Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_B06
(808 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 39 4e-05
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 39 4e-05
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 39 4e-05
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 37 2e-04
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 37 2e-04
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 24 1.6
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 23 2.9
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 8.7
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 8.7
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 21 8.7
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 39.1 bits (87), Expect = 4e-05
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 390
++ E + A L + W D L WN E+ G ++ +LW+PDV++ N+
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNS 95
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 39.1 bits (87), Expect = 4e-05
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 390
++ E + A L + W D L WN E+ G ++ +LW+PDV++ N+
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNS 95
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 39.1 bits (87), Expect = 4e-05
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 390
++ E + A L + W D L WN E+ G ++ +LW+PDV++ N+
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNS 95
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 37.1 bits (82), Expect = 2e-04
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 390
L + W D L WN E+ G ++ +LW+PDV++ N+
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNS 95
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 37.1 bits (82), Expect = 2e-04
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 390
L + W D L WN E+ G ++ +LW+PDV++ N+
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNS 95
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = -3
Query: 236 MLACLKCRVRLTTILESGGESRSYVARSESIMRDSDVAFSHSAALAIAQ 90
+++ L C + T +L S GE+R ++ + S + S + +A+
Sbjct: 228 VVSTLSCYLERTELLRSSGETRLFLTHRKPFHPASTQSLSRWIKMVLAE 276
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 23.0 bits (47), Expect = 2.9
Identities = 12/56 (21%), Positives = 23/56 (41%)
Frame = +1
Query: 37 SCHKMSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVV 204
+C ++ T + F TC I +CE + +D ++ R+ KI +
Sbjct: 174 ACISIAYTNVSTDAFFYTCLIQIETQCEIVSDTLRNLDKIVTNGFRNVAESRKIFI 229
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 314 QGSGAAALGWCPRN 355
+ S A ALGW P N
Sbjct: 153 KASTAQALGWAPTN 166
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 117 AFCRTSYSTSEEKR*QNNIS 58
A C YST EEK Q N S
Sbjct: 1374 AVCDACYSTIEEKNLQVNES 1393
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 21.4 bits (43), Expect = 8.7
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 407 PPVVAXAFSSTTSGLHKRSEDTSQVLQPHSPA 312
PP+ + A T K E V Q HSPA
Sbjct: 93 PPLESLATVEETVVRDKAVESLRAVAQQHSPA 124
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,482
Number of Sequences: 336
Number of extensions: 2412
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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