Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_A19
         (861 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   1.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   1.2  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   1.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   4.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   8.4  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 419 FTGASCAATCIVWLAAKSQHFTLSSVEAIKTFVPSSCQATS 297
           F G +   TCI+WLA    +F   +  A +T + + C A S
Sbjct: 707 FIGFTMYTTCIIWLAFVPIYF--GTGNAHETQITTLCVAIS 745


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 419 FTGASCAATCIVWLAAKSQHFTLSSVEAIKTFVPSSCQATS 297
           F G +   TCI+WLA    +F   +  A +T + + C A S
Sbjct: 797 FIGFTMYTTCIIWLAFVPIYF--GTGNAHETQITTLCVAIS 835


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 514 PSMTLNLTERAYCADVEYP 570
           P   +N+T + YC D+E P
Sbjct: 314 PGTGINVTLKGYCIDMEVP 332


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 366 PTLHTFVC*SHKNLRPIIMPGDI 298
           P LH F   +   L+ ++MP DI
Sbjct: 156 PKLHVFDLNTSHQLKQVVMPHDI 178


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 230 HLTWQSQLPAIR 195
           HL W S +P+IR
Sbjct: 470 HLVWNSWMPSIR 481


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,643
Number of Sequences: 438
Number of extensions: 5569
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)