Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_B16
(798 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101327-1|AAI01328.1| 550|Homo sapiens chromosome 5 open readi... 39 0.018
BC101326-1|AAI01327.1| 550|Homo sapiens chromosome 5 open readi... 39 0.018
BC101325-1|AAI01326.1| 550|Homo sapiens chromosome 5 open readi... 39 0.018
AK093098-1|BAC04054.1| 550|Homo sapiens protein ( Homo sapiens ... 39 0.018
BC101328-1|AAI01329.1| 268|Homo sapiens C5orf37 protein protein. 38 0.055
AK074886-1|BAC11267.1| 207|Homo sapiens protein ( Homo sapiens ... 33 1.6
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.6
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.6
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.6
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.6
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.6
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.6
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.6
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.6
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 30 8.4
AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens ... 30 8.4
>BC101327-1|AAI01328.1| 550|Homo sapiens chromosome 5 open reading
frame 37 protein.
Length = 550
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +3
Query: 393 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAPYASSHPPLANLGLXQX 572
PSAP + +PVT L + V G + A PS++ +T A +S H P++ LG
Sbjct: 378 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSA 436
Query: 573 RIIKSPEFHTP 605
S E + P
Sbjct: 437 ATAASEEMYVP 447
>BC101326-1|AAI01327.1| 550|Homo sapiens chromosome 5 open reading
frame 37 protein.
Length = 550
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +3
Query: 393 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAPYASSHPPLANLGLXQX 572
PSAP + +PVT L + V G + A PS++ +T A +S H P++ LG
Sbjct: 378 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSA 436
Query: 573 RIIKSPEFHTP 605
S E + P
Sbjct: 437 ATAASEEMYVP 447
>BC101325-1|AAI01326.1| 550|Homo sapiens chromosome 5 open reading
frame 37 protein.
Length = 550
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +3
Query: 393 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAPYASSHPPLANLGLXQX 572
PSAP + +PVT L + V G + A PS++ +T A +S H P++ LG
Sbjct: 378 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSA 436
Query: 573 RIIKSPEFHTP 605
S E + P
Sbjct: 437 ATAASEEMYVP 447
>AK093098-1|BAC04054.1| 550|Homo sapiens protein ( Homo sapiens
cDNA FLJ35779 fis, clone TESTI2005380. ).
Length = 550
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +3
Query: 393 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAPYASSHPPLANLGLXQX 572
PSAP + +PVT L + V G + A PS++ +T A +S H P++ LG
Sbjct: 378 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSA 436
Query: 573 RIIKSPEFHTP 605
S E + P
Sbjct: 437 ATAASEEMYVP 447
>BC101328-1|AAI01329.1| 268|Homo sapiens C5orf37 protein protein.
Length = 268
Score = 37.5 bits (83), Expect = 0.055
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +3
Query: 393 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAPYASSHPPLANLGLXQX 572
PSAP + +PVT L + V G + A PS++ +T A +S H P++ LG
Sbjct: 155 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSA 213
Query: 573 RIIKSPEFHT 602
S E T
Sbjct: 214 ATAASEEMQT 223
>AK074886-1|BAC11267.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ90405 fis, clone NT2RP2006099. ).
Length = 207
Score = 32.7 bits (71), Expect = 1.6
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +2
Query: 521 PLCIKPPSPGESRATSXPNH--QIPRIPYXK--PPPNLXSNFPSIPLNPVLKG-ISXPGV 685
P C + S G RATS P + PR P + PP+ S+ P + P+ G S PG
Sbjct: 63 PRCARAASRGRQRATSGPRRSPRRPRCPAPRRADPPSPRSDTPISAVRPLAPGPSSSPGA 122
Query: 686 KXPXGXQKGP 715
G P
Sbjct: 123 GRAPGAMASP 132
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +2
Query: 536 PPSPGESRATSXPNHQIPRIPYXKPPPNLXSNF--PSIPLNP-VLKGISXPGVKXPXGXQ 706
PP G+ R P P P+ PPP L S P +P P G S P ++ P Q
Sbjct: 4 PPFFGQGRPGPPPPQPPPPAPFGCPPPPLPSPAFPPPLPQRPGPFPGASAPFLQPPLALQ 63
>AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22184 fis, clone HRC00983. ).
Length = 616
Score = 30.3 bits (65), Expect = 8.4
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 533 KPPSPGESRATSXPNHQIPRIPYXKPPPNLXSNFPSIPLN-PVLKGISXPGVKXP---XG 700
+PP+PG + S P + P PPP S PS L+ P L G S P G
Sbjct: 349 RPPTPGPDTSVSGPRLTLALAPGPPPPP---SRSPSSTLSGPDLAGHSSSATSTPEELRG 405
Query: 701 XQKGP 715
GP
Sbjct: 406 YDSGP 410
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,667,957
Number of Sequences: 237096
Number of extensions: 2536023
Number of successful extensions: 5340
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5292
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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