Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A17
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 43 3e-04
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 40 0.003
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 39 0.004
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 38 0.007
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.28
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.48
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 32 0.64
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 1.5
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 6.0
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 6.0
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 7.9
AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical ... 28 7.9
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 56.8 bits (131), Expect = 2e-08
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 2/239 (0%)
Frame = +1
Query: 10 LVLIIRDYLSNRSFLISSRGNAFPAPXTSQPESRKAPPSPRLLFSLYINDIPRSPETHLA 189
L++ + ++LSNRSF + + + A SP LLF +Y+NDI +A
Sbjct: 46 LLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSP-LLFGIYVNDISSILPEKVA 104
Query: 190 L--FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 363
FADDT +Y S K LQ+A + W + ++ +N +K
Sbjct: 105 CKQFADDTKLYAS-TPKTESENNLQSALDAVVDWTKGSKLTLNQSK-------------- 149
Query: 364 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 543
T+ + + RR++ + PI + LG + ++ F H + + A F
Sbjct: 150 TVHVTVGKRRID------FKYHLDGYPIERKAITRDLGFLISEKLDFSDHWRKCINLAKF 203
Query: 544 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCR 720
L ++ +K + + LYKT IRP + Y +VV + + K+ + +Q+ F R
Sbjct: 204 QLANMFNKYSTSNKKLM---ILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 42.7 bits (96), Expect = 3e-04
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 5/218 (2%)
Frame = +1
Query: 25 RDYLSNRSFLISSRGNAFPAPXTSQPESRKAPP---SPRLLFSLYIND--IPRSPETHLA 189
+++L NR+F S + N F + S P S P S LLF L+IN+ I +P +++
Sbjct: 854 KEFLENRTF--SVKINKFVSK-NSYPISSGVPQGSVSGPLLFILFINNLLIDLAPTINIS 910
Query: 190 LFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTL 369
FADD I+++ +Q + + W + + + PTKS
Sbjct: 911 CFADDVKIFHTDPTI------IQNSIDIIVSWSKLNELPLAPTKSAL------------- 951
Query: 370 SIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFIL 549
+ L TR N + ++ PI + V+ LG+ D ++ F HI V + +
Sbjct: 952 -LALGTRNKN------QSYSVDGVPITPSSTVRDLGLITDCKLKFEHHIVKV---SCLAM 1001
Query: 550 GRLYPMICRRSKMSLRNKVTLYKTCIRPVMIYASVVFA 663
R ++ S S + LYKT + P+M Y S V+A
Sbjct: 1002 LRSKQILKAFSSNSPKFYAHLYKTYVAPIMNYCSEVYA 1039
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 39.5 bits (88), Expect = 0.003
Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 26/238 (10%)
Frame = +1
Query: 28 DYLSNRSFLISSRGNAFPAPXTSQPESRKAPPSPRLLFSLYINDIPRS--PETHLALFAD 201
D+LS+R+F + + P K S LF ++IN + S P + FAD
Sbjct: 31 DFLSSRTFSVKVNNHIDPNIHPISSGVPKGSVSGPFLFLIFINSLLLSVPPSISCSAFAD 90
Query: 202 DTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSI-P 378
D +Y L+ QT + W ++ + K+ A+L K G N L + P
Sbjct: 91 DLKVY--SHSPPLI----QTTIDLITTWSENNKLPLAVHKA-ALLNKLGFSSNCVLLLAP 143
Query: 379 LPTRRVNNPAPAVR--------------------PITMFD-QPIPWAPK--VKYLGVTLD 489
L V A R P T++ +P +P + LG+ D
Sbjct: 144 LINSLVCRLLAASRTGVSTVAHSKTCLLHLGKKNPKTVYKINNLPISPSNIARDLGILTD 203
Query: 490 SRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMIYASVVFA 663
S++TF+PHIK + + L R ++ + L+KT I P++ Y S V++
Sbjct: 204 SKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKTYILPLIEYGSAVYS 258
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 39.1 bits (87), Expect = 0.004
Identities = 31/127 (24%), Positives = 53/127 (41%)
Frame = +1
Query: 136 LFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINP 315
LF+ Y+ D+P +T L +ADD +I +K ++Q + ++ ++ + I+
Sbjct: 543 LFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISA 602
Query: 316 TKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSR 495
KST +F P P I D PIP K LG+TL++
Sbjct: 603 EKSTVTVFSCD-----------PKEHKTKP-----DIYWMDDPIPVINAPKLLGITLNTM 646
Query: 496 MTFRPHI 516
+ H+
Sbjct: 647 TGTKDHV 653
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/93 (26%), Positives = 43/93 (46%)
Frame = +1
Query: 442 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 621
PI + LG + ++ F H K + A F L ++ +K + + LYKT
Sbjct: 140 PIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKT 196
Query: 622 CIRPVMIYASVVFAHAARIHLKSFQIIQSRFCR 720
IRP + Y +VV + + K+ + +Q+ F R
Sbjct: 197 FIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 322 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 459
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 322 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 459
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 367 LSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 537
++ PLP+ P VRP T FD IP+ ++G + T + R RA
Sbjct: 890 MATPLPSFN-GRPPSVVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 340 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 459
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 382 PTRRVNNPAPAVRPITMFDQPIPW 453
P R V++P +PIT+FDQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 741 PRGSDGYPAKTGLNNLKG 688
PRG DG+P + GL+ L G
Sbjct: 1153 PRGDDGFPGRDGLDGLPG 1170
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 741 PRGSDGYPAKTGLNNLKG 688
PRG DG+P + GL+ L G
Sbjct: 1410 PRGDDGFPGRDGLDGLPG 1427
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 741 PRGSDGYPAKTGLNNLKG 688
PRG DG+P + GL+ L G
Sbjct: 1409 PRGDDGFPGRDGLDGLPG 1426
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 398 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 273
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical
protein Y54E10BR.5 protein.
Length = 183
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 428 VIGRTAGAGLLTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRN 285
V+GRT G LL + GM++++ P LK + F+GL + H N
Sbjct: 141 VVGRTKG--LLPYV---GMVTIIMNDYPKLKYAVLAFLGLFVLLHKEN 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,042,945
Number of Sequences: 27780
Number of extensions: 454198
Number of successful extensions: 1566
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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