Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_B08
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   6.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 197 EGLCKWIASFLDGRSITVVV 256
           EGLCK + S LD +   VVV
Sbjct: 558 EGLCKVMKSILDNKVEKVVV 577


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
 Frame = +2

Query: 233 GRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILY--INDMLSIDGMHCYADDSTGDAR 406
           GRS T+    +      I     +G       F+ Y  I DML  +G H   D+S     
Sbjct: 421 GRSFTLQFTNETQVGAPIKGPGREGFYTQNPGFLAYFEICDMLLNEGWHKGMDESGSPYM 480

Query: 407 YIGHQSLSRSVVQERRSKLVSEVENSLGRVSKW 505
             G Q +     +    K+    E +LG V  W
Sbjct: 481 VYGDQWVGYDDSESVEKKVNYVQEMNLGGVFIW 513


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 281 TINAGVPQGSVLSP 322
           T + G+PQG VL+P
Sbjct: 442 TYDYGIPQGVVLNP 455


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 281 TINAGVPQGSVLSP 322
           T + G+PQG VL+P
Sbjct: 442 TYDYGIPQGVVLNP 455


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,934
Number of Sequences: 336
Number of extensions: 3391
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)