514983 29 5.7
12_02_1174 - 26696869-26698191 28 7.5
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081... 28 7.5
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 7.5
04_04_0712 + 27476319-27476569,27477150-27477402,27477535-274779... 28 7.5
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 7.5
02_05_0686 - 30900748-30902167,30903442-30904742 28 7.5
09_03_0145 - 12749288-12751510 28 9.9
09_01_0061 + 948663-948708,949638-949993 28 9.9
07_01_0310 + 2209084-2209554 28 9.9
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 28 9.9
01_06_1682 - 39130696-39131705,39132355-39132583 28 9.9
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 521 PLCIKPPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSIPLNP 655
PL PP P S + + P +P P PPP FPS NP
Sbjct: 94 PLLPTPPPPPASISPT-PAPPLPPPPAPAPPPTPTPKFPSSSANP 137
>12_02_0046 + 12830974-12832386
Length = 470
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +2
Query: 536 PPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSIPLNPVLKGISXPGVKXPXGXQ 706
PPS + A P Q+P I + PP L P +P P K I P P Q
Sbjct: 247 PPSLRTAPAAVAPPRQVPVITQQQAPP-LKRPAPPVPSPPCAKKIRGPVSASPAARQ 302
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 509 WRSRPLCIKPPSPGESRATSXPNHQIPRIPYXKPPP 616
W + P+ PP P RA S P P P +P P
Sbjct: 29 WLNSPIWSAPPPPARHRAPSPPRPPPPPPPPTQPAP 64
>03_05_0275 +
22628452-22628694,22630181-22630386,22631368-22631659,
22632707-22632814,22632972-22633222,22633316-22633357,
22634478-22634601,22634786-22634851,22635734-22635910
Length = 502
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 527 CIKPPSPGESRATSXPNHQIPRIPYXKPPP 616
C++PP P S A S + R+P PPP
Sbjct: 6 CLRPPLPHSSAAASASAARGLRVPLPPPPP 35
>05_06_0026 -
25024807-25025300,25025432-25025495,25025567-25025662,
25025719-25025929,25026616-25026690,25026820-25027037
Length = 385
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 521 PLCIKPPSPGESRATSXPNHQIPRIPYXKPPP 616
P+ +KPPSP + A P Q+P +P PPP
Sbjct: 5 PISVKPPSP-VAAAPPPPPVQVP-VPPPPPPP 34
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 246 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKIPV 422
+I R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V
Sbjct: 40 LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99
Query: 423 TVD 431
+D
Sbjct: 100 PLD 102
>01_05_0227 - 19512866-19514983
Length = 705
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 463 STVTSAVVQQRSTVTGILRLGAEGKTTASRL 371
S +T + +QQ + ++ LG GKTT ++L
Sbjct: 18 SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 536 PPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSIPLNPVLKGISXPGVKXP 694
PP P +R P H+ P + +PPP+L P P P + P VK P
Sbjct: 125 PPPPPRTRTRVEPPHRPPPVK-PQPPPSLPPPPPPPPPPPPPR---PPSVKPP 173
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 521 PLCIKPPSPGESRATSXPNHQIPRI-PYXKPPPNLXSNFPSIP 646
P ++PPSP T P+ + P + P +PPP L P P
Sbjct: 182 PPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPP 224
>11_08_0092 -
28307180-28307380,28307471-28307936,28308008-28308117,
28308206-28308493,28309024-28309059
Length = 366
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 512 RSRPLCIKPPSPGESRATSXPNH 580
R+ P ++PPSP S AT+ P H
Sbjct: 211 RAAPRDVQPPSPSSSPATTSPAH 233
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +2
Query: 536 PPSPGESRATSXPNHQIPRIPYXKPPPNLXSNF---PSIPLNP 655
PP P S +P +P PPP +N P +PL P
Sbjct: 210 PPLPASSEPVDPSAASLPPLPPPPPPPPKPANIAGAPGLPLPP 252
>04_04_0712 +
27476319-27476569,27477150-27477402,27477535-27477914,
27479738-27479864,27479945-27480110,27480221-27480359,
27481854-27481987,27482087-27482229,27482367-27482565,
27482688-27483010
Length = 704
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 521 PLCIKPPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSIP 646
PL + PP+ GE+ +++ P + + +PP L NFP P
Sbjct: 214 PLQLLPPADGEASSSNAAQSAPPPLLFDQPPYPLI-NFPGWP 254
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 237 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
Q I + ++ L N TV + N + GY+ +N+ + PSLK
Sbjct: 198 QVFCIVLEMFFYQLLQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLK- 256
Query: 417 PVTVDLCWTTADVTVEGVNVLATPSS 494
D C T ++ +EG++ L S+
Sbjct: 257 ----DFCEPTVEM-LEGMSALKALST 277
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +2
Query: 536 PPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSI---PLNPVLKGISXPGVKXPXGXQ 706
PP P + A + P P+ PPP P P P KG S P P G +
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK 374
Query: 707 KGP 715
GP
Sbjct: 375 GGP 377
>09_03_0145 - 12749288-12751510
Length = 740
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/51 (25%), Positives = 21/51 (41%)
Frame = +2
Query: 494 LSHYYWRSRPLCIKPPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSIP 646
LS ++ +P PP P P +P +P+ +PPP + P
Sbjct: 16 LSKPPFKPKPTNPSPPPPPPPPGIQPPPPALPGMPHGRPPPPFPGGRDAFP 66
>09_01_0061 + 948663-948708,949638-949993
Length = 133
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 30 LCLXSFLAASAIPSLVNAFSSSKPPQTDNPSAR 128
LC+ + PS N +SS KPP T P+ R
Sbjct: 91 LCVIHVSSKDHRPSQDNPYSSDKPPPTSPPAQR 123
>07_01_0310 + 2209084-2209554
Length = 156
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 521 PLCIKPPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSIPL 649
P + PP P + T P IP +P PP PS+P+
Sbjct: 110 PNAVLPPIPAVPKVTLPPMPSIPAVPKVTLPP-----MPSVPM 147
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +2
Query: 515 SRPLCIKPPSPGESRATSXPNHQIPRIP-YXKPPPNLXSNFPSIPLNPVLKGISXP 679
SRP PP P ++ P + P P PPP S+ P +P P G P
Sbjct: 413 SRPQSPPPPLPSDAFEQPPPPPEHPPPPESTSPPPPPTSDPPPVPPPPPTTGSFMP 468
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 566 SXPNHQIPRIPYXKPPPNLXSNFPSIPLN 652
S P+ Q P PY PPP+ +PS P N
Sbjct: 175 SKPHIQPPIFPYNSPPPS-PYQYPSPPFN 202
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 503 YYWRSRPLCIKPPSPGESRATSXPNHQIPRIPYXKPP-PNLXSNFP 637
YY+ S P + P S + HQ P PY PP P N P
Sbjct: 280 YYFNSPPPQYQHSPPANSYVSPPLAHQYPPPPYKSPPIPPYYFNSP 325
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,556,669
Number of Sequences: 37544
Number of extensions: 463722
Number of successful extensions: 1186
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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