Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A24
(936 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g67680.1 68414.m07723 expressed protein 75 7e-14
At1g67650.1 68414.m07720 expressed protein 64 1e-10
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi... 39 0.005
At5g03160.1 68418.m00264 DNAJ heat shock N-terminal domain-conta... 35 0.089
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 31 0.83
At4g29620.1 68417.m04221 cytidine deaminase, putative / cytidine... 31 1.1
At1g12270.1 68414.m01419 stress-inducible protein, putative simi... 31 1.5
At5g41730.1 68418.m05074 protein kinase family protein contains ... 30 1.9
At3g47660.1 68416.m05188 regulator of chromosome condensation (R... 30 1.9
At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transfera... 29 5.9
At2g12940.1 68415.m01419 expressed protein 29 5.9
At5g16640.1 68418.m01948 pentatricopeptide (PPR) repeat-containi... 28 7.7
At2g03480.2 68415.m00308 dehydration-responsive protein-related ... 28 7.7
At2g03480.1 68415.m00307 dehydration-responsive protein-related ... 28 7.7
>At1g67680.1 68414.m07723 expressed protein
Length = 664
Score = 74.9 bits (176), Expect = 7e-14
Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 8/192 (4%)
Frame = +1
Query: 88 YLELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEAL---ATLTNA 258
+ L++ + + YE A+K A ++L I P ++ A CKVV ++ F + L + A
Sbjct: 24 FTSLHQHIKDTKYEEAVKVADQVLSIVPTDEDAIRCKVVALIKDDKFDDYLIKDVKINGA 83
Query: 259 KN-----SALAADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQ 423
+ L DL F KAY YR+N EAL + T L L AQILYRL +
Sbjct: 84 LSVINSFQKLPIDLGFHKAYCLYRVNKLDEALVCLKGLERDTDTL-VLEAQILYRLGKAD 142
Query: 424 DCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXPTSELPQFDENTYELAYNSGSTLA 603
C ++Y+ L K+ + E L +++ELAYN+ +L
Sbjct: 143 ACVDVYQKLTKSQIETLEVNLVAGLISAGKASQVQKTLESLKIKPTSSFELAYNTACSLI 202
Query: 604 MRGKYNEALSVL 639
Y +A +L
Sbjct: 203 ENNNYADAEQLL 214
>At1g67650.1 68414.m07720 expressed protein
Length = 651
Score = 64.1 bits (149), Expect = 1e-10
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 7/191 (3%)
Frame = +1
Query: 88 YLELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAK-N 264
+ L+K + + YE A+K A ++L I P ++ A CKVV ++ F + L + + K N
Sbjct: 20 FTSLHKHIKDTKYEEAVKVADQVLSIVPTDEDAIRCKVVALIKDDKFDDYL--IKDVKIN 77
Query: 265 SALAA------DLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQD 426
AL+ DL F KAY YR N EAL + + L L AQIL L +
Sbjct: 78 GALSVINSFPIDLGFHKAYCLYRENKLDEALVCLKGLERESKTLL-LEAQILNCLGKVDA 136
Query: 427 CYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXPTSELPQFDENTYELAYNSGSTLAM 606
C ++Y+ L K+ E P TY+LAYN+ +L
Sbjct: 137 CVDVYQKLNKSGIKLIEVNLVAALIRAGKASQVLESLKIRP---TTTYQLAYNTACSLIE 193
Query: 607 RGKYNEALSVL 639
Y +A +L
Sbjct: 194 NSNYVDAEQLL 204
>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 883
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/130 (22%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = +1
Query: 55 SANKENNLVQAYLELNKFCQS-SDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFK 231
S ++N ++A+L L +F Q +D+ +AL+ ++LQ+ KA+H + + F L +
Sbjct: 459 SIQLDSNYLEAWLHLAQFYQELADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHR 518
Query: 232 EALATLTNAKNSALAADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRL 411
+A+ L+ + + L+ + + + ++A++ D+ ++ L + +L L
Sbjct: 519 KAIQELSIGLSIENTIECLYLRGSCYHAVGEYRDAVKDYDATVDV--ELDAVEKFVLQCL 576
Query: 412 EQYQDCYNLY 441
YQ LY
Sbjct: 577 AFYQKELALY 586
>At5g03160.1 68418.m00264 DNAJ heat shock N-terminal
domain-containing protein similar to P58 protein, Bos
primigenius taurus, PIR:A56534; similar to p58
(GI:1353270) {Homo sapiens}; contains Pfam PF00226: DnaJ
domain; contains Pfam PF00515: TPR Domain
Length = 482
Score = 34.7 bits (76), Expect = 0.089
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +1
Query: 286 LFEKAYTQYRLNSPKEALQTVDSAPELTPALKEL---RAQILYRLEQYQDCYNLYRDLLK 456
LFE+A ++ +AL +++A E PAL E RA +L +Y+D N Y+ L+
Sbjct: 53 LFERASQSIKVKRYSDALDDLNAAIEADPALSEAYFKRASVLRHFCRYEDSENSYQKYLE 112
Query: 457 NTTDEYEDERK 489
+ + E++
Sbjct: 113 FKSGDSNAEKE 123
>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
(VPS41) 99.8% identical to Vacuolar assembly protein
VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
similar to vacuolar assembly protein vps41 GI:1835787
from [Lycopersicon esculentum]
Length = 980
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 334 ALQTVDSAPELTPALKELRAQILYRLEQYQDCYNLYRDLLK 456
A++ + +T ALKE A++ QYQ ++LY DLLK
Sbjct: 538 AIEPQLNTSSMTDALKEALAELYVIDGQYQKAFSLYADLLK 578
>At4g29620.1 68417.m04221 cytidine deaminase, putative / cytidine
aminohydrolase, putative identical to cytidine deaminase
2 (CDA2) [Arabidopsis thaliana] GI:5080713, cytidine
deaminase homolog DesE [Arabidopsis thaliana]
GI:4836447; similar to cytidine deaminase (CDD)
[Arabidopsis thaliana] GI:3046700; contains Pfam profile
PF00383: Cytidine and deoxycytidylate deaminase
zinc-binding
Length = 337
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 10 LGILDPLLXYWTKKMSANKENNLVQAYLELNKFCQSSDYERALKAAGKILQIAPN-EQKA 186
LG + L + + N +VQA L + K S ER K + IAPN + K
Sbjct: 250 LGPVQAALVDFVARSRGKMFNKIVQAVL-VEKNNASVSQERTAKII--LDTIAPNCDFKV 306
Query: 187 FHCKVVCFLQLHNFKEAL 240
FHC V C +L +E L
Sbjct: 307 FHCSVDCAKRLKYLRETL 324
>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 572
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Frame = +1
Query: 100 NKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAA 279
N F + Y A+K + ++ PN+ KA+ + + +L E L +
Sbjct: 391 NDFFKEQKYPEAIKHYTEAIKRNPNDHKAYSNRAASYTKLGAMPEGL----KDAEKCIEL 446
Query: 280 DLLFEKAYT-----QYRLNSPKEALQTVDSAPELTPALKEL 387
D F K Y+ Q+ L A++T + E P+ +EL
Sbjct: 447 DPTFSKGYSRKAAVQFFLKEYDNAMETYQAGLEHDPSNQEL 487
>At5g41730.1 68418.m05074 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 711
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 37 YWTKKMSANKENNLVQAYLELNKFCQSSDYERALKAAGKILQIAPNEQK 183
+W K ++ ++ + V+ ++ N FC S A++AAG+I + P+E +
Sbjct: 92 WWGKVINLHQNKDCVEFHIH-NLFCYFSAVVEAIEAAGEISGLDPSEME 139
>At3g47660.1 68416.m05188 regulator of chromosome condensation
(RCC1) family protein contains Pfam domain PF00415:
Regulator of chromosome condensation (RCC1)
Length = 951
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 106 FCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAADL 285
FC S +++L AA +AP + + C+++L +E+LAT NSA ++
Sbjct: 665 FCNSCTSKKSLAAA-----MAPKTNRPYRVCDDCYIKLEGIRESLAT---PANSARFSNA 716
Query: 286 LFEKAYTQYRLN-SPKEALQTVDS 354
+Y + +P+ L VDS
Sbjct: 717 SLPSSYEMDEIGITPQRQLLRVDS 740
>At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase ;simalr to
UDP-glucose:sinapate glucosyltransferase GI:9794913 from
[Brassica napus]
Length = 479
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 130 RALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLT 252
R L+ GKI++ P E+ H + CFL + + LT
Sbjct: 332 RELEEKGKIVEWCPQERVLAHPAIACFLSHCGWNSTMEALT 372
>At2g12940.1 68415.m01419 expressed protein
Length = 294
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/104 (22%), Positives = 44/104 (42%)
Frame = +1
Query: 94 ELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSAL 273
ELNK +S+ + ++ +I N + A H K + N + + + N S
Sbjct: 132 ELNKIAKSNKLKEVALDPKEVRRILKNRESAAHLKQKKLQYMINLEHRINFVENENASIF 191
Query: 274 AADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILY 405
L E T +N KE + ++S E+ L+++ + L+
Sbjct: 192 EKIKLLENDKTM-MMNEKKEIMIRIESM-EIQAQLRDVLTEHLH 233
>At5g16640.1 68418.m01948 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 504
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 22 DPLLXYWTKKMSANKENNLVQAYLELNKFCQSSDYERALKAAGKILQI 165
D ++ W + +NL + LN FC+ S AL GK++++
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKL 145
>At2g03480.2 68415.m00308 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase;
non-consensus GA donor site at exon 4
Length = 595
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 238 LATLTNAKNSALAADLLFEKAYTQYRLNSPKEALQTVD-SAPELTPALKELRAQILYRLE 414
LA LT+ + ++ L Y+ YR + A+ +D + L +LKE R E
Sbjct: 36 LAPLTSNSYDSSSSSTLVPNIYSNYRRIKEQAAVDYLDLRSLSLGASLKEFPFCGKER-E 94
Query: 415 QYQDCYNLYRDLLKNTTDEYEDER 486
Y CYN+ +LL + E +R
Sbjct: 95 SYVPCYNITGNLLAGLQEGEELDR 118
>At2g03480.1 68415.m00307 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase;
non-consensus GA donor site at exon 4
Length = 606
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 238 LATLTNAKNSALAADLLFEKAYTQYRLNSPKEALQTVD-SAPELTPALKELRAQILYRLE 414
LA LT+ + ++ L Y+ YR + A+ +D + L +LKE R E
Sbjct: 36 LAPLTSNSYDSSSSSTLVPNIYSNYRRIKEQAAVDYLDLRSLSLGASLKEFPFCGKER-E 94
Query: 415 QYQDCYNLYRDLLKNTTDEYEDER 486
Y CYN+ +LL + E +R
Sbjct: 95 SYVPCYNITGNLLAGLQEGEELDR 118
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,422,914
Number of Sequences: 28952
Number of extensions: 328894
Number of successful extensions: 881
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2236853040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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