Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_B08
         (828 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   1.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   1.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   8.0  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 518 SSIHPIWRLAPESSPLQTQVLIVSLAPRSERDSDG 414
           S +   W+  PE+  L+  +++  + PRS +DS+G
Sbjct: 13  SIVDAAWKPLPEN--LKEDLIVYQVYPRSFKDSNG 45


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 518 SSIHPIWRLAPESSPLQTQVLIVSLAPRSERDSDG 414
           S +   W+  PE+  L+  +++  + PRS +DS+G
Sbjct: 13  SIVDAAWKPLPEN--LKEDLIVYQVYPRSFKDSNG 45


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 399 SPVLSSA*QCMPSIDSMSLI 340
           +PVL S  Q  PSIDS + I
Sbjct: 531 TPVLPSRFQSHPSIDSANTI 550


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,114
Number of Sequences: 438
Number of extensions: 4516
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)