Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_B07
         (903 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001633-1|AAN71388.1|  249|Drosophila melanogaster RE38674p pro...    29   8.7  
AY118517-1|AAM49886.1|  249|Drosophila melanogaster LD15729p pro...    29   8.7  
AE014297-1033|AAN13445.2|  249|Drosophila melanogaster CG9473-PB...    29   8.7  
AE014297-1032|AAF54445.2|  249|Drosophila melanogaster CG9473-PA...    29   8.7  

>BT001633-1|AAN71388.1|  249|Drosophila melanogaster RE38674p
           protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = +2

Query: 77  ASAAECENATSL------SLMIDSLLATYDRDSPPVLQNRSQPDPAFETC*HS*VRVHRA 238
           A++A+ EN+ +L       +++  LL  +    PP+LQN  QP PA +            
Sbjct: 166 ANSAKDENSGTLFQKQRVDMLLAELLRKFPPPIPPMLQNLQQPPPAGDD----------L 215

Query: 239 NTGRSSNELDRXTTELERXXSG 304
           NT R+++E++  T  L+    G
Sbjct: 216 NTARNASEMNNATGPLDIKTEG 237


>AY118517-1|AAM49886.1|  249|Drosophila melanogaster LD15729p
           protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = +2

Query: 77  ASAAECENATSL------SLMIDSLLATYDRDSPPVLQNRSQPDPAFETC*HS*VRVHRA 238
           A++A+ EN+ +L       +++  LL  +    PP+LQN  QP PA +            
Sbjct: 166 ANSAKDENSGTLFQKQRVDMLLAELLRKFPPPIPPMLQNLQQPPPAGDD----------L 215

Query: 239 NTGRSSNELDRXTTELERXXSG 304
           NT R+++E++  T  L+    G
Sbjct: 216 NTARNASEMNNATGPLDIKTEG 237


>AE014297-1033|AAN13445.2|  249|Drosophila melanogaster CG9473-PB,
           isoform B protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = +2

Query: 77  ASAAECENATSL------SLMIDSLLATYDRDSPPVLQNRSQPDPAFETC*HS*VRVHRA 238
           A++A+ EN+ +L       +++  LL  +    PP+LQN  QP PA +            
Sbjct: 166 ANSAKDENSGTLFQKQRVDMLLAELLRKFPPPIPPMLQNLQQPPPAGDD----------L 215

Query: 239 NTGRSSNELDRXTTELERXXSG 304
           NT R+++E++  T  L+    G
Sbjct: 216 NTARNASEMNNATGPLDIKTEG 237


>AE014297-1032|AAF54445.2|  249|Drosophila melanogaster CG9473-PA,
           isoform A protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = +2

Query: 77  ASAAECENATSL------SLMIDSLLATYDRDSPPVLQNRSQPDPAFETC*HS*VRVHRA 238
           A++A+ EN+ +L       +++  LL  +    PP+LQN  QP PA +            
Sbjct: 166 ANSAKDENSGTLFQKQRVDMLLAELLRKFPPPIPPMLQNLQQPPPAGDD----------L 215

Query: 239 NTGRSSNELDRXTTELERXXSG 304
           NT R+++E++  T  L+    G
Sbjct: 216 NTARNASEMNNATGPLDIKTEG 237


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,893,728
Number of Sequences: 53049
Number of extensions: 400455
Number of successful extensions: 765
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)