Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A19
(861 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 155 5e-38
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 124 8e-29
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 66 2e-11
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 65 5e-11
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 58 1e-08
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 58 1e-08
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 58 1e-08
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 57 2e-08
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 56 2e-08
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 54 2e-07
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 53 2e-07
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 53 2e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 53 2e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 53 3e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 52 4e-07
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 52 4e-07
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 52 4e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 52 7e-07
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 50 2e-06
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 49 5e-06
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 48 8e-06
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 48 8e-06
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 48 1e-05
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 46 1e-05
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 47 1e-05
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 47 1e-05
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 47 2e-05
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 45 6e-05
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 45 6e-05
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 44 1e-04
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 44 1e-04
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 44 1e-04
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 44 1e-04
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 44 2e-04
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 43 2e-04
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 43 3e-04
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 43 3e-04
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 42 4e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 42 7e-04
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 41 0.001
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 40 0.002
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 40 0.002
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 40 0.002
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 40 0.003
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 39 0.005
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 39 0.005
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 39 0.005
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 39 0.005
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 38 0.007
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 38 0.011
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 38 0.011
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 37 0.015
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 37 0.015
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 37 0.015
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 37 0.015
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 37 0.015
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 37 0.015
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 37 0.020
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 37 0.020
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 37 0.020
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 37 0.020
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 36 0.026
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 36 0.026
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 36 0.026
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 36 0.035
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 36 0.046
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 35 0.061
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 35 0.061
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 35 0.061
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 35 0.061
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 35 0.061
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 35 0.080
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 35 0.080
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 35 0.080
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 35 0.080
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 34 0.11
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 34 0.14
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 34 0.14
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 34 0.14
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 34 0.14
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 34 0.14
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 34 0.14
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 34 0.14
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 34 0.14
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 34 0.14
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 34 0.14
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 34 0.14
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 33 0.18
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 33 0.18
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 33 0.18
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 33 0.18
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 33 0.18
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 33 0.18
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 33 0.24
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 33 0.24
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 33 0.24
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 33 0.24
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 33 0.24
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 33 0.32
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 33 0.32
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 32 0.43
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 32 0.56
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 31 0.75
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 31 0.75
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 31 0.99
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 31 0.99
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 31 1.3
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 31 1.3
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 31 1.3
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 31 1.3
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 31 1.3
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 31 1.3
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 31 1.3
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 31 1.3
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 31 1.3
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 30 1.7
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 30 1.7
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 30 1.7
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 30 1.7
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 30 2.3
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 30 2.3
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 29 3.0
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 29 3.0
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 29 4.0
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 29 4.0
At2g43500.1 68415.m05405 RWP-RK domain-containing protein low si... 29 4.0
At5g55440.1 68418.m06906 hypothetical protein contains Pfam prof... 29 5.3
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 29 5.3
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 29 5.3
At3g14240.1 68416.m01803 subtilase family protein contains simil... 29 5.3
At1g79090.2 68414.m09222 expressed protein 11408 (cDNA not full... 29 5.3
At1g79090.1 68414.m09221 expressed protein 11408 (cDNA not full... 29 5.3
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 28 7.0
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 28 7.0
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 28 7.0
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 28 9.2
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 28 9.2
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 28 9.2
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 155 bits (375), Expect = 5e-38
Identities = 81/179 (45%), Positives = 106/179 (59%), Gaps = 4/179 (2%)
Frame = +1
Query: 73 FGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSG 252
FG+ +T ++NPNK EV+ P D++S+L FSP + L+A SWD QVRCWE+ SG
Sbjct: 4 FGAP-ATANSNPNKSYEVTPSPADSISSLSFSPRA----DILVATSWDNQVRCWEISRSG 58
Query: 253 KTV---PKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL-AANQTMQVAAHDAPVK 420
++ PKA+ D PVL AW DDGT VF D+ K W L + Q + VA H+ P+
Sbjct: 59 ASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIA 118
Query: 421 TCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLNLTERAYCADVEYPMAVVGTAXR 597
WI P L T SWDKTLK+WDTR P T L ++ Y V++P+ VVGTA R
Sbjct: 119 AMAWI--PGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADR 175
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 124 bits (299), Expect = 8e-29
Identities = 63/142 (44%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Frame = +1
Query: 76 GSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGK 255
G + ++ +NNPN E++ P D++S+L FSP + L+A SWDCQVRCWE+ S
Sbjct: 5 GDKATSSTNNPNNSYEITPPATDSISSLSFSPKA----DILVATSWDCQVRCWEITRSDG 60
Query: 256 TV---PKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLAAN-QTMQVAAHDAPVKT 423
++ PK + D PVL AW DDGT VF D+ K W L + Q VA HDAP
Sbjct: 61 SIASEPKVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQ 120
Query: 424 CHWIKAPNYTCLMTTSWDKTLK 489
WI P L+T SWDKTLK
Sbjct: 121 IAWI--PGMNLLVTGSWDKTLK 140
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 66.5 bits (155), Expect = 2e-11
Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Frame = +1
Query: 106 PNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD 285
P+ E+S+PP D +S L FS S L+ SWD +VR ++V T+ K
Sbjct: 6 PSAGRELSNPPSDGISNLRFSNNS----DHLLVSSWDKRVRLYDVSTNSL---KGEFLHG 58
Query: 286 GPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMT 465
G VLD +HDD + F D V+ + + HD V+ + A ++T
Sbjct: 59 GAVLDCCFHDDFSG-FSVGADYKVRRIVFNVGKEDILGTHDKAVRCVEYSYAAGQ--VIT 115
Query: 466 TSWDKTLKFWDTRTAV-PSMTLNLT----ERAYCADVEYPMAVVGTAXRXHLXVHXWR 624
SWDKT+K WD R A P T T ER Y + VV TA R H+ ++ R
Sbjct: 116 GSWDKTVKCWDPRGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGR-HVNIYDLR 172
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 65.3 bits (152), Expect = 5e-11
Identities = 43/130 (33%), Positives = 62/130 (47%)
Frame = +1
Query: 121 EVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLD 300
E+S+PP D +S L FS S L+ SWD VR ++ + + G VLD
Sbjct: 10 ELSNPPSDGISNLRFSNNS----DHLLVSSWDKSVRLYDANGD---LMRGEFKHGGAVLD 62
Query: 301 VAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDK 480
+HDD + F D V+ D A + + H+ PV+ + A ++T SWDK
Sbjct: 63 CCFHDDSSG-FSVCADTKVRRIDFNAGKEDVLGTHEKPVRCVEYSYAAGQ--VITGSWDK 119
Query: 481 TLKFWDTRTA 510
T+K WD R A
Sbjct: 120 TIKCWDPRGA 129
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/129 (29%), Positives = 68/129 (52%)
Frame = +1
Query: 118 VEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVL 297
+E +P +D VS L FSP S L + SWD +R ++VE+S ++ +Q +L
Sbjct: 6 LEFENPIEDAVSRLRFSPQSNNL----LVASWDSYLRLYDVESSSLSLELNSQ---AALL 58
Query: 298 DVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWD 477
D + ++ T F + +D ++ +DL A + HD + T + + +++T +D
Sbjct: 59 DCCFENESTS-FTSGSDGFIRRYDLNAGTVDTIGRHD-DISTSI-VYSYEKGEVISTGFD 115
Query: 478 KTLKFWDTR 504
+ +KFWDTR
Sbjct: 116 EKIKFWDTR 124
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/129 (29%), Positives = 68/129 (52%)
Frame = +1
Query: 118 VEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVL 297
+E +P +D VS L FSP S L + SWD +R ++VE+S ++ +Q +L
Sbjct: 6 LEFENPIEDAVSRLRFSPQSNNL----LVASWDSYLRLYDVESSSLSLELNSQ---AALL 58
Query: 298 DVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWD 477
D + ++ T F + +D ++ +DL A + HD + T + + +++T +D
Sbjct: 59 DCCFENESTS-FTSGSDGFIRRYDLNAGTVDTIGRHD-DISTSI-VYSYEKGEVISTGFD 115
Query: 478 KTLKFWDTR 504
+ +KFWDTR
Sbjct: 116 EKIKFWDTR 124
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
F ++GSWD ++R W++ T T D VL VA+ D ++ AS D ++K W+
Sbjct: 77 FALSGSWDGELRLWDLATGESTRRFVGHTKD--VLSVAFSTDNRQIVSASRDRTIKLWNT 134
Query: 373 AANQTMQVAAHDAPVKTCHWIK-APN--YTCLMTTSWDKTLKFWDTRTAVPSMTL 528
++ D + ++ +PN +++ SWDKT+K W+ + TL
Sbjct: 135 LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTL 189
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP---VLDVAWHDDGTKVFMASTDESVKCW 366
++ S D + W++ K+ A + M G V DV DG S D ++ W
Sbjct: 31 IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 90
Query: 367 DLAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 501
DLA + T + H V + + + + +++ S D+T+K W+T
Sbjct: 91 DLATGESTRRFVGHTKDVLSVAF--STDNRQIVSASRDRTIKLWNT 134
Score = 35.9 bits (79), Expect = 0.035
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 327
VS + FSP TL +++ SWD V+ W ++ A G + VA DG+
Sbjct: 152 VSCVRFSPN--TLVPTIVSASWDKTVKVWNLQNCKLRNTLAGH--SGYLNTVAVSPDGSL 207
Query: 328 VFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD--T 501
D + WDLA + + + + + + + C T + +++ WD +
Sbjct: 208 CASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAAT---ENSIRIWDLES 264
Query: 502 RTAVPSMTLNLTERAYCAD 558
++ V + ++L A D
Sbjct: 265 KSVVEDLKVDLKAEAEKTD 283
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
F ++GSWD ++R W++ T T D VL VA+ D ++ AS D ++K W+
Sbjct: 77 FALSGSWDGELRLWDLATGETTRRFVGHTKD--VLSVAFSTDNRQIVSASRDRTIKLWNT 134
Query: 373 AANQTMQVAAHDAPVKTCHWIK-APN--YTCLMTTSWDKTLKFWD 498
++ D + ++ +PN +++ SWDKT+K W+
Sbjct: 135 LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP---VLDVAWHDDGTKVFMASTDESVKCW 366
++ S D + W++ K+ A + + G V DV DG S D ++ W
Sbjct: 31 IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 367 DLAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 501
DLA + T + H V + + + + +++ S D+T+K W+T
Sbjct: 91 DLATGETTRRFVGHTKDVLSVAF--STDNRQIVSASRDRTIKLWNT 134
Score = 35.5 bits (78), Expect = 0.046
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 327
VS + FSP TL +++ SWD V+ W ++ + + G + VA DG+
Sbjct: 152 VSCVRFSPN--TLVPTIVSASWDKTVKVWNLQNC--KLRNSLVGHSGYLNTVAVSPDGSL 207
Query: 328 VFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD--T 501
D + WDLA + + + + + + + C T + +++ WD +
Sbjct: 208 CASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAAT---ENSIRIWDLES 264
Query: 502 RTAVPSMTLNLTERA 546
++ V + ++L A
Sbjct: 265 KSVVEDLKVDLKSEA 279
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 327
V +++++P T + SWD V+ W ++ + + V W+
Sbjct: 109 VQSVDYNP---TRRDSFLTSSWDDTVKLWAMDRPASV--RTFKEHAYCVYQAVWNPKHGD 163
Query: 328 VFM-ASTDESVKCWDLAA-NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 501
VF AS D +++ WD+ TM + AHD + +C W K + L T+S DKT+K WD
Sbjct: 164 VFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDD-CILATSSVDKTVKVWDV 222
Query: 502 RT-AVPSMTLN 531
R+ VP LN
Sbjct: 223 RSYRVPLAVLN 233
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 53.6 bits (123), Expect = 2e-07
Identities = 36/131 (27%), Positives = 63/131 (48%)
Frame = +1
Query: 97 SNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQ 276
+ +P + ++V + V + F+PPS +++GS+D +R WEV+T GK V + +
Sbjct: 114 ARSPYECLKVLRGHTNFVFCVNFNPPS----NLIVSGSFDETIRIWEVKT-GKCV-RMIK 167
Query: 277 PMDGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTC 456
P+ V ++ DG+ + AS D S K WD ++ D +PN
Sbjct: 168 AHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKF 227
Query: 457 LMTTSWDKTLK 489
++ + D TLK
Sbjct: 228 ILVATLDSTLK 238
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDL-AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTT 468
+ D+AW D AS D +++ WD + + ++V C P+ +++
Sbjct: 88 ISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPS-NLIVSG 146
Query: 469 SWDKTLKFWDTRT 507
S+D+T++ W+ +T
Sbjct: 147 SFDETIRIWEVKT 159
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 53.2 bits (122), Expect = 2e-07
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 9/160 (5%)
Frame = +1
Query: 61 KSTMFGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTL-----HTFLIAGSWDCQV 225
+ST G +S N E S + V++L V+ H + + SWD V
Sbjct: 236 ESTSEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSV 295
Query: 226 RCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQT----MQ 393
R W+VET GK +DV + + +D ++ WD T Q
Sbjct: 296 RRWDVET-GKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPGTSAPVFQ 353
Query: 394 VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAV 513
++H + + C W K+ ++ L++ S+D + WD RTAV
Sbjct: 354 FSSHSSWISACKWHKS-SWFHLLSASYDGKIMLWDLRTAV 392
Score = 33.9 bits (74), Expect = 0.14
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Frame = +1
Query: 106 PNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD 285
P K+ E S DD VSA+ S P F++ G +D R W S + +
Sbjct: 100 PRKEEEPSLH-DDWVSAVNGSSPR-----FILTGCYDGLGRVWSSAGSCSHILEGHSGAI 153
Query: 286 GPVLDVAWHDDGT-KVFMASTDESVKCWDL----AANQTMQVAA------HDAPVKTCHW 432
V V +D T V AS D +++ + + + T +V A H A V++
Sbjct: 154 SSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSA 213
Query: 433 IKAPNYTCLMTTSWDKTLKFWDT 501
K+ N C ++SWD T+ W+T
Sbjct: 214 QKSGNMVC--SSSWDCTINLWNT 234
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +1
Query: 394 VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLNLTERAYCADVEYPM 573
+ H V + W P + + ++SWD +++ WD T S+ L + DV
Sbjct: 268 LVGHTQCVSSVVW---PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGES 324
Query: 574 AVVGTAXRXHLXVHXWRXSPPXSTA 648
+ + A + W P ++A
Sbjct: 325 SALIAAGGSDPILRVWDPRKPGTSA 349
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 53.2 bits (122), Expect = 2e-07
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 9/161 (5%)
Frame = +1
Query: 61 KSTMFGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTL-----HTFLIAGSWDCQV 225
+ST G +S N E S + V++L V+ H + + SWD V
Sbjct: 236 ESTSEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSV 295
Query: 226 RCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQT----MQ 393
R W+VET GK +DV + + +D ++ WD T Q
Sbjct: 296 RRWDVET-GKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPGTSAPVFQ 353
Query: 394 VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVP 516
++H + + C W K+ ++ L++ S+D + WD RTA P
Sbjct: 354 FSSHSSWISACKWHKS-SWFHLLSASYDGKIMLWDLRTAWP 393
Score = 33.9 bits (74), Expect = 0.14
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Frame = +1
Query: 106 PNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD 285
P K+ E S DD VSA+ S P F++ G +D R W S + +
Sbjct: 100 PRKEEEPSLH-DDWVSAVNGSSPR-----FILTGCYDGLGRVWSSAGSCSHILEGHSGAI 153
Query: 286 GPVLDVAWHDDGT-KVFMASTDESVKCWDL----AANQTMQVAA------HDAPVKTCHW 432
V V +D T V AS D +++ + + + T +V A H A V++
Sbjct: 154 SSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSA 213
Query: 433 IKAPNYTCLMTTSWDKTLKFWDT 501
K+ N C ++SWD T+ W+T
Sbjct: 214 QKSGNMVC--SSSWDCTINLWNT 234
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +1
Query: 394 VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLNLTERAYCADVEYPM 573
+ H V + W P + + ++SWD +++ WD T S+ L + DV
Sbjct: 268 LVGHTQCVSSVVW---PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGES 324
Query: 574 AVVGTAXRXHLXVHXWRXSPPXSTA 648
+ + A + W P ++A
Sbjct: 325 SALIAAGGSDPILRVWDPRKPGTSA 349
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 53.2 bits (122), Expect = 2e-07
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Frame = +1
Query: 151 SALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKV 330
SA+EF P FL +GS D +R W+ G + + + DG V
Sbjct: 53 SAVEFHP----FGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRG--ISTIEFSPDGRWV 106
Query: 331 FMASTDESVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 507
D VK WDL A + + + H+ P+++ + P L T S D+T+KFWD T
Sbjct: 107 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF--HPLEFLLATGSADRTVKFWDLET 164
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 52.8 bits (121), Expect = 3e-07
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = +1
Query: 151 SALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKV 330
SA+EF P FL +GS D ++ W++ G + + + + + DG V
Sbjct: 104 SAVEFHP----FGEFLASGSSDANLKIWDIRKKGCI--QTYKGHSRGISTIRFTPDGRWV 157
Query: 331 FMASTDESVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 507
D VK WDL A + + + H+ P+++ + P L T S D+T+KFWD T
Sbjct: 158 VSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDF--HPLEFLLATGSADRTVKFWDLET 215
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 52.4 bits (120), Expect = 4e-07
Identities = 34/128 (26%), Positives = 56/128 (43%)
Frame = +1
Query: 187 HTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCW 366
HT++ + D QV+CW++E K + + G V +A H V D + W
Sbjct: 224 HTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLHG-VYCLALHPTLDVVLTGGRDSVCRVW 281
Query: 367 DLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLNLTERA 546
D+ + V HD+ V + + P ++T S D T+KFWD R T+ ++
Sbjct: 282 DIRTKMQIFVLPHDSDVFSV--LARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKT 339
Query: 547 YCADVEYP 570
A +P
Sbjct: 340 VRAMALHP 347
Score = 41.5 bits (93), Expect = 7e-04
Identities = 29/108 (26%), Positives = 45/108 (41%)
Frame = +1
Query: 205 GSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQ 384
GS D ++ W+V T + G V +A + T +F A D+ VKCWDL N+
Sbjct: 188 GSADRTIKIWDVATGVLKLTLTGHI--GQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 245
Query: 385 TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTL 528
++ C + P ++T D + WD RT + L
Sbjct: 246 VIRSYHGHLHGVYCLALH-PTLDVVLTGGRDSVCRVWDIRTKMQIFVL 292
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 442 PNYTCLMTTSWDKTLKFWDTRTAVPSMTL 528
P+ T S D+T+K WD T V +TL
Sbjct: 180 PSNEWFCTGSADRTIKIWDVATGVLKLTL 208
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 52.4 bits (120), Expect = 4e-07
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 327
V ++F+P T + +GS D ++ W V K + +LD+ W DG++
Sbjct: 56 VYTMKFNPAG----TLIASGSHDREIFLWRVHGDCKNF-MVLKGHKNAILDLHWTSDGSQ 110
Query: 328 VFMASTDESVKCWDL-AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 504
+ AS D++V+ WD+ Q ++A H + V +C + +++ S D T K WD R
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRR-GPPLIISGSDDGTAKLWDMR 169
Score = 45.2 bits (102), Expect = 6e-05
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSG--KTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWD 369
+I+GS D + W++ G +T P Q + V++ D K+F D VK WD
Sbjct: 154 IISGSDDGTAKLWDMRQRGAIQTFPDKYQ-----ITAVSFSDAADKIFTGGVDNDVKVWD 208
Query: 370 LAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVP 516
L + TM + H + +P+ + L+T D L WD R P
Sbjct: 209 LRKGEATMTLEGHQDTITGMS--LSPDGSYLLTNGMDNKLCVWDMRPYAP 256
Score = 38.3 bits (85), Expect = 0.007
Identities = 28/111 (25%), Positives = 44/111 (39%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLA 375
+++ S D VR W+VET GK + K A+ + S D + K WD+
Sbjct: 111 IVSASPDKTVRAWDVET-GKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMR 169
Query: 376 ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTL 528
+Q + + A + + T D +K WD R +MTL
Sbjct: 170 QRGAIQTFPDKYQITAVSFSDAADK--IFTGGVDNDVKVWDLRKGEATMTL 218
Score = 37.9 bits (84), Expect = 0.009
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Frame = +1
Query: 142 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSG------KTVPKAAQPMDGPVLDV 303
DT++ + SP ++L+ D ++ W++ K + +L
Sbjct: 223 DTITGMSLSPDG----SYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKC 278
Query: 304 AWHDDGTKVFMASTDESVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDK 480
+W DGTKV S+D V WD + +T+ ++ H V C + P + + S DK
Sbjct: 279 SWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNEC--VFHPTEPIIGSCSSDK 336
Query: 481 TL 486
+
Sbjct: 337 NI 338
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 52.4 bits (120), Expect = 4e-07
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
F I+GS DC V+ W+ G + + G V ++ D K+ S D SV WD
Sbjct: 869 FFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAIS--SDRGKIVSGSDDLSVIVWDK 926
Query: 373 AANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 507
Q + ++ HD+ V +C +K + ++T + D T+K WD RT
Sbjct: 927 QTTQLLEELKGHDSQV-SC--VKMLSGERVLTAAHDGTVKMWDVRT 969
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 51.6 bits (118), Expect = 7e-07
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Frame = +1
Query: 187 HTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCW 366
HT++ + D QV+CW++E + K + + G V +A H + D + W
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQN-KVIRSYHGHLSG-VYCLALHPTLDVLLTGGRDSVCRVW 287
Query: 367 DLAAN-QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLNLTER 543
D+ Q ++ HD V C P ++T S D T+KFWD R TL ++
Sbjct: 288 DIRTKMQIFALSGHDNTV--CSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKK 345
Query: 544 AYCADVEYP 570
+ A +P
Sbjct: 346 SVRAMTLHP 354
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/117 (25%), Positives = 48/117 (41%)
Frame = +1
Query: 205 GSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQ 384
GS D ++ W+V T + V +A + T +F A D+ VKCWDL N+
Sbjct: 194 GSADRTIKIWDVATGVLKLTLTGHIEQ--VRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 251
Query: 385 TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLNLTERAYCA 555
++ C + P L+T D + WD RT + L+ + C+
Sbjct: 252 VIRSYHGHLSGVYCLALH-PTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCS 307
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 442 PNYTCLMTTSWDKTLKFWDTRTAVPSMTL 528
P+ T S D+T+K WD T V +TL
Sbjct: 186 PSNEWFCTGSADRTIKIWDVATGVLKLTL 214
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 50.0 bits (114), Expect = 2e-06
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Frame = +1
Query: 106 PNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD 285
P + V S VSA+ F P H L AG DC+V+ W+V SGK + +
Sbjct: 271 PKRLVHTWSGHTKGVSAIRFFPKQG--HLLLSAGM-DCKVKIWDVYNSGKCM-RTYMGHA 326
Query: 286 GPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKA----PNYT 453
V D+ + +DG+K A D+++K WD +T QV + + K + +K
Sbjct: 327 KAVRDICFSNDGSKFLTAGYDKNIKYWD---TETGQVISTFSTGKIPYVVKLNPDDDKQN 383
Query: 454 CLMTTSWDKTLKFWDTRT 507
L+ DK + WD T
Sbjct: 384 ILLAGMSDKKIVQWDINT 401
Score = 29.1 bits (62), Expect = 4.0
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Frame = +1
Query: 166 SPPSVTLH---TFLIAGSWDCQVRCWEVETSGKTVPK---AAQPMDGPVLDVAWHDDGTK 327
S PS+++H +L A S D Q+ + + K A + G V + DG
Sbjct: 457 SMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR- 515
Query: 328 VFMASTDESVKCW--DLAANQTMQ-VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
F+ S D KCW D + + + + H+ W + + T WD +K+WD
Sbjct: 516 -FVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQ-SKVATCGWDGLIKYWD 573
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
F ++GSWD ++R W++ T D VL VA+ D ++ AS D ++K W+
Sbjct: 77 FALSGSWDGELRLWDLAAGVSTRRFVGHTKD--VLSVAFSLDNRQIVSASRDRTIKLWNT 134
Query: 373 AANQTMQVA----AHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
++ H V + +++ SWDKT+K W+
Sbjct: 135 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 180
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 2/147 (1%)
Frame = +1
Query: 142 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDG 321
D VS + FSP TL +++ SWD V+ W + S + G V VA DG
Sbjct: 151 DWVSCVRFSPN--TLQPTIVSASWDKTVKVWNL--SNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 322 TKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD- 498
+ D V WDLA + + ++ + + + C T + +K WD
Sbjct: 207 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT---EHGIKIWDL 263
Query: 499 -TRTAVPSMTLNLTERAYCADVEYPMA 576
+++ V + ++L A AD P A
Sbjct: 264 ESKSIVEDLKVDLKAEAEKADNSGPAA 290
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP---VLDVAWHDDGTKVFMASTDESVKCW 366
+++ S D + W++ K A + + G V DV DG S D ++ W
Sbjct: 31 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 367 DLAAN-QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 501
DLAA T + H V + + + + +++ S D+T+K W+T
Sbjct: 91 DLAAGVSTRRFVGHTKDVLSVAF--SLDNRQIVSASRDRTIKLWNT 134
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 48.0 bits (109), Expect = 8e-06
Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 15/175 (8%)
Frame = +1
Query: 25 KQICNE*IVGL*KSTMFGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIA 204
K+I + G + + S S+ PN DV + V A +SP + + L +
Sbjct: 227 KEIAGDGSTGAEPMDIVMTPTSQTSHIPNSDVRILEGHTSEVCACAWSPSA----SLLAS 282
Query: 205 GSWDCQVRCWEV-ETSGKTVPKA--------------AQPMDGPVLDVAWHDDGTKVFMA 339
GS D R W + E S K V + V + W+ +GT +
Sbjct: 283 GSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEKSKDVTTLDWNGEGTLLATG 342
Query: 340 STDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 504
S D + W L ++ H P+ + W K +Y L+T S D+T WD +
Sbjct: 343 SCDGQARIWTLNGELISTLSKHKGPIFSLKWNKKGDY--LLTGSVDRTAVVWDVK 395
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Frame = +1
Query: 190 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWD 369
T L GS D Q R W + +G+ + ++ GP+ + W+ G + S D + WD
Sbjct: 337 TLLATGSCDGQARIWTL--NGELISTLSKHK-GPIFSLKWNKKGDYLLTGSVDRTAVVWD 393
Query: 370 LAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTA 510
+ A + Q H P W ++ T S K +TR A
Sbjct: 394 VKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPA 441
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Frame = +1
Query: 250 GKTVP-KAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTM-QVAAHDAPVKT 423
G+T P K G V V W G+ + S D + K W++ + + + H + T
Sbjct: 436 GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYT 495
Query: 424 CHW------IKAPN-YTCLMTTSWDKTLKFWD 498
W PN L + S+D T+K WD
Sbjct: 496 IRWSPTGPGTNNPNKQLTLASASFDSTVKLWD 527
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLA 375
L + S+D V+ W+ E GK + + PV +A+ +G + S D+S+ W +
Sbjct: 514 LASASFDSTVKLWDAEL-GKMLCSFNGHRE-PVYSLAFSPNGEYIASGSLDKSIHIWSIK 571
Query: 376 ANQTMQVAAHDAPVKTCHWIKAPN 447
+ ++ + + W K N
Sbjct: 572 EGKIVKTYTGNGGIFEVCWNKEGN 595
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 48.0 bits (109), Expect = 8e-06
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
F +GS D ++ W++ G VL + DG + D VK WDL
Sbjct: 208 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFTPDGRWIVSGGEDNVVKVWDL 265
Query: 373 AANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 507
A + + + +H+ +++ + P+ L T S DKT+KFWD T
Sbjct: 266 TAGKLLHEFKSHEGKIQSLDF--HPHEFLLATGSADKTVKFWDLET 309
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/118 (26%), Positives = 55/118 (46%)
Frame = +1
Query: 157 LEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFM 336
+ F+P S +++GS+D VR W+V T+GK + K PV V ++ DG+ +
Sbjct: 119 VNFNPQS----NMIVSGSFDETVRIWDV-TTGKCL-KVLPAHSDPVTAVDFNRDGSLIVS 172
Query: 337 ASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTA 510
+S D + WD ++ D +PN ++ + D TL+ W+ +A
Sbjct: 173 SSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSA 230
Score = 44.8 bits (101), Expect = 7e-05
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Frame = +1
Query: 88 STGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPK 267
+T S P + + + VS+++FS L + S D +R + + T + +
Sbjct: 7 ATASFTPYVHSQTLTSHNRAVSSVKFSSDG----RLLASASADKTIRTYTINTINDPIAE 62
Query: 268 AAQPMDGP---VLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIK 438
Q G + DVA+ D + AS D+++K WD+ ++ C
Sbjct: 63 PVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFN 122
Query: 439 APNYTCLMTTSWDKTLKFWDTRT 507
P +++ S+D+T++ WD T
Sbjct: 123 -PQSNMIVSGSFDETVRIWDVTT 144
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
F+++ S D ++ W+VET ++ K V ++ + S DE+V+ WD+
Sbjct: 85 FIVSASDDKTLKLWDVETG--SLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDV 142
Query: 373 AANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 507
+ ++V AH PV + + + + ++++S+D + WD+ T
Sbjct: 143 TTGKCLKVLPAHSDPVTAVDFNR--DGSLIVSSSYDGLCRIWDSGT 186
Score = 31.5 bits (68), Expect = 0.75
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCW------DLAANQTMQVAAHDAPVKTCHWIKAPNYT 453
V V + DG + AS D++++ + D A + H+ + + +
Sbjct: 27 VSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARF- 85
Query: 454 CLMTTSWDKTLKFWDTRTAVPSMTL-NLTERAYCAD 558
+++ S DKTLK WD T TL T A+C +
Sbjct: 86 -IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVN 120
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 45.6 bits (103), Expect(2) = 1e-05
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 310 HDDGTK-VFMASTDESVKCWDLAANQTMQVAAH-DAPVKTCHWIKAPNYTCLMTTSWDKT 483
H G K ++ S D SV +DL + + V H +PV+ C+W P Y L+++SWD
Sbjct: 409 HSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNW--HPYYPTLISSSWDGD 466
Query: 484 LKFWD 498
L W+
Sbjct: 467 LVKWE 471
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQ-TMQVAAHDAPVKT-CHWIKAPNYTCLMT 465
+ V + DG +V S+D+S+ +DL AN+ +++ AH + V T C ++ N +++
Sbjct: 232 IFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGN--LILS 289
Query: 466 TSWDKTLKFWDTR 504
S D K WD R
Sbjct: 290 GSDDNLCKVWDRR 302
Score = 21.0 bits (42), Expect(2) = 1e-05
Identities = 8/45 (17%), Positives = 18/45 (40%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 327
+ I+ D ++ W++ + P + + D W D T+
Sbjct: 332 YFISNGKDQTIKLWDIRKMSSSAPARHEVLRNYEWDYRWMDYPTE 376
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
F +GS D ++ W++ G VL + DG V D VK WDL
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFTPDGRWVVSGGEDNIVKVWDL 172
Query: 373 AANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 507
A + + + +H+ +++ + P+ L T S D+T+KFWD T
Sbjct: 173 TAGKLLTEFKSHEGQIQSLDF--HPHEFLLATGSADRTVKFWDLET 216
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
F +GS D ++ W++ G VL + DG V D VK WDL
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFTPDGRWVVSGGEDNIVKVWDL 172
Query: 373 AANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 507
A + + + +H+ +++ + P+ L T S D+T+KFWD T
Sbjct: 173 TAGKLLTEFKSHEGQIQSLDF--HPHEFLLATGSADRTVKFWDLET 216
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +1
Query: 142 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDG 321
DT++AL SP L + Q+R W++ET K + ++ + +GPV+ +A H G
Sbjct: 61 DTLTALALSPDD----KLLFSAGHSRQIRVWDLETL-KCI-RSWKGHEGPVMGMACHASG 114
Query: 322 TKVFMASTDESVKCWDLAAN-QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
+ A D V WD+ T H V + + N L++ S D T++ WD
Sbjct: 115 GLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWD 174
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD---GPVLDVAWHDD 318
VS++ F P S LI+GS D VR W++ T K M+ V +A +D
Sbjct: 147 VSSILFHPDSNK--NILISGSDDATVRVWDLNAKN-TEKKCLAIMEKHFSAVTSIALSED 203
Query: 319 GTKVFMASTDESVKCWDL 372
G +F A D+ V WDL
Sbjct: 204 GLTLFSAGRDKVVNLWDL 221
Score = 27.9 bits (59), Expect = 9.2
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 9/111 (8%)
Frame = +1
Query: 190 TFLIAGSWDCQVRCWEV----ETSGKTVPKAAQPM----DGPVLDVAWHDDGTKVFMAST 345
+F ++GS D ++ W + E S + + + + D + VA + + V S
Sbjct: 460 SFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSE 519
Query: 346 DESVKCWDLA-ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
D + W L + + H + + + C+MT S DKT+K W
Sbjct: 520 DRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQ--CVMTASGDKTVKIW 568
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 45.2 bits (102), Expect = 6e-05
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLA 375
L++GS D + WE S K K V V + DG + AS D+SV+ W+
Sbjct: 332 LVSGSDDFTMFLWEPSVS-KQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGI 390
Query: 376 ANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 507
Q + V H PV W + + L++ S D TLK W+ RT
Sbjct: 391 TGQFVTVFRGHVGPVYQVSW--SADSRLLLSGSKDSTLKIWEIRT 433
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
++ + S+D VR W T G+ V + GPV V+W D + S D ++K W++
Sbjct: 374 WIASASFDKSVRLWNGIT-GQFVTVFRGHV-GPVYQVSWSADSRLLLSGSKDSTLKIWEI 431
Query: 373 AANQTMQ-VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
+ Q + H V W +P+ +++ D+ LK W
Sbjct: 432 RTKKLKQDLPGHADEVFAVDW--SPDGEKVVSGGKDRVLKLW 471
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +1
Query: 142 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDG 321
+ V + FSP L +GS D VR W++ T +T + VL VAW DG
Sbjct: 110 EAVLCVSFSPDGKQL----ASGSGDTTVRLWDLYT--ETPLFTCKGHKNWVLTVAWSPDG 163
Query: 322 TKVFMASTDESVKCWD 369
+ S + CW+
Sbjct: 164 KHLVSGSKSGEICCWN 179
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 45.2 bits (102), Expect = 6e-05
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 8/143 (5%)
Frame = +1
Query: 97 SNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGK-TVPKAA 273
S N + E+ S D + S + L A D VR + + K T ++
Sbjct: 135 SEKSNDEEEIGSEEDGSDSDEFHEKSEEEIDRILAAACDDGCVRLYRISNLEKLTYYRSL 194
Query: 274 QPMDGPVLDVAWHDDGTKVFMASTDESVKCWD-LAANQTMQVAAH----DAPVKTCHWIK 438
+ G L V W D ++F S+D ++CWD + ++ ++ A + + C W
Sbjct: 195 PRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVW-S 253
Query: 439 APNYTCLMTTSWDK--TLKFWDT 501
+ C + S D T++FWD+
Sbjct: 254 LLSLRCSVLVSGDSTGTVQFWDS 276
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 44.4 bits (100), Expect = 1e-04
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFM-ASTDESVKCWD 369
++++ S D ++ W+ E +G + + V+ V ++ T F AS D ++K W+
Sbjct: 113 YVLSSSDDMLIKLWDWE-NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN 171
Query: 370 LAA-NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLN---LT 537
L + + + AH V + + L+T S D T K WD +T TL+
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHN 231
Query: 538 ERAYCADVEYPMAVVGT 588
A C E P+ + G+
Sbjct: 232 VSAVCFHPELPIIITGS 248
Score = 30.3 bits (65), Expect = 1.7
Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 3/131 (2%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 327
V + F+P +TF A S D ++ W + + A +D D
Sbjct: 145 VMQVVFNPKDT--NTFASA-SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY 201
Query: 328 VFMASTDESVKCWDLAAN---QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
+ S D + K WD QT+ H+ H P ++T S D T++ W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH----PELPIIITGSEDGTVRIWH 257
Query: 499 TRTAVPSMTLN 531
T TLN
Sbjct: 258 ATTYRLENTLN 268
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 44.4 bits (100), Expect = 1e-04
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFM-ASTDESVKCWD 369
++++ S D ++ W+ E +G + + V+ V ++ T F AS D ++K W+
Sbjct: 113 YVLSSSDDMLIKLWDWE-NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN 171
Query: 370 LAA-NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLN---LT 537
L + + + AH V + + L+T S D T K WD +T TL+
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHN 231
Query: 538 ERAYCADVEYPMAVVGT 588
A C E P+ + G+
Sbjct: 232 VSAVCFHPELPIIITGS 248
Score = 30.3 bits (65), Expect = 1.7
Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 3/131 (2%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 327
V + F+P +TF A S D ++ W + + A +D D
Sbjct: 145 VMQVVFNPKDT--NTFASA-SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY 201
Query: 328 VFMASTDESVKCWDLAAN---QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
+ S D + K WD QT+ H+ H P ++T S D T++ W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH----PELPIIITGSEDGTVRIWH 257
Query: 499 TRTAVPSMTLN 531
T TLN
Sbjct: 258 ATTYRLENTLN 268
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 44.4 bits (100), Expect = 1e-04
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFM-ASTDESVKCWD 369
++++ S D ++ W+ E +G + + V+ V ++ T F AS D ++K W+
Sbjct: 113 YVLSSSDDMLIKLWDWE-NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN 171
Query: 370 LAA-NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLN---LT 537
L + + + AH V + + L+T S D T K WD +T TL+
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHN 231
Query: 538 ERAYCADVEYPMAVVGT 588
A C E P+ + G+
Sbjct: 232 VSAVCFHPELPIIITGS 248
Score = 30.3 bits (65), Expect = 1.7
Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 3/131 (2%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 327
V + F+P +TF A S D ++ W + + A +D D
Sbjct: 145 VMQVVFNPKDT--NTFASA-SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY 201
Query: 328 VFMASTDESVKCWDLAAN---QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
+ S D + K WD QT+ H+ H P ++T S D T++ W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH----PELPIIITGSEDGTVRIWH 257
Query: 499 TRTAVPSMTLN 531
T TLN
Sbjct: 258 ATTYRLENTLN 268
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPM------DGPVLDVAWHDDGTKVFMASTDE- 351
+L++GS D ++ W+V S K PM + DVAWH +F ++ D+
Sbjct: 184 YLLSGSQDQRICLWDV--SATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDC 241
Query: 352 SVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 504
+ WDL NQ QV H+ + + N L T S D T+ +D R
Sbjct: 242 QLVIWDLRTNQMQHQVKVHEREINYLSF-NPFNEWVLATASSDSTVALFDLR 292
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFM-ASTDESVKCWD 369
++++ S D ++ W+ E G + + V+ V ++ T F AS D ++K W+
Sbjct: 113 YVLSSSDDMLIKLWDWE-KGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
Query: 370 LAA-NQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTL---NLT 537
L + + + AH V + + L+T S D T K WD +T TL
Sbjct: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN 231
Query: 538 ERAYCADVEYPMAVVGT 588
A C E P+ + G+
Sbjct: 232 VSAVCFHPELPIIITGS 248
Score = 33.9 bits (74), Expect = 0.14
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 5/127 (3%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
+++AG+ D +R + T K K + + VA H V +S D +K WD
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKV--KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 373 ----AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLNLTE 540
A Q + +H T + + S D+T+K W+ + P+ TL+ +
Sbjct: 129 EKGWACTQIFEGHSHYVMQVT---FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
Query: 541 RAY-CAD 558
+ C D
Sbjct: 186 KGVNCVD 192
Score = 31.5 bits (68), Expect = 0.75
Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 3/131 (2%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 327
V + F+P +TF A S D ++ W + + A +D D
Sbjct: 145 VMQVTFNPKDT--NTFASA-SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY 201
Query: 328 VFMASTDESVKCWDLAAN---QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
+ S D + K WD QT++ H+ H P ++T S D T++ W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH----PELPIIITGSEDGTVRIWH 257
Query: 499 TRTAVPSMTLN 531
T TLN
Sbjct: 258 ATTYRLENTLN 268
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Frame = +1
Query: 85 ISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGK-TV 261
I G + D E S +D E L L A D VR + + S K T
Sbjct: 131 IQNGYLSEKSDDEEESGVEDDSELDELDEKVEALDRHLAAACDDGCVRIYYISESDKLTY 190
Query: 262 PKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL-----AANQTMQVAAHDAPVKTC 426
++ + G L V W D ++F S+D ++CWD T+ + + C
Sbjct: 191 YRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCWDANLCHEVYRITVGLGGLGNGSELC 250
Query: 427 HW-IKAPNYTCLMTTSWDKTLKFWDTR 504
W + + Y L++ +++FWD++
Sbjct: 251 IWSLLSLRYGVLVSGDSTGSVQFWDSQ 277
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 42.7 bits (96), Expect = 3e-04
Identities = 31/101 (30%), Positives = 45/101 (44%)
Frame = +1
Query: 67 TMFGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVET 246
T+ +I S + ++ S + V L FSP L L + SWD VR W+V
Sbjct: 453 TLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSP----LTQLLASSSWDYTVRLWDVFA 508
Query: 247 SGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWD 369
S TV D VL VA+ DG ++ ++ D + WD
Sbjct: 509 SKGTVETFRHNHD--VLTVAFRPDGKQLASSTLDGQINFWD 547
Score = 34.7 bits (76), Expect = 0.080
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = +1
Query: 142 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDG 321
+ V+AL F + H+ L++ S D VR W+ + K P + + G
Sbjct: 392 NAVTALHFMADN---HS-LLSASLDGTVRAWDFKRY-KNYKTYTTPTPRQFVSLTADPSG 446
Query: 322 TKVFMASTDE-SVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
V + D + W Q + + H+APV + +P L ++SWD T++ W
Sbjct: 447 DVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMF--SPLTQLLASSSWDYTVRLW 504
Query: 496 D 498
D
Sbjct: 505 D 505
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 42.7 bits (96), Expect = 3e-04
Identities = 31/101 (30%), Positives = 45/101 (44%)
Frame = +1
Query: 67 TMFGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVET 246
T+ +I S + ++ S + V L FSP L L + SWD VR W+V
Sbjct: 493 TLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSP----LTQLLASSSWDYTVRLWDVFA 548
Query: 247 SGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWD 369
S TV D VL VA+ DG ++ ++ D + WD
Sbjct: 549 SKGTVETFRHNHD--VLTVAFRPDGKQLASSTLDGQINFWD 587
Score = 34.7 bits (76), Expect = 0.080
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = +1
Query: 142 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDG 321
+ V+AL F + H+ L++ S D VR W+ + K P + + G
Sbjct: 432 NAVTALHFMADN---HS-LLSASLDGTVRAWDFKRY-KNYKTYTTPTPRQFVSLTADPSG 486
Query: 322 TKVFMASTDE-SVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
V + D + W Q + + H+APV + +P L ++SWD T++ W
Sbjct: 487 DVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMF--SPLTQLLASSSWDYTVRLW 544
Query: 496 D 498
D
Sbjct: 545 D 545
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 42.3 bits (95), Expect = 4e-04
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
Frame = +1
Query: 175 SVTLH---TFLIAGSWDCQVRCWEVET---SGKTVPKAAQPMDGPVLDVAWHDDGTKVFM 336
+V LH T LI+G + +R W++ S + VP+ P+ L V W DGT V
Sbjct: 130 TVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRS--LTVMW--DGTMVVA 185
Query: 337 ASTDESVKCW-DLAANQTM-------QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKF 492
A+ + W L QTM ++ AH++ + C + +P L T S DKT+K
Sbjct: 186 ANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKC--LLSPGNKYLATASSDKTVKI 243
Query: 493 WD 498
W+
Sbjct: 244 WN 245
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTS 471
V+ V + G ++ S D SVK WDL + + +PV T + PN T L++
Sbjct: 87 VMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPVNTV--VLHPNQTELISGD 144
Query: 472 WDKTLKFWDTRTAVPSMTL 528
+ ++ WD R + S L
Sbjct: 145 QNGNIRVWDLRADLCSCEL 163
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAAN-----QTMQVAAHDAPVKTCHWIKAPNYTC 456
V VAW+ +GTK+ S D++ + W++ + + +++ H V W P ++
Sbjct: 23 VHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCW--DPKHSD 80
Query: 457 LM-TTSWDKTLKFWDTRTAVPSMTLNLT 537
L+ T S DK+++ WD R+ + + L+
Sbjct: 81 LVATASGDKSVRLWDARSGKCTQQVELS 108
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPK-AAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWD 369
+L S DC W+V K K + PV V+W D TK+ E +K WD
Sbjct: 238 YLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWD 297
Query: 370 LAANQTMQVAAHD---APVKTCHWIKAPNYTCLMTTSWD--KTLKFWDT 501
+ ++ V +C W P+ T L+ S D + + WDT
Sbjct: 298 VDTGVLRHTFGNNNTGFTVSSCAWF--PDSTRLVCGSSDPERGIVMWDT 344
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 316 DGTKVFMASTDESVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKF 492
D + + S D V W+L + ++V + H V W N L + S D+T++
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSW-NPKNPRMLASASDDQTIRI 512
Query: 493 W 495
W
Sbjct: 513 W 513
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/71 (29%), Positives = 38/71 (53%)
Frame = +1
Query: 286 GPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMT 465
G VLD++W D + AS D++V+ W + +N + V AH++ V + + N M+
Sbjct: 329 GEVLDISWSKDNY-LLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQF-NPVNENYFMS 386
Query: 466 TSWDKTLKFWD 498
S D ++ W+
Sbjct: 387 GSIDGKVRIWN 397
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLA 375
L G D V+ W+ T+ T+ K+ G +LD+A D V A++ ++ WD++
Sbjct: 246 LFTGGQDRAVKMWD--TNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVS 303
Query: 376 ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLNLTE--RAY 549
+ + + + +++ ++D+T+K WD + T+ T A
Sbjct: 304 SGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAI 363
Query: 550 CADVE 564
C ++
Sbjct: 364 CLSID 368
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = +1
Query: 145 TVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGT 324
TV + +SP L T S+D W+ S + + V V+W+ G+
Sbjct: 76 TVRSCAWSPSGQLLAT----ASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGS 131
Query: 325 KVFMASTDESVKCWDLAANQTMQVAA----HDAPVKTCHWIKAPNYTCLMTTSWDKTLKF 492
+ S D+SV W++ AA H VK W P L + S+D T+K
Sbjct: 132 CLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQW--HPTMDVLFSCSYDNTIKV 189
Query: 493 W 495
W
Sbjct: 190 W 190
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKT---VPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCW 366
L + S D VR WE + ++ + V AW G + AS D + W
Sbjct: 42 LASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIW 101
Query: 367 DLAANQTMQVAA---HDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
++ ++ H+ VK+ W + + CL T S DK++ W+
Sbjct: 102 KNYGSEFECISTLEGHENEVKSVSWNASGS--CLATCSRDKSVWIWE 146
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 39.5 bits (88), Expect = 0.003
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVET--SGKTV--PKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKC 363
++ S D +R W+V S V PK A+P PV AW DG ++ D S++
Sbjct: 294 VLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQI 353
Query: 364 WDL----AANQTMQVA-AHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 504
W L + + V AH + + + + + L++ S+D +LK WD R
Sbjct: 354 WSLKPGWGSRPDIYVGKAHTDDITSVKF--SSDGRILLSRSFDGSLKVWDLR 403
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLA 375
++A + D V W+ T + GPV + W DG V + + V+ WD A
Sbjct: 153 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 212
Query: 376 ANQTMQV--AAHDAPVKTCHW 432
+N+ ++ H + V + W
Sbjct: 213 SNRQLRTLKGGHQSRVGSLAW 233
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWD---LAANQTMQ----VAAHDAPVKTCHWIKAPNY 450
V + W G ++ D V WD ++N T Q + H + VK W P
Sbjct: 269 VCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW--CPFQ 326
Query: 451 TCLMTTSW---DKTLKFWDTRT 507
L+ T D+T+KFW+T T
Sbjct: 327 ANLLATGGGGGDRTIKFWNTHT 348
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLA 375
++A + D V W+ T + GPV + W DG V + + V+ WD A
Sbjct: 143 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 202
Query: 376 ANQTMQV--AAHDAPVKTCHW 432
+N+ ++ H + V + W
Sbjct: 203 SNRQLRTLKGGHQSRVGSLAW 223
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWD---LAANQTMQ----VAAHDAPVKTCHWIKAPNY 450
V + W G ++ D V WD ++N T Q + H + VK W P
Sbjct: 259 VCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW--CPFQ 316
Query: 451 TCLMTTSW---DKTLKFWDTRT 507
L+ T D+T+KFW+T T
Sbjct: 317 ANLLATGGGGGDRTIKFWNTHT 338
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +1
Query: 286 GPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMT 465
G +LD++W + G + +S DE+V+ W + ++ ++ H+ V TC + ++
Sbjct: 323 GEILDLSWSEKGY-LLSSSVDETVRLWRVGCDECLRTFTHNNFV-TCVAFNPVDDNYFIS 380
Query: 466 TSWDKTLKFWD-TRTAVPSMT-LNLTERAYCADVEYPMAVVGT 588
S D ++ WD TR V T + A C + AV+G+
Sbjct: 381 GSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGS 423
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +1
Query: 286 GPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMT 465
G +LD++W + G + +S DE+V+ W + ++ ++ H+ V TC + ++
Sbjct: 323 GEILDLSWSEKGY-LLSSSVDETVRLWRVGCDECLRTFTHNNFV-TCVAFNPVDDNYFIS 380
Query: 466 TSWDKTLKFWD-TRTAVPSMT-LNLTERAYCADVEYPMAVVGT 588
S D ++ WD TR V T + A C + AV+G+
Sbjct: 381 GSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGS 423
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Frame = +1
Query: 205 GSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQ 384
GS+D WE + + + V V+W+ G+ + D+SV W++ +
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEE 125
Query: 385 -----TMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
T+ V H VK W P L + S+D T+K W
Sbjct: 126 DDEFDTIAVLTGHSEDVKMVLW--HPTMDVLFSCSYDNTIKIW 166
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 37.5 bits (83), Expect = 0.011
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVP-KAAQPMDGPVLDVA-WHDDGTKVFMASTDESVKCWD 369
L AG+ + W+ T ++ P K ++G +V + G ++ S D+++K WD
Sbjct: 225 LFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWD 284
Query: 370 LAANQT-MQVAAHDAPVKTCH-WIKAPNYTCLMTTSWDKTLKFW 495
L Q M + H V + W K CL+++S D T+K W
Sbjct: 285 LNTLQCIMTLKQHTGTVTSLLCWDK-----CLISSSLDGTIKVW 323
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 280 MDGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQV-AAHDAPVKTCHWIKAPNYTC 456
M G + DV WH + + S+D++V+ WD+ + +++ H + V + +P+
Sbjct: 498 MAGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSL--AMSPDGRY 555
Query: 457 LMTTSWDKTLKFWDTRTA 510
+ + D T+ WD TA
Sbjct: 556 MASGDEDGTIMMWDLSTA 573
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +1
Query: 286 GPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQ-VAAHDAPVKTCHWIKAPNYTCLM 462
GPV + G V +S D +++ W N + H+ PV + +Y
Sbjct: 419 GPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHY--FA 476
Query: 463 TTSWDKTLKFW 495
+ S D+T + W
Sbjct: 477 SCSHDRTARIW 487
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 37.1 bits (82), Expect = 0.015
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = +1
Query: 154 ALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVF 333
+++FSP T ++GS DC V+ W + +++ P + + + + + F
Sbjct: 813 SVDFSPSDPTK---FVSGSDDCSVKLWSINEK-RSLGTIWSPANVCCVQFSSYSNHLLAF 868
Query: 334 MASTDESVKCWDLAANQT--MQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
S D V C+DL +T +A H+ K ++K + +++ S D +LK W+
Sbjct: 869 -GSADYKVYCYDLRYVKTPWCTLAGHE---KAVSYVKFMDSETIVSASTDNSLKLWN 921
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 316 DGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
DG + A D+ V W++ Q A + T + PN T L T+S+DKT+K W
Sbjct: 519 DGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFR-PNSTQLATSSFDKTIKIW 577
Query: 496 D 498
D
Sbjct: 578 D 578
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 316 DGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
DG + A D+ V W++ Q A + T + PN T L T+S+DKT+K W
Sbjct: 521 DGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFR-PNSTQLATSSFDKTIKIW 579
Query: 496 D 498
D
Sbjct: 580 D 580
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 316 DGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
DG + A D+ V W++ Q A + T + PN T L T+S+DKT+K W
Sbjct: 521 DGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFR-PNSTQLATSSFDKTIKIW 579
Query: 496 D 498
D
Sbjct: 580 D 580
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 316 DGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
DG + A D+ V W++ Q A + T + PN T L T+S+DKT+K W
Sbjct: 521 DGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFR-PNSTQLATSSFDKTIKIW 579
Query: 496 D 498
D
Sbjct: 580 D 580
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 316 DGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
DG + A D+ V W++ Q A + T + PN T L T+S+DKT+K W
Sbjct: 521 DGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFR-PNSTQLATSSFDKTIKIW 579
Query: 496 D 498
D
Sbjct: 580 D 580
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCLMTT 468
V V WH + + D+ VK WD + + + + H V + W + N+ L+T
Sbjct: 271 VKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNW--LLTA 328
Query: 469 SWDKTLKFWDTRT 507
S D+ +K +D RT
Sbjct: 329 SKDQIIKLYDIRT 341
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 301 VAWHDDGTKVFMASTDESVKCWD-LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWD 477
V W G ++ S W+ + N M + AHD P+++ W NY +++
Sbjct: 129 VLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENY--MVSGDDG 186
Query: 478 KTLKFW 495
TLK+W
Sbjct: 187 GTLKYW 192
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCW 366
+ ++GS D + W V + + D V D+AWH G + S D + K W
Sbjct: 367 YFVSGSSDGSICHWIVGHENPQI-EIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 36.7 bits (81), Expect = 0.020
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Frame = +1
Query: 190 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWD 369
+ L +GS D + W+V G++ + V D+ + D G K+ +S D+ ++ WD
Sbjct: 119 SMLASGSKDNDIILWDVV--GESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWD 176
Query: 370 LAANQTMQ-VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
L MQ V+ H + V + P ++T S D+ L+F+
Sbjct: 177 LETQHCMQIVSGHHSEVWSVD--TDPEERYVVTGSADQELRFY 217
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 289 PVLDVAWHDDGTKVFMASTDESVKCWDLAANQT-MQVAAHDAPVKTCHWIKAPNYTCLMT 465
PV+ + DG + S D+++K W L + AH V +++ +Y L +
Sbjct: 584 PVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHY--LFS 641
Query: 466 TSWDKTLKFWD 498
D+ +K+WD
Sbjct: 642 IGKDRLVKYWD 652
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 36.7 bits (81), Expect = 0.020
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Frame = +1
Query: 175 SVTLH---TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPV--LDVAWHDDGTKVFMA 339
+V LH T LI+G + +R W++ + + + +D V L V W DGT V A
Sbjct: 124 TVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPE-VDTAVRSLTVMW--DGTMVVAA 180
Query: 340 STDESVKCWDLA-ANQTM-------QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
+ + W L QTM ++ AH+ + C A Y L T S DKT+K W
Sbjct: 181 NNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKY--LATASSDKTVKIW 238
Query: 496 D 498
+
Sbjct: 239 N 239
Score = 31.5 bits (68), Expect = 0.75
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = +1
Query: 166 SPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMAST 345
S PSV L T S+D +R WE ET G+ + Q D V + D A+
Sbjct: 2 SQPSVILAT----ASYDHTIRFWEAET-GRCY-RTIQYPDSHVNRLEITPD-KHYLAAAC 54
Query: 346 DESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTC----LMTTSWDKTLKFWDTR 504
+ ++ +D+ +N V +D+ + A + C + + S D T+K WD R
Sbjct: 55 NPHIRLFDVNSNSPQPVMTYDSHTNN---VMAVGFQCDAKWMYSGSEDGTVKIWDLR 108
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
+L S+D R W++ T + + + V +A+ DG D + WDL
Sbjct: 353 YLGTTSYDKTWRLWDINTGAELLLQEGHSRS--VYGIAFQQDGALAASCGLDSLARVWDL 410
Query: 373 AANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 504
+++ V H PV + ++ +PN L + D + WD R
Sbjct: 411 RTGRSILVFQGHIKPVFSVNF--SPNGYHLASGGEDNQCRIWDLR 453
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/73 (24%), Positives = 28/73 (38%)
Frame = +1
Query: 283 DGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLM 462
D P+ ++ DG + S K W++ D + + +P CL
Sbjct: 255 DRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLA 314
Query: 463 TTSWDKTLKFWDT 501
T S D+T K W T
Sbjct: 315 TASADRTAKLWKT 327
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +1
Query: 337 ASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 507
AS D + K W H + + + Y L TTS+DKT + WD T
Sbjct: 316 ASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKY--LGTTSYDKTWRLWDINT 370
Score = 27.9 bits (59), Expect = 9.2
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWH-DDGTKVFMASTDESVKCWD- 369
L +G D Q R W++ A V V + +G + AS D V W
Sbjct: 438 LASGGEDNQCRIWDLRMRKSLYIIPAHA--NLVSQVKYEPQEGYFLATASYDMKVNIWSG 495
Query: 370 LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
+ +A H++ V + I A + +C+ T S D+T+K W
Sbjct: 496 RDFSLVKSLAGHESKVASLD-ITADS-SCIATVSHDRTIKLW 535
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 36.3 bits (80), Expect = 0.026
Identities = 27/134 (20%), Positives = 56/134 (41%), Gaps = 3/134 (2%)
Frame = +1
Query: 106 PNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGK-TVPKAAQPM 282
P++ ++ D V L+FS +L + S D WE+ G ++
Sbjct: 263 PSQTAQILESHTDEVWFLQFSHNG----KYLASSSKDQTAIIWEISADGHISLKHTLVGH 318
Query: 283 DGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHD--APVKTCHWIKAPNYTC 456
PV+ + W D +V +E ++ WD+ + + + +P+ +C W P+
Sbjct: 319 HKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPI-SCGWY--PDGQG 375
Query: 457 LMTTSWDKTLKFWD 498
++ D+++ WD
Sbjct: 376 IIAGMTDRSICMWD 389
Score = 31.1 bits (67), Expect = 0.99
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 223 VRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
+R W+V+ SG V + P+ W+ DG + TD S+ WDL
Sbjct: 343 IRRWDVD-SGDCVHMYEKGGISPI-SCGWYPDGQGIIAGMTDRSICMWDL 390
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 36.3 bits (80), Expect = 0.026
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAW-HDDGTKVFMASTDESVKCWD 369
+LI G ++ +R +++ P G + + W H D T + + V+ WD
Sbjct: 116 YLITGGFEKILRVFDLNRLDAP-PTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWD 174
Query: 370 LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
+ + + +Q +PV + + Y +TT+ T+KFWD
Sbjct: 175 VRSGKIVQTLETKSPVTSAEVSQDGRY---ITTADGSTVKFWD 214
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 36.3 bits (80), Expect = 0.026
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = +1
Query: 175 SVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK-VFMASTDE 351
S T + L++GS DC+V+ W + M + V ++ + + + S D
Sbjct: 472 SRTEPSMLVSGSDDCKVKVWCTRQEASVI---NIDMKANICCVKYNPGSSNYIAVGSADH 528
Query: 352 SVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMT 525
+ +DL N + + K ++K + L + S D TL+ WD + +P T
Sbjct: 529 HIHYYDL-RNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRT 585
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 35.9 bits (79), Expect = 0.035
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 PKAAQPMDGPVLDVAW-HDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIK 438
PK G + V W H D T + + ++ WD+ +++ + +PV + +
Sbjct: 133 PKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTLETKSPVTSAEVSQ 192
Query: 439 APNYTCLMTTSWDKTLKFWDTR 504
Y +TT+ ++KFWD +
Sbjct: 193 DGRY---ITTADGSSVKFWDAK 211
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 35.5 bits (78), Expect = 0.046
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 139 DDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGK--TVPKAAQPMDGPVLDVAWH 312
DD V+A+ S T++T GS D ++R W T K T+ + V +A +
Sbjct: 235 DDAVNAIAVSTNG-TVYT----GSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALN 289
Query: 313 DDGTKVFMASTDESVKCWD 369
DDG+ +F S D S+ W+
Sbjct: 290 DDGSVLFSGSCDRSILVWE 308
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 35.1 bits (77), Expect = 0.061
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 223 VRCWEVETSGKTVPKAAQPMD-GPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQ-- 393
V W+ +SG T D GPV + W DG + + + V+ WD +N+ ++
Sbjct: 145 VYLWDA-SSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTL 203
Query: 394 VAAHDAPVKTCHW 432
+ H++ V + W
Sbjct: 204 IGGHESRVGSLAW 216
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 35.1 bits (77), Expect = 0.061
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQ-TMQVAAHDAPVKTCHWIKAPNYTCLMTT 468
+ D++W + + AS D+++K WD+ N+ T + H VK+ N L++
Sbjct: 131 IFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSM-CSHPTNSDLLVSG 189
Query: 469 SWDKTLKFWDTR 504
S D WD R
Sbjct: 190 SRDGCFALWDLR 201
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 35.1 bits (77), Expect = 0.061
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 286 GPVLDVAWHDDGTKVFMASTDESVKCWDLAAN 381
G + V+W DG +V S D+S K WD++ N
Sbjct: 233 GSIYAVSWSPDGKQVLTVSADKSAKIWDISDN 264
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 35.1 bits (77), Expect = 0.061
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAW-HDDGTKVFMASTDESVKCWDL 372
L+ G ++ +R +++ P G + + W H D T + + V+ WD+
Sbjct: 117 LLTGGFEKILRVFDMNRLDAP-PTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDV 175
Query: 373 AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
+ + +Q +PV + + Y +TT+ T+KFWD
Sbjct: 176 RSGKIVQTLETKSPVTSAEVSQDGRY---ITTADGSTVKFWD 214
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 35.1 bits (77), Expect = 0.061
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAW-HDDGTKVFMASTDESVKCWDL 372
L+ G ++ +R +++ P G + + W H D T + + V+ WD+
Sbjct: 117 LLTGGFEKILRVFDMNRLDAP-PTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDV 175
Query: 373 AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
+ + +Q +PV + + Y +TT+ T+KFWD
Sbjct: 176 RSGKIVQTLETKSPVTSAEVSQDGRY---ITTADGSTVKFWD 214
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 34.7 bits (76), Expect = 0.080
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Frame = +1
Query: 286 GPVLDVAWHDDGTK--VFMASTDESVKCWD-LAANQTMQVAAHDAPVKTCHWIKAPNYTC 456
G V D+A+ + V D+++K WD + N+ H+APV + + N
Sbjct: 465 GNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQF 524
Query: 457 LMTTSWDKTLKFW-----DTRTAVPSMTLNLTERAYCAD 558
+ +T+ D +K W +R + + T AYCAD
Sbjct: 525 IFSTAVDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCAD 563
Score = 31.5 bits (68), Expect = 0.75
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
Frame = +1
Query: 226 RCWEVETSGKTVPKA-AQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTM---- 390
+ W++ T + + A V V W DG + +A + V + + +
Sbjct: 399 KVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHL 458
Query: 391 QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 507
++ AH V + + C++T DKT+K WD T
Sbjct: 459 EIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVT 497
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 34.7 bits (76), Expect = 0.080
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Frame = +1
Query: 286 GPVLDVAWHDDGTK--VFMASTDESVKCWD-LAANQTMQVAAHDAPVKTCHWIKAPNYTC 456
G V D+A+ + V D+++K WD + N+ H+APV + + N
Sbjct: 465 GNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQF 524
Query: 457 LMTTSWDKTLKFW-----DTRTAVPSMTLNLTERAYCAD 558
+ +T+ D +K W +R + + T AYCAD
Sbjct: 525 IFSTAVDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCAD 563
Score = 31.5 bits (68), Expect = 0.75
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
Frame = +1
Query: 226 RCWEVETSGKTVPKA-AQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTM---- 390
+ W++ T + + A V V W DG + +A + V + + +
Sbjct: 399 KVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHL 458
Query: 391 QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRT 507
++ AH V + + C++T DKT+K WD T
Sbjct: 459 EIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVT 497
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 34.7 bits (76), Expect = 0.080
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Frame = +1
Query: 226 RCWEVETSGKTVPKAAQPMDGPVLDV---AWHDDGTKVFMASTDESVKCWDLAANQTM-- 390
+ W++ S ++P A + PV+ V W DG+ +A + V+ + + M
Sbjct: 397 KVWDL--SKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQ 454
Query: 391 --QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMT 525
++ AH V + C++T DKT+K WD T V T
Sbjct: 455 HLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHT 501
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 34.7 bits (76), Expect = 0.080
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Frame = +1
Query: 226 RCWEVETSGKTVPKAAQPMDGPVLDV---AWHDDGTKVFMASTDESVKCWDLAANQTM-- 390
+ W++ S ++P A + PV+ V W DG+ +A + V+ + + M
Sbjct: 397 KVWDL--SKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQ 454
Query: 391 --QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMT 525
++ AH V + C++T DKT+K WD T V T
Sbjct: 455 HLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHT 501
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 313 DDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKF 492
D G + S D V +DL N + + KT ++K + + L+++S D TLK
Sbjct: 671 DSGRSLAFGSADHKVYYYDLR-NPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKL 729
Query: 493 WD 498
WD
Sbjct: 730 WD 731
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSW-DCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGT 324
V+A+++S T H L+A + D V W V ++ K +A + PV DV W G
Sbjct: 163 VTAIDWS----TSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGL 218
Query: 325 KVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 504
+ D + + +D+ Q D V + N ++ +L+ WD R
Sbjct: 219 SLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKF-HPDNCNVFLSGGSKGSLRLWDIR 277
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTS 471
VLD++W + +S D++V+ WD+ +++ AH+ V TC + ++ S
Sbjct: 522 VLDLSW-SRSQLLLSSSMDKTVRLWDIETQSCLKLFAHNDYV-TCVQFNPLDEDYFISGS 579
Query: 472 WDKTLKFWD--TRTAVPSMTLNLTERAYCADVEYPMAVVGT 588
D ++ W+ R V L A C + A VG+
Sbjct: 580 LDAKIRIWNISNRQVVEWNDLKEMVTAVCYTPDGQAAFVGS 620
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/115 (25%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Frame = +1
Query: 190 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPV----LD--VAWHDDGT-KVFMAST- 345
+ +IAGS + ++ ++++ + TV ++ G V D + H + T ++F+AS
Sbjct: 501 SMVIAGSANGSLKLYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGY 560
Query: 346 DESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLM--TTSWDKTLKFWDTR 504
+ V +D+ +QV A+ + + +K N++ + T+S+DK +K WD R
Sbjct: 561 SKDVALYDIGRGTRLQVFAN-MHQEHINVVKFSNHSPFLFATSSFDKDVKLWDLR 614
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 313 DDGT-KVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHW-IKAPNYTCLMTTSWDKTL 486
+DGT K F +S DL T+Q A D V + + I PN L T S DK++
Sbjct: 372 EDGTVKGFDIRAAQSGSDSDLNPTYTIQAHAQDRGVSSISYNISTPNL--LATGSMDKSV 429
Query: 487 KFWDTRTAVPS 519
K WD PS
Sbjct: 430 KLWDLSNNEPS 440
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +1
Query: 340 STDESVKCWDLAANQTMQVAAHDAPVKTCHWIK-APNYTCLMTTSWDK-TLKFWDT 501
S D+SVK WDL+ N+ +A H I A + L+ K L WDT
Sbjct: 424 SMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGELHVWDT 479
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/71 (21%), Positives = 32/71 (45%)
Frame = +1
Query: 283 DGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLM 462
+G + + W DG+K+ S D S + W++ + + + V+ W + + ++
Sbjct: 235 EGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRV--WDCCISDSLIV 292
Query: 463 TTSWDKTLKFW 495
T D T + W
Sbjct: 293 TAGEDCTCRVW 303
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/71 (21%), Positives = 32/71 (45%)
Frame = +1
Query: 283 DGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLM 462
+G + + W DG+K+ S D S + W++ + + + V+ W + + ++
Sbjct: 235 EGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRV--WDCCISDSLIV 292
Query: 463 TTSWDKTLKFW 495
T D T + W
Sbjct: 293 TAGEDCTCRVW 303
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 346 DESVKCWDLA-ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSM 522
D VK WD+A A + H V+ C N + L+T S+D T+K WD R +
Sbjct: 157 DGVVKYWDVAGATVISDLLGHKDYVR-CGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNW 215
Query: 523 TLNLTERAYCADVEY 567
+ DV Y
Sbjct: 216 IAEINHGLPVEDVVY 230
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 33.9 bits (74), Expect = 0.14
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
Frame = +1
Query: 226 RCWEVETSGKTVPKAAQPMDGPVLDV---AWHDDGTKVFMASTDESVKCWDLAANQTM-- 390
+ W++ S ++P A + PV+ V W DG+ +A + V+ + + M
Sbjct: 397 KVWDL--SKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQ 454
Query: 391 --QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMT 525
++ AH V + C+ T DKT+K WD T V T
Sbjct: 455 HLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYT 501
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 33.9 bits (74), Expect = 0.14
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
Frame = +1
Query: 226 RCWEVETSGKTVPKAAQPMDGPVLDV---AWHDDGTKVFMASTDESVKCWDLAANQTM-- 390
+ W++ S ++P A + PV+ V W DG+ +A + V+ + + M
Sbjct: 397 KVWDL--SKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQ 454
Query: 391 --QVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMT 525
++ AH V + C+ T DKT+K WD T V T
Sbjct: 455 HLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYT 501
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/108 (23%), Positives = 47/108 (43%)
Frame = +1
Query: 190 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWD 369
T L +GS D V+ W + G ++ + + + G + S D V +D
Sbjct: 590 TLLASGSDDGSVKLWSIN-QGVSIGTIKTKANICCVQFP-SETGRSLAFGSADHKVYYYD 647
Query: 370 LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAV 513
L N + + KT +++ + + L+++S D TLK WD ++
Sbjct: 648 LR-NPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSI 694
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/108 (23%), Positives = 47/108 (43%)
Frame = +1
Query: 190 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWD 369
T L +GS D V+ W + G ++ + + + G + S D V +D
Sbjct: 590 TLLASGSDDGSVKLWSIN-QGVSIGTIKTKANICCVQFP-SETGRSLAFGSADHKVYYYD 647
Query: 370 LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAV 513
L N + + KT +++ + + L+++S D TLK WD ++
Sbjct: 648 LR-NPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSI 694
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 223 VRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQV-- 396
V W+ + +GPV + W DG + + + V+ WD +N+ ++
Sbjct: 114 VYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLR 173
Query: 397 AAHDAPVKTCHW 432
H++ V + W
Sbjct: 174 GGHESRVGSLAW 185
Score = 31.5 bits (68), Expect = 0.75
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 11/83 (13%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWD----LAANQTMQ----VAAHDAPVKTCHWIKAPN 447
V + W + G K+ D V WD ++N T Q H A V+ W P
Sbjct: 221 VCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW--CPF 278
Query: 448 YTCLMTTS---WDKTLKFWDTRT 507
L+ T D +KFW+T T
Sbjct: 279 QASLLATGGGVGDGKIKFWNTHT 301
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 286 GPVLDVAWHDDGTK--VFMASTDESVKCWDLAANQTMQVAAHDAPV-KTCHWIKAPNYTC 456
G V D+A+ + + V D+ +K WD++ + HDAPV C K N
Sbjct: 453 GAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHFTFEGHDAPVYSICPHYK-ENIQF 511
Query: 457 LMTTSWDKTLKFW 495
+ +T+ D +K W
Sbjct: 512 IFSTAIDGKIKAW 524
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 223 VRCWEVETSGKTVPKAAQPMD-GPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQV- 396
V W+ +SG T D GPV + W DG + + + V+ WD +N+ ++
Sbjct: 148 VYLWDA-SSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTL 206
Query: 397 -AAHDAPVKTCHW 432
H++ V + W
Sbjct: 207 RGGHESRVGSLAW 219
Score = 31.5 bits (68), Expect = 0.75
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWD---LAANQTMQ----VAAHDAPVKTCHWIKAPNY 450
V + W + G K D V WD ++ QT Q H A V+ W P
Sbjct: 255 VCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAW--CPFQ 312
Query: 451 TCLMTTS---WDKTLKFWDTRT 507
L+ T D +KFW+T T
Sbjct: 313 ASLLATGGGVGDGKIKFWNTHT 334
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 33.5 bits (73), Expect = 0.18
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 327
V +L FSP + L +GS D V + E GKT+ + VL V DG
Sbjct: 203 VRSLVFSPVDPRV---LFSGSDDGHVNMHDAE--GKTLLGSMSGHTSWVLSVDASPDGGA 257
Query: 328 VFMASTDESVKCWDL---AANQTM 390
+ S+D +V+ WDL AA QTM
Sbjct: 258 IATGSSDRTVRLWDLKMRAAIQTM 281
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTS 471
+LD++W + +S D++V+ WD+ +++ AH+ V TC + ++ S
Sbjct: 509 ILDLSW-SKSQLLLSSSMDKTVRLWDIETKTCLKLFAHNDYV-TCIQFSPVDENYFLSGS 566
Query: 472 WDKTLKFW--DTRTAVPSMTLNLTERAYCADVEYPMAVVGT 588
D ++ W R V L+ A C + A++G+
Sbjct: 567 LDAKIRIWSIQDRHVVEWSDLHEMVTAACYTPDGQGALIGS 607
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQP-MDGPVLDVAWHDDGT 324
V+ + +SP T I S D + ++ +T K A++ G + V+W D
Sbjct: 54 VNCIRYSPDG----TKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 325 KVFMASTDESVKCWDLAANQTM 390
+V S D+S K W++A + T+
Sbjct: 110 RVLTVSADKSAKVWEVAEDGTI 131
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/87 (18%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 178 VTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESV 357
V + +++ V W+ + + +GPV + W DG + + + V
Sbjct: 117 VDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEV 176
Query: 358 KCWDLAANQTMQV--AAHDAPVKTCHW 432
+ WD +N+ ++ H++ V + W
Sbjct: 177 QVWDCVSNRHVRTLRGGHESRVGSLAW 203
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWD---LAANQTMQ----VAAHDAPVKTCHWIKAPNY 450
V + W + G K+ D V WD ++N T Q H A V+ W P
Sbjct: 239 VCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAW--CPFQ 296
Query: 451 TCLMTTS---WDKTLKFWDTRT 507
L+ T D + FW+T T
Sbjct: 297 ASLLATGGGVGDGKINFWNTHT 318
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 33.1 bits (72), Expect = 0.24
Identities = 23/100 (23%), Positives = 41/100 (41%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLA 375
L AG+ D + W ++ AA + + V+ + +++ + D S+K W L
Sbjct: 236 LFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLD 295
Query: 376 ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
Q +Q V I + L++ S D T+K W
Sbjct: 296 NLQCIQTLTEHTSV-VMSLICWDQF--LLSCSLDNTVKIW 332
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQ 384
V +A K++ AS DE+V+ WD A+ Q
Sbjct: 147 VTGIALPSGSDKLYTASKDETVRIWDCASGQ 177
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 457 LMTTSWDKTLKFWDTRTAVPSMTLNLTERAYCADVEYPMAVVG 585
L T S D+T++ WD + + LNL C E P +VG
Sbjct: 159 LYTASKDETVRIWDCASGQCTGVLNLGGEVGCIISEGPWLLVG 201
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 33.1 bits (72), Expect = 0.24
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 5/122 (4%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVP-KAAQPMDG---PVLDVA-WH 312
V+ L+F P L + G+ V CWE++ + K P G ++++ W
Sbjct: 149 VTGLDFHPNGELLASIDTTGT----VLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWS 204
Query: 313 DDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKF 492
DG + + V +D + + D C+ APN + T+ DK +
Sbjct: 205 PDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLL 264
Query: 493 WD 498
WD
Sbjct: 265 WD 266
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +1
Query: 190 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWD 369
+ L AG D W+ ET G + V+W G ++ +++ D+S+ WD
Sbjct: 36 SLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVSAADKSLTLWD 95
Query: 370 LAANQ 384
++ +
Sbjct: 96 VSTGE 100
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 328 VFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
V D+ +K WDL+ + H+APV + + N + +T+ D +K W
Sbjct: 470 VVTCGDDKLIKVWDLSGKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAW 525
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 328 VFMASTDESVKCWDL----AANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
V+ S D CWD+ A N+ Q + C + + T S+D+TL+ W
Sbjct: 179 VYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVW 238
Query: 496 DTRTAVPSMTLNLT 537
DTR+ S LN T
Sbjct: 239 DTRSV--SRPLNET 250
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 205 GSWDCQVRCWEVETS---GKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWD 369
GS DC+ CW++ S + + G + D +F S DE+++ WD
Sbjct: 182 GSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVWD 239
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 223 VRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAA 402
V W+ + V P GPV VA+H +G + + + +K WDL + +Q
Sbjct: 263 VTMWKPTSQAPLVQMQCHP--GPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQ-TI 319
Query: 403 HDAPVKT 423
H KT
Sbjct: 320 HSFHAKT 326
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 32.3 bits (70), Expect = 0.43
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Frame = +1
Query: 133 PPDDTVSALE---FSPPSVTLH---TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPV 294
PP D V+ L S V+ H + L GS D ++R W+ A V
Sbjct: 5 PPPDPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGV 64
Query: 295 LDVA---WHDDGTKVFMASTDESVKCWDL 372
L VA W + K+ D +VKCWD+
Sbjct: 65 LAVAASPWLGED-KIISQGRDGTVKCWDI 92
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVA-AHDAPVKTCHWIKAP--NYTCLM 462
V+DV++H + +F S D ++ WD ++ + A AH +P ++
Sbjct: 20 VMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPWLGEDKII 79
Query: 463 TTSWDKTLKFWD 498
+ D T+K WD
Sbjct: 80 SQGRDGTVKCWD 91
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 319 GTKVFMASTDESVKCWDLAANQT-MQVAAHDAPVKTCH-WIKAPNYTCLMTTSWDKTLKF 492
G ++ S D+++K WDL Q M + H V + W K CL+++S D T+K
Sbjct: 322 GEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDK-----CLISSSLDGTIKL 376
Query: 493 W 495
W
Sbjct: 377 W 377
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 31.5 bits (68), Expect = 0.75
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 307 WHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTC--HWIKAPNYTCLMTTSWDK 480
W + D +++ WD + ++ + + K KA + + +T S DK
Sbjct: 183 WGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDK 242
Query: 481 TLKFWDTRT 507
T K WD RT
Sbjct: 243 TAKLWDMRT 251
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 31.5 bits (68), Expect = 0.75
Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 3/131 (2%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 327
V + F+P +TF A S D ++ W + + A +D D
Sbjct: 145 VMQVTFNPKDT--NTFASA-SLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPY 201
Query: 328 VFMASTDESVKCWDLAAN---QTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
+ S D + K WD QT++ H+ + H P ++T S D T++ W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFH----PELPIIITGSEDGTVRIWH 257
Query: 499 TRTAVPSMTLN 531
T TLN
Sbjct: 258 ATTYRLENTLN 268
Score = 29.5 bits (63), Expect = 3.0
Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
+++AG+ D +R + T K K + + VA H V +S D +K WD
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKI--KVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 373 AANQ--TMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLN 531
T H V + T + S D+T+K W+ + P+ TL+
Sbjct: 129 EKGWLCTQIFEGHSHYVMQVTFNPKDTNT-FASASLDRTIKIWNLGSPDPNFTLD 182
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 31.1 bits (67), Expect = 0.99
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDE-SVKCWDLA--------ANQTMQVAAHD-APVKTCHWIKA 441
V +AW F+ S ++ +VK +D+ +N + + HD A + I A
Sbjct: 322 VESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSYNISA 381
Query: 442 PNYTCLMTTSWDKTLKFWDTRTAVPS 519
PN L T S D+T+K WD PS
Sbjct: 382 PNL--LATGSKDRTVKLWDLSNNEPS 405
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 340 STDESVKCWDLAANQTMQVAAHDAPVKTCHWIK-APNYTCLMTTSWDK-TLKFWDT 501
S D +VK WDL+ N+ +A H+ +I +P+ L+ LK WDT
Sbjct: 389 SKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWDT 444
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 31.1 bits (67), Expect = 0.99
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Frame = +1
Query: 190 TFLIAGSWDCQVRCWEVETSG--KTVPKAAQPMDGPVLDVAWHDDGTKVF-MASTDESVK 360
T L +GS DC V+ W + T+ A V V + + + S+D
Sbjct: 810 TKLASGSDDCSVKLWNINERNCLGTIRNIAN-----VCCVQFSPQSSHLLAFGSSDFRTY 864
Query: 361 CWDLAANQTMQ--VAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 504
C+DL +T ++ H+ V ++ N T L+T S D TLK WD +
Sbjct: 865 CYDLRNLRTPWCILSGHNKAVSYAKFLD--NET-LVTASTDNTLKLWDLK 911
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVA-AHDAPVKTCHWIKAPNYTCLMTT 468
VLD+ W D + S D S WD+ Q+ AH V+ W Y +++
Sbjct: 56 VLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSS 115
Query: 469 SWDKTLKFWDTRTAVPS 519
D+T + + + S
Sbjct: 116 --DRTCRIYANKPQTKS 130
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVA-AHDAPVKTCHWIKAPNYTCLMTT 468
VLD+ W D + S D S WD+ Q+ AH V+ W Y +++
Sbjct: 115 VLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSS 174
Query: 469 SWDKTLKFWDTRTAVPS 519
D+T + + + S
Sbjct: 175 --DRTCRIYANKPQTKS 189
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVA-AHDAPVKTCHWIKAPNYTCLMTT 468
VLD+ W D + S D S WD+ Q+ AH V+ W Y +++
Sbjct: 115 VLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSS 174
Query: 469 SWDKTLKFWDTRTAVPS 519
D+T + + + S
Sbjct: 175 --DRTCRIYANKPQTKS 189
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +1
Query: 310 HDDGTKV---FMASTDESVKC--WDLAANQTMQV-AAHDAPVKTCHWIKAPNYTCLMTTS 471
H DG V ++A+ S +C +DL N + AHD V + AP L+++S
Sbjct: 416 HGDGASVSPSWIAAGFSSGQCRLFDLRENGFISSWRAHDGYVTK---LVAPESHLLVSSS 472
Query: 472 WDKTLKFWDTR 504
DKTL+ WD R
Sbjct: 473 LDKTLRIWDLR 483
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 307 WHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKT--CHWIKAPNYTCLMTTSWDK 480
W + D+ ++ WD + ++ + + K KA + + +T S DK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDK 215
Query: 481 TLKFWDTRT 507
T K WD RT
Sbjct: 216 TAKLWDMRT 224
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 307 WHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKT--CHWIKAPNYTCLMTTSWDK 480
W + D+ ++ WD + ++ + + K KA + + +T S DK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDK 215
Query: 481 TLKFWDTRT 507
T K WD RT
Sbjct: 216 TAKLWDMRT 224
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 307 WHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKT--CHWIKAPNYTCLMTTSWDK 480
W + D+ ++ WD + ++ + + K KA + + +T S DK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDK 215
Query: 481 TLKFWDTRT 507
T K WD RT
Sbjct: 216 TAKLWDMRT 224
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 30.7 bits (66), Expect = 1.3
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +1
Query: 199 IAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMAST---DESVKCWD 369
I+GS D V + T GK V D V V + + +A+T D+ + WD
Sbjct: 258 ISGSKDGSVHIVNIVT-GKVVSSLNSHTDS-VECVKFSPSSATIPLAATGGMDKKLIIWD 315
Query: 370 LAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDT 501
L + + H+ V + WI Y L T + T+ WD+
Sbjct: 316 LQHSTPRFICEHEEGVTSLTWIGTSKY--LATGCANGTVSIWDS 357
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQ--VAAHDAPVKTCHWIKAPNYTCLMT 465
V +A DG+ ++ AS D S K W + + + AHD + I + T
Sbjct: 195 VSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINA---IVVSKDGFVYT 251
Query: 466 TSWDKTLKFWDTRTAVPSMTLNLTE 540
S DK +K W+ + S+ LT+
Sbjct: 252 GSADKKIKVWNKKDKKHSLVATLTK 276
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 328 VFMASTDESVKCWDLA-ANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
V S D V WDL A + AHD V + + P C++T+S D T++ W
Sbjct: 243 VIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSY--HPKEDCMLTSSVDGTIRVW 297
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 319 GTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSW-DKTLKFW 495
G + S D W+ + M+V D V C I+ + ++ TS D T+K W
Sbjct: 633 GEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNC--IQCHPFDSVVATSGIDNTIKIW 690
Query: 496 DTRTAVPSM 522
+VPS+
Sbjct: 691 SPTASVPSI 699
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 327
V L + P S H+F+++ D V+ ++ S + D V ++++
Sbjct: 303 VEKLAWDPHSE--HSFVVSLK-DGTVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAPN 359
Query: 328 VFMA-STDESVKCWDLAANQTMQVAAH 405
+ S DESVK WDL+ NQ +A +
Sbjct: 360 LLATGSADESVKLWDLSNNQPSWIATN 386
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 187 HTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKV-FMASTDESVKC 363
HT + AG+ D QVR ++ SG + DG V+ V W V + D +++
Sbjct: 160 HTLIAAGTEDVQVRLCDI-ASGAFSHTLSGHRDG-VMSVEWSTSSEWVLYTGGCDGAIRF 217
Query: 364 WDL 372
WD+
Sbjct: 218 WDI 220
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/99 (20%), Positives = 38/99 (38%)
Frame = +1
Query: 286 GPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMT 465
G V ++ G + STD SV+ W++ + ++V D + W ++
Sbjct: 424 GAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNPLSRLP-VLA 482
Query: 466 TSWDKTLKFWDTRTAVPSMTLNLTERAYCADVEYPMAVV 582
+ + L F +T ER + ++ P A V
Sbjct: 483 VAMGRDLFFLNTELGTDEEQEITKERLHSGNIPEPDASV 521
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 193 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWH 312
++ +GS D VR WEVET G+ + K Q D ++ VAW+
Sbjct: 437 WIASGSTDGSVRMWEVET-GRCL-KVWQ-FDEAIMCVAWN 473
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 187 HTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKV-FMASTDESVKC 363
HT + AG+ D QVR ++ SG + DG V+ V W V + D +++
Sbjct: 160 HTLIAAGTDDVQVRLCDI-ASGAFSHTLSGHRDG-VMSVEWSTSSEWVLYTGGCDGAIRF 217
Query: 364 WDL 372
WD+
Sbjct: 218 WDI 220
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +1
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTS 471
+ D+ + +DG V +S D S++ WD+ + + D P+ +PN L T
Sbjct: 560 ITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGVHVDVPITALS--LSPNMDVLATAH 617
Query: 472 WDK 480
D+
Sbjct: 618 SDQ 620
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +1
Query: 283 DGPVLDVAWHDDGTKVFMASTDESVKCWDLAANQTM-QVAAHDAPVKTCHWIKAPNYTCL 459
+GPV V +H+ D +K W+ ++ + + H ++T + Y +
Sbjct: 51 EGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQF--HHEYPWI 108
Query: 460 MTTSWDKTLKFWD--TRTAVPSMT 525
++ S D+T++ W+ +RT V +T
Sbjct: 109 VSASDDQTIRIWNWQSRTCVSVLT 132
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 29.1 bits (62), Expect = 4.0
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPM----DGPVLDVAWHD 315
V+ ++F P T GS D R +++ T + + QP +GPV +A+
Sbjct: 189 VNTVKFFPDGYRFGT----GSDDGTCRLYDIRTGHQL--QVYQPHGDGENGPVTSIAFSV 242
Query: 316 DGTKVFMA-STDESVKCWDLAANQT-----MQVAAHDAPVKTCHWIKAPNYTCLMTTSWD 477
G +F +++ + WD + +Q +H + +C + A + L T SWD
Sbjct: 243 SGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRI-SCLGLSADG-SALCTGSWD 300
Query: 478 KTLKFW 495
LK W
Sbjct: 301 SNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 29.1 bits (62), Expect = 4.0
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Frame = +1
Query: 148 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPM----DGPVLDVAWHD 315
V+ ++F P T GS D R +++ T + + QP +GPV +A+
Sbjct: 251 VNTVKFFPDGYRFGT----GSDDGTCRLYDIRTGHQL--QVYQPHGDGENGPVTSIAFSV 304
Query: 316 DGTKVFMA-STDESVKCWDLAANQT-----MQVAAHDAPVKTCHWIKAPNYTCLMTTSWD 477
G +F +++ + WD + +Q +H + +C + A + L T SWD
Sbjct: 305 SGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRI-SCLGLSADG-SALCTGSWD 362
Query: 478 KTLKFW 495
LK W
Sbjct: 363 SNLKIW 368
>At2g43500.1 68415.m05405 RWP-RK domain-containing protein low
similarity to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 947
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +3
Query: 366 GLSSQPNDAGSGARRSSEDLPLDQSAQL 449
GLSS NDA ARRS ED+P D S +L
Sbjct: 696 GLSSLDNDAH--ARRSQEDMPDDTSFKL 721
>At5g55440.1 68418.m06906 hypothetical protein contains Pfam profile
PF03478: Protein of unknown function (DUF295)
Length = 365
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 95 PVLI*LPNIVLFYKPTIYSLQICLNNTRKTQ 3
P +I LP++ L YKP ++ ++CL+++ Q
Sbjct: 107 PRVISLPSLKLDYKPATHATEVCLSSSDPVQ 137
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +1
Query: 349 ESVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFW 495
+S++ W+++ N+TM + AH+ + + A + + S DK +K W
Sbjct: 884 QSLELWNMSENKTMTLPAHEGLITSLAVSTATG--LVASASHDKLVKLW 930
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/95 (23%), Positives = 37/95 (38%)
Frame = +1
Query: 112 KDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP 291
K+V +P + + S +H + GS +V E+ T + +
Sbjct: 379 KEVVAVNPVQVSTLSFVVSNHYNAMHLAIGKGSGSFEVWKCEISTRKFEQIVSTNAHNQV 438
Query: 292 VLDVAWHDDGTKVFMASTDESVKCWDLAANQTMQV 396
V +AW DG ++ S D V+ W L N +V
Sbjct: 439 VTGLAWSYDGRCLYSCSQDNYVRSWILCENAISEV 473
>At3g14240.1 68416.m01803 subtilase family protein contains
similarity to SBT1 GI:1771160 from [Lycopersicon
esculentum]
Length = 775
Score = 28.7 bits (61), Expect = 5.3
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = -2
Query: 569 GYSTSAQYALSVRLRVMLGTAVRVSQ--NFRVLSQEVVMRHV*LGALIQWQVFTGASCAA 396
GYS+S S+ ++ G V + N R E+V ++ LG +I VF G A
Sbjct: 381 GYSSSLCLEGSLDPNLVKGKIVLCDRGINSRATKGEIVRKNGGLGMIIANGVFDGEGLVA 440
Query: 395 TCIVWLAAKSQHFTLSSVEAIKTFVPSSCQATSRTGPSIGCAALGT 258
C V L A S S + I+ ++ S ++ S P+ GT
Sbjct: 441 DCHV-LPATS--VGASGGDEIRRYISESSKSRSSKHPTATIVFKGT 483
>At1g79090.2 68414.m09222 expressed protein 11408 (cDNA not
full-length)
Length = 793
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 370 SPNTSHFRLLKP*KPSSHHHARRHLG 293
SPN S F L+P PS HH + +H G
Sbjct: 229 SPNFSPFPNLQPQLPSMHHGSPQHTG 254
>At1g79090.1 68414.m09221 expressed protein 11408 (cDNA not
full-length)
Length = 793
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 370 SPNTSHFRLLKP*KPSSHHHARRHLG 293
SPN S F L+P PS HH + +H G
Sbjct: 229 SPNFSPFPNLQPQLPSMHHGSPQHTG 254
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 28.3 bits (60), Expect = 7.0
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMAS-TDESVKCW-- 366
+ +D VR W++E G ++ A++P+ + +A TK+ +A TD + CW
Sbjct: 177 VFTSGYDSIVRMWDME-EGLSIA-ASKPLGCTIRALA---ADTKLLVAGGTDGFIHCWKS 231
Query: 367 --------DLAANQT----MQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWD 498
DL Q ++ H+ P+ + A + T + + SWD +++ WD
Sbjct: 232 LDGLRNLFDLTGFQKEKTEFRLWGHEGPITSL----ALDMTSIFSGSWDMSVRIWD 283
Score = 28.3 bits (60), Expect = 7.0
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 190 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDES-VKCW 366
T + +GSWD VR W+ +S K V K + D V +A H+ +AST S V W
Sbjct: 268 TSIFSGSWDMSVRIWD-RSSMKCV-KTLRHSDW-VWGLAPHE----TTLASTSGSDVYIW 320
Query: 367 DLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTR 504
D+++ + + T ++ L T D +K ++ R
Sbjct: 321 DVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIR 366
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTV 261
LI+GS DC +R W++E SG +
Sbjct: 552 LISGSMDCTIRIWDLE-SGNVI 572
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 316 DGTKVFMASTDESVKCWDLAANQTMQVAAHDAPVK 420
DG+++ AS+D +VK WD +Q P++
Sbjct: 358 DGSRIITASSDCTVKVWDSKTTDCLQTFKPPPPLR 392
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 451 TCLMTTSWDKTLKFWDT 501
T L + SWD+TLK W T
Sbjct: 178 TLLYSVSWDRTLKIWRT 194
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 247 SGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCWDL 372
+GKT+ + +D AWH DG + D++ + WD+
Sbjct: 308 TGKTLETLSGHLDFSFAS-AWHPDGVTFSTGNQDKTCRVWDI 348
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 196 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDESVKCW 366
L +GSWD ++ W + S K + D V+ DD VF S D ++K W
Sbjct: 260 LYSGSWDKTLKVWRLSDS-KCLESIEAHDDAVNTVVSGFDD--LVFTGSADGTLKVW 313
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,389,221
Number of Sequences: 28952
Number of extensions: 403558
Number of successful extensions: 1490
Number of sequences better than 10.0: 138
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2009406400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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