BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_FL5_A23 (921 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 32 0.56 07_03_1747 + 29188568-29188715,29188793-29189541 31 1.7 11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 30 2.3 08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.9 07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 9.1 02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 9.1 01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 9.1 >05_03_0366 - 13102147-13102281,13102560-13102739,13102791-13102992, 13104385-13104575 Length = 235 Score = 32.3 bits (70), Expect = 0.56 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = -1 Query: 342 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 178 H P AAA P VP++ P L + GG GL S S + G + D G+GG Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61 >07_03_1747 + 29188568-29188715,29188793-29189541 Length = 298 Score = 30.7 bits (66), Expect = 1.7 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +2 Query: 395 PPPGTTLSAPVYLITAPSPG*SAWTLALQFLCS*TIGPTTCRLARSSSVLG 547 PPP TT++ V L TA + S + QF+C+ TTC + S S+ G Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260 >11_06_0411 - 23230580-23230795,23231407-23231862,23232142-23232195, 23232251-23232367 Length = 280 Score = 30.3 bits (65), Expect = 2.3 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +3 Query: 240 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 356 V+ H + R S EL+RQ ELER+G L+ G L + Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127 >08_02_1291 + 25930056-25930067,25930289-25930334,25930434-25930546, 25930645-25930930,25931357-25931421,25931642-25931693, 25931774-25931883,25932611-25932641,25932853-25933004, 25934622-25934840 Length = 361 Score = 29.5 bits (63), Expect = 3.9 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -1 Query: 255 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 166 +GG L ++Q G Y +G GGRLP+ Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129 >07_03_0809 - 21669632-21669637,21669871-21670131,21670573-21670752, 21671458-21672819 Length = 602 Score = 28.3 bits (60), Expect = 9.1 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = +1 Query: 127 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 282 +L +D L+ YD+ PPDS+ V HA + +R+L + +N Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209 >02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771, 1982950-1983087 Length = 1228 Score = 28.3 bits (60), Expect = 9.1 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -3 Query: 424 GRGERSPRRWLQPRLAVPRQASTSVPRTP 338 GRG RS R L+P LA+ A + +P P Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470 >01_07_0188 - 41866689-41866763,41866889-41867155,41867277-41867722, 41867945-41868033,41868279-41868368,41868661-41868739, 41868979-41869042,41869597-41869684,41869776-41869836, 41869906-41869969,41870134-41870188,41870275-41870346, 41870469-41870551,41870629-41870724,41871279-41871383, 41872159-41872227,41872470-41872561,41872667-41872886 Length = 704 Score = 28.3 bits (60), Expect = 9.1 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = -1 Query: 369 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 202 ++PP H + AP P +P+ S P++ + PH S +QM Q+ Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,129,473 Number of Sequences: 37544 Number of extensions: 548204 Number of successful extensions: 1557 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1495 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1555 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2624101760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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