Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_B13
         (922 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78417-4|CAB01685.2|  531|Caenorhabditis elegans Hypothetical pr...    33   0.29 
Z50029-2|CAA90341.3|  537|Caenorhabditis elegans Hypothetical pr...    32   0.66 
U39855-1|AAA81080.3|  615|Caenorhabditis elegans Hypothetical pr...    31   0.88 
AC024207-2|AAL77193.1|  425|Caenorhabditis elegans Hypothetical ...    30   2.7  
AC024207-1|AAL77194.1|  428|Caenorhabditis elegans Hypothetical ...    30   2.7  
AL110479-15|CAB54361.2|  400|Caenorhabditis elegans Hypothetical...    29   3.5  
U28928-2|AAA68335.2|  329|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>Z78417-4|CAB01685.2|  531|Caenorhabditis elegans Hypothetical
           protein C35C5.5 protein.
          Length = 531

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 257 LQMNWIDQRLTWNAGEWG 310
           L+M W D++LTWN  +WG
Sbjct: 81  LEMQWYDKKLTWNPTDWG 98


>Z50029-2|CAA90341.3|  537|Caenorhabditis elegans Hypothetical
           protein ZC504.2 protein.
          Length = 537

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 257 LQMNWIDQRLTWNAGEWG 310
           L+M W D RL W+ G WG
Sbjct: 77  LEMQWFDYRLMWDPGRWG 94


>U39855-1|AAA81080.3|  615|Caenorhabditis elegans Hypothetical
           protein F18G5.4 protein.
          Length = 615

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = +2

Query: 146 YDRDSPPELQNRSQPDPAF*YMLTFV----SPSPPLRIQADLQMNWIDQRLTWNAGEW 307
           Y++D  P + +    +  F ++L  +      +  L  ++ L +NW+D RL+WN   W
Sbjct: 124 YEKDVRPCIHHSQPTNVTFGFLLNQIVEMDERNQALTTRSWLNINWMDPRLSWNESLW 181


>AC024207-2|AAL77193.1|  425|Caenorhabditis elegans Hypothetical
           protein Y74E4A.1a protein.
          Length = 425

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 239 LRIQADLQMNWIDQRLTWNAGEW 307
           + I   L+++W D+RL WN  EW
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEW 123


>AC024207-1|AAL77194.1|  428|Caenorhabditis elegans Hypothetical
           protein Y74E4A.1b protein.
          Length = 428

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 239 LRIQADLQMNWIDQRLTWNAGEW 307
           + I   L+++W D+RL WN  EW
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEW 123


>AL110479-15|CAB54361.2|  400|Caenorhabditis elegans Hypothetical
           protein Y105C5B.16 protein.
          Length = 400

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 227 PSPPLRIQADLQMNWIDQRLTWNAGEWGCST 319
           P   + +  ++   W D RL+WNA  W  +T
Sbjct: 89  PQEKISVVMEIMEYWYDARLSWNASAWQNTT 119


>U28928-2|AAA68335.2|  329|Caenorhabditis elegans Hypothetical
           protein C44B7.4 protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 29  VDDLYYSCYQFLLTCAIASAAECENATSLS 118
           +D  YY CY+    C I+ A  C+N+T L+
Sbjct: 124 LDGGYYRCYRSHEFCLISDAILCKNSTILN 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,460,757
Number of Sequences: 27780
Number of extensions: 196699
Number of successful extensions: 574
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)