Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_B07
         (903 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2GQA3 Cluster: Putative uncharacterized protein; n=1; ...    35   2.5  
UniRef50_UPI0000D55EDD Cluster: PREDICTED: similar to CG11822-PA...    34   5.7  

>UniRef50_Q2GQA3 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 558

 Score = 35.1 bits (77), Expect = 2.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 326 DTSQVXQPHSPCVPTQSXXDPIHLKICLYSHGGLGLTNVSMS 201
           DT+    P +PC PT    +P+ ++   YS GG  +T V +S
Sbjct: 355 DTTDTKLPTTPCPPTTPADEPVAVQGYAYSGGGRAITRVDVS 396


>UniRef50_UPI0000D55EDD Cluster: PREDICTED: similar to CG11822-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG11822-PA, isoform A - Tribolium castaneum
          Length = 438

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 14/46 (30%), Positives = 28/46 (60%)
 Frame = +3

Query: 168 SKIVVNLTLHLRHANIRESESTVRIQADLQMNWIXXRLSWNAXXVG 305
           +K+V  LT+  RH  + E +ST+ + + ++++W   +L WN+   G
Sbjct: 64  TKVVFGLTI--RHIELNEFKSTLVVHSWIRLSWKDEKLQWNSTNYG 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,876,422
Number of Sequences: 1657284
Number of extensions: 7918145
Number of successful extensions: 17052
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17048
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)