Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A24
(936 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1613 + 38643833-38643974,38644054-38644190,38644828-386452... 81 9e-16
10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073... 41 0.001
07_01_0101 - 752935-753223,753311-753408,753674-753764,753844-75... 31 1.00
04_04_0639 + 26883810-26883821,26884131-26884307,26885276-268853... 31 1.7
03_02_0727 - 10742899-10744375,10744470-10744933,10745412-10745477 31 1.7
06_03_0791 - 24641350-24641418,24641684-24641965,24642318-246425... 29 4.0
04_04_1153 - 31294014-31294095,31294180-31294261,31294422-312948... 29 7.0
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 29 7.0
10_01_0078 - 1012031-1012084,1012998-1013105,1013610-1013661,101... 28 9.3
09_01_0180 + 2632507-2634870 28 9.3
06_01_0422 + 3034556-3034777,3034859-3035138,3036398-3036483,303... 28 9.3
>01_06_1613 +
38643833-38643974,38644054-38644190,38644828-38645207,
38645487-38645583,38645685-38645972,38646683-38647648
Length = 669
Score = 81.4 bits (192), Expect = 9e-16
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Frame = +1
Query: 88 YLELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNS 267
+ L++ ++ ++ +A+K A ++L AP ++ A CKVV ++ ++ALA + A+
Sbjct: 26 FTTLHRHIEAGEFPQAVKVADQVLAAAPGDEDAVRCKVVAHIKSDAIEKALAAIRAAER- 84
Query: 268 ALAADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQDCYNLYRD 447
L DL + KAY YR N +EAL + E T A+ +L +QI YRL + DC N Y
Sbjct: 85 -LPIDLSYCKAYCYYRQNKLQEALDLLKGQEE-TSAILQLESQIYYRLGRMNDCMNSYEK 142
Query: 448 LLKNTTDEYEDERKXXXXXXXXXXXXXXPTSELPQ---------FDENTYELAYNSGSTL 600
L K + + + + Q D ++ELAYNS +L
Sbjct: 143 LQKFKVESMDLKINIIAALVAAGRASEVQATMKAQKVDLSSRALRDTRSFELAYNSACSL 202
Query: 601 AMRGKYNEA 627
KY+EA
Sbjct: 203 IENKKYSEA 211
>10_08_0435 +
17905728-17905901,17906608-17906931,17907205-17907321,
17908418-17908597,17909064-17909190,17909327-17909440,
17909794-17909909
Length = 383
Score = 41.1 bits (92), Expect = 0.001
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Frame = +1
Query: 40 WTKKMSANKENNLVQAYLELNKFCQSSDYERALKAAGKILQIAPNEQKA----FHC---K 198
W + ++ + A E NKF + +YERAL LQIA + A C +
Sbjct: 199 WWRPCTSKARSQANDAKAEGNKFFGAGEYERALSQYETALQIAAELESAEDIRSACHSNR 258
Query: 199 VVCFLQLHNFKEALATLTNA-KNSALAADLLFEKAYTQYRLNSPKEALQTVDSAPELTPA 375
VCFL+L + E + T A + + L + +L EA+ + EL P+
Sbjct: 259 AVCFLKLGKYDETIKECTKALELNPSYLKALLRRGEAHEKLEHYDEAIADMKKIIELDPS 318
Query: 376 LKELRAQILYRLE 414
E + L+RLE
Sbjct: 319 -NEQAKRSLFRLE 330
>07_01_0101 -
752935-753223,753311-753408,753674-753764,753844-753882,
754019-754110,754535-754634,754742-754828,754949-755250,
756036-756242,756319-756405,756978-757058,757257-757365,
758037-758093,758188-758258,758414-758521,758874-758974,
759111-759177,759434-759535,759618-759662,759916-760511,
761956-762065,762165-762280
Length = 984
Score = 31.5 bits (68), Expect = 1.00
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +1
Query: 127 ERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNA-KNSALAADLLFEKAY 303
E+ L K+LQI + KA+H + + + + + A+ L+ A K+ + + L+ +A
Sbjct: 424 EKMLNNVEKVLQIDVSFGKAYHLRGILYHGMGRHRSAIKDLSVALKHESSNIECLYLRAS 483
Query: 304 TQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQDCYNLY 441
+ + K A++ D +L L + +L L YQ LY
Sbjct: 484 CHHAIGEYKAAIKDYDDVLDL--ELDSMDKFVLQCLAFYQKEIALY 527
>04_04_0639 +
26883810-26883821,26884131-26884307,26885276-26885339,
26886614-26887734,26888193-26888481,26888528-26888658,
26888910-26889133,26889220-26889286,26889744-26889803,
26889896-26889979,26890290-26890301
Length = 746
Score = 30.7 bits (66), Expect = 1.7
Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Frame = +1
Query: 22 DPLLXYWTKKMSANKENNLVQAY-LELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCK 198
DP + ++ +++ L+ + N+F + Y A+K + L+ P + + + +
Sbjct: 544 DPKIADEEREKGGDEDETLILVHSCAGNEFFKQQKYPEAVKHYSEALRRNPKDPRVYSNR 603
Query: 199 VVCFLQLHNFKEALATLTNAKNSALAADLLFEKAYT-----QYRLNSPKEALQTVDSAPE 363
C+ +L E L + D F K YT Q+ + +AL+T + +
Sbjct: 604 AACYTKLGAMPEGL----KDAEKCIELDPTFSKGYTRKGAIQFFMKEYDKALETYQAGLK 659
Query: 364 LTPALKEL 387
P +EL
Sbjct: 660 HDPNNQEL 667
>03_02_0727 - 10742899-10744375,10744470-10744933,10745412-10745477
Length = 668
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +1
Query: 334 ALQTVDSAPELTPALK---ELRAQILYRLEQYQDCYNLYRDLL 453
AL VD+A EL+P ++ ELR + L L +Y+D + RD +
Sbjct: 49 ALGLVDAALELSPRMESALELRGRALLSLRRYRDVAEMLRDYI 91
>06_03_0791 -
24641350-24641418,24641684-24641965,24642318-24642537,
24642657-24642776,24643056-24643132,24643220-24643339,
24644121-24644186,24644265-24644479,24645450-24645582,
24646562-24646708,24647301-24647596,24648222-24648319,
24648425-24648471,24649340-24649449,24649663-24649735,
24650795-24650899
Length = 725
Score = 29.5 bits (63), Expect = 4.0
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = +1
Query: 100 NKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNA-KNSALA 276
+++ DYE ++K LQ+ A++ V +L+ F+ A A + + +
Sbjct: 535 HEYSALEDYENSIKLYRSALQVDERHYNAWYGLGVVYLRQEKFEFAEHHFRRAFQINPCS 594
Query: 277 ADLLFEKAYTQYRLNSPKEALQTVDS---APELTPALKELRAQILYRLEQYQD 426
+ L+ + L +EAL+ +++ A + P K +A IL L++Y D
Sbjct: 595 SVLMCYLGMALHALKRNEEALEMMENAIFADKKNPLPKYQKALILLGLQKYPD 647
>04_04_1153 -
31294014-31294095,31294180-31294261,31294422-31294857,
31295124-31295312,31296190-31296360
Length = 319
Score = 28.7 bits (61), Expect = 7.0
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 169 PNEQKAFHC-KVVCFLQLHNFKEALATLTNA-KNSALAADLLFEKAYTQYRLNSPKEALQ 342
P ++ A H + C+L+LH+F +A T+ + A L +A T L + AL
Sbjct: 35 PAQRIALHSNRAACYLKLHDFHKAAEECTSVLELDREHAGALMLRAQTLVTLKDYQSALF 94
Query: 343 TVDSAPELTPALKELR 390
V+ E+ P+ + R
Sbjct: 95 DVNRLIEINPSSEVYR 110
>04_01_0492 +
6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 304 TQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQDCYNLYRDLLKNTTDEY 474
T Y + A++ ++ +T +LKE A++ QY +LY +LLK E+
Sbjct: 535 TLYSASPVISAIEPQLNSSSMTDSLKEALAELYVINSQYDKALSLYAELLKPEVFEF 591
>10_01_0078 -
1012031-1012084,1012998-1013105,1013610-1013661,
1013926-1016603
Length = 963
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 106 FCQSSDYERALKAAGKILQIAPNEQKAFHCKV-VCFLQLHNFKEALATLTNAKNSALAAD 282
+C+ + E AL G++ + A + + VC ++ KEA ATL LA D
Sbjct: 478 YCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPD 537
Query: 283 -LLFEKAYTQYRL 318
+++ Y L
Sbjct: 538 EIIYTSLINGYSL 550
>09_01_0180 + 2632507-2634870
Length = 787
Score = 28.3 bits (60), Expect = 9.3
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 94 ELNKFCQSSDYERALKAAGKILQIAPN---EQKAFHC-KVVCFLQLHNFKEALATLTNAK 261
E N+ QS DY AL+ L++AP ++ FH + C LQL +
Sbjct: 65 EGNRLFQSRDYGGALRQYELALRLAPRGHPDRAVFHSNRAACLLQLRPVDH--KAVAEEC 122
Query: 262 NSALAADLLFEKA 300
+ AL A+ LF +A
Sbjct: 123 SLALQAEPLFPRA 135
>06_01_0422 +
3034556-3034777,3034859-3035138,3036398-3036483,
3036614-3036837,3036911-3036971,3037634-3037828,
3037981-3038205
Length = 430
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 136 LKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALAT 246
L+ A K +++ P K + CK +HN+++A+ T
Sbjct: 215 LEDADKCIEVDPTFWKGYFCKGEVQFLMHNYEDAMTT 251
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,938,490
Number of Sequences: 37544
Number of extensions: 419472
Number of successful extensions: 1002
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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