Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_B02
(788 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 232 4e-61
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 231 6e-61
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 231 6e-61
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 231 6e-61
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 208 5e-54
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 203 2e-52
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 203 2e-52
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 232 bits (568), Expect = 4e-61
Identities = 103/131 (78%), Positives = 115/131 (87%)
Frame = +1
Query: 4 WHFSLRLSSSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKSVHLTAFIGYK 183
+ F+ + MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SK VHLT FIGYK
Sbjct: 2 FRFTRLKRTDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYK 61
Query: 184 AGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHM 363
AGMTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+
Sbjct: 62 AGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHL 121
Query: 364 SEDCRRRFYKN 396
SE+CRRRFYKN
Sbjct: 122 SEECRRRFYKN 132
Score = 81.4 bits (192), Expect = 1e-15
Identities = 32/46 (69%), Positives = 42/46 (91%)
Frame = +1
Query: 580 WQDELGRKSIEKDFKKMIRYCSVVRVIXHTQMKLLKQRQKKAHIME 717
W D+LG+KSIE DF+KM+RYC V+RVI H+Q++L+KQRQKKAH+ME
Sbjct: 148 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 193
Score = 43.2 bits (97), Expect = 4e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2
Query: 695 KRRLTLWKIQLNGGTIEDKVK*AXKHLEKPI 787
+++ + +IQLNGG+IEDKVK A +HLEKPI
Sbjct: 186 QKKAHVMEIQLNGGSIEDKVKWAREHLEKPI 216
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 231 bits (566), Expect = 6e-61
Identities = 102/121 (84%), Positives = 111/121 (91%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKSVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SK VHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 394 N 396
N
Sbjct: 121 N 121
Score = 81.4 bits (192), Expect = 1e-15
Identities = 32/46 (69%), Positives = 42/46 (91%)
Frame = +1
Query: 580 WQDELGRKSIEKDFKKMIRYCSVVRVIXHTQMKLLKQRQKKAHIME 717
W D+LG+KSIE DF+KM+RYC V+RVI H+Q++L+KQRQKKAH+ME
Sbjct: 137 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 182
Score = 43.2 bits (97), Expect = 4e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2
Query: 695 KRRLTLWKIQLNGGTIEDKVK*AXKHLEKPI 787
+++ + +IQLNGG+IEDKVK A +HLEKPI
Sbjct: 175 QKKAHVMEIQLNGGSIEDKVKWAREHLEKPI 205
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 231 bits (566), Expect = 6e-61
Identities = 102/121 (84%), Positives = 111/121 (91%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKSVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SK VHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 394 N 396
N
Sbjct: 121 N 121
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 231 bits (566), Expect = 6e-61
Identities = 102/121 (84%), Positives = 111/121 (91%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKSVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SK VHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 394 N 396
N
Sbjct: 121 N 121
Score = 81.4 bits (192), Expect = 1e-15
Identities = 32/46 (69%), Positives = 42/46 (91%)
Frame = +1
Query: 580 WQDELGRKSIEKDFKKMIRYCSVVRVIXHTQMKLLKQRQKKAHIME 717
W D+LG+KSIE DF+KM+RYC V+RVI H+Q++L+KQRQKKAH+ME
Sbjct: 137 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 182
Score = 43.2 bits (97), Expect = 4e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2
Query: 695 KRRLTLWKIQLNGGTIEDKVK*AXKHLEKPI 787
+++ + +IQLNGG+IEDKVK A +HLEKPI
Sbjct: 175 QKKAHVMEIQLNGGSIEDKVKWAREHLEKPI 205
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 208 bits (509), Expect = 5e-54
Identities = 91/112 (81%), Positives = 101/112 (90%)
Frame = +1
Query: 73 MGFYPKKRSRRHRGKVKAFPKDDPSKSVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
M FYPKKRS RHRGKVKAFPKDD SK VHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 253 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNCSPL 408
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNCS +
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNCSSI 112
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 203 bits (495), Expect = 2e-52
Identities = 89/108 (82%), Positives = 98/108 (90%)
Frame = +1
Query: 73 MGFYPKKRSRRHRGKVKAFPKDDPSKSVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
M FYPKKRS RHRGKVKAFPKDD SK VHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 253 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Score = 81.4 bits (192), Expect = 1e-15
Identities = 32/46 (69%), Positives = 42/46 (91%)
Frame = +1
Query: 580 WQDELGRKSIEKDFKKMIRYCSVVRVIXHTQMKLLKQRQKKAHIME 717
W D+LG+KSIE DF+KM+RYC V+RVI H+Q++L+KQRQKKAH+ME
Sbjct: 124 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 169
Score = 43.2 bits (97), Expect = 4e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2
Query: 695 KRRLTLWKIQLNGGTIEDKVK*AXKHLEKPI 787
+++ + +IQLNGG+IEDKVK A +HLEKPI
Sbjct: 162 QKKAHVMEIQLNGGSIEDKVKWAREHLEKPI 192
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 203 bits (495), Expect = 2e-52
Identities = 89/108 (82%), Positives = 98/108 (90%)
Frame = +1
Query: 73 MGFYPKKRSRRHRGKVKAFPKDDPSKSVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
M FYPKKRS RHRGKVKAFPKDD SK VHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 253 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Score = 81.4 bits (192), Expect = 1e-15
Identities = 32/46 (69%), Positives = 42/46 (91%)
Frame = +1
Query: 580 WQDELGRKSIEKDFKKMIRYCSVVRVIXHTQMKLLKQRQKKAHIME 717
W D+LG+KSIE DF+KM+RYC V+RVI H+Q++L+KQRQKKAH+ME
Sbjct: 124 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 169
Score = 43.2 bits (97), Expect = 4e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2
Query: 695 KRRLTLWKIQLNGGTIEDKVK*AXKHLEKPI 787
+++ + +IQLNGG+IEDKVK A +HLEKPI
Sbjct: 162 QKKAHVMEIQLNGGSIEDKVKWAREHLEKPI 192
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,641,519
Number of Sequences: 53049
Number of extensions: 746075
Number of successful extensions: 1656
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1656
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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