Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A15
(861 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 330 2e-89
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 300 3e-80
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;... 260 4e-68
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 226 5e-58
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n... 217 3e-55
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ... 141 2e-32
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 95 2e-18
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 95 2e-18
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 92 2e-17
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 91 2e-17
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 89 2e-16
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc... 86 1e-15
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 85 2e-15
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 83 7e-15
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 82 2e-14
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 81 3e-14
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 81 3e-14
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 75 2e-12
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 74 5e-12
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha... 70 9e-11
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 67 6e-10
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella... 65 2e-09
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 62 1e-08
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ... 60 7e-08
UniRef50_Q78TB4 Cluster: 16 days embryo head cDNA, RIKEN full-le... 40 0.081
UniRef50_Q69NC6 Cluster: Putative uncharacterized protein OJ1742... 35 2.3
UniRef50_Q1EYM9 Cluster: Purine catabolism PurC-like; n=2; Clost... 35 3.0
UniRef50_Q54JS8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.0
UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
UniRef50_UPI00015B6051 Cluster: PREDICTED: similar to ENSANGP000... 33 7.0
UniRef50_Q5Y974 Cluster: Structural polyprotein; n=13; Solenopsi... 33 9.3
UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1; ... 33 9.3
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 330 bits (812), Expect = 2e-89
Identities = 143/204 (70%), Positives = 171/204 (83%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
HRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DR
Sbjct: 3 HRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDR 62
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 396
PGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNW 122
Query: 397 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 576
+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+ME
Sbjct: 123 HKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLME 182
Query: 577 IQLNGGTIEDKVKWAREHLEKPIP 648
IQ+NGGT+ +K+ WARE LE+ +P
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVP 206
Score = 76.6 bits (180), Expect = 8e-13
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = +2
Query: 650 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH 805
V+ VF QDEMID I SRWHTKKLPRK H+GLRKVACIGAWH
Sbjct: 207 VNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWH 258
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 300 bits (736), Expect = 3e-80
Identities = 132/204 (64%), Positives = 161/204 (78%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
HRKFSAPRHG +GF P KRS RHRGKVK +P+DDPS+PVHLTAF+GYKAGMTH +RE R
Sbjct: 3 HRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHR 62
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 396
PG KI+K+E VEAVTI+ETPP+V VGVVGY+ TP GLR+ T++AEH+S++CRRRFYK+W
Sbjct: 63 PGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDW 122
Query: 397 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 576
+ W+D G+K ++KDF M +YC V+RVI HTQMKLL RQKKAHIME
Sbjct: 123 HKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIME 182
Query: 577 IQLNGGTIEDKVKWAREHLEKPIP 648
IQLNGGT+ +KV WA+ LEK +P
Sbjct: 183 IQLNGGTVAEKVAWAQARLEKQVP 206
Score = 75.4 bits (177), Expect = 2e-12
Identities = 36/58 (62%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = +2
Query: 650 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH--LLGC 817
V SVF+Q E+ID I SRWHTKKLPRK HKGLRKVACIGAWH +GC
Sbjct: 207 VHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGC 264
>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein rpl-3 - Caenorhabditis elegans
Length = 353
Score = 260 bits (636), Expect = 4e-68
Identities = 113/166 (68%), Positives = 133/166 (80%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 396
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 397 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 534
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 68.9 bits (161), Expect = 2e-10
Identities = 31/49 (63%), Positives = 32/49 (65%)
Frame = +2
Query: 659 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH 805
V A +MID I SRWHTKKLPRK HKGLRKVACIGAWH
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 210
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 226 bits (553), Expect = 5e-58
Identities = 105/206 (50%), Positives = 141/206 (68%), Gaps = 3/206 (1%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
H KF PRHG +GF P+KRSR+ RG+ ++FPKDDPS+ HLT+F+ YKAGMTH+VR+ DR
Sbjct: 54 HCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDVDR 113
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 396
PGSK+NKKE+VE VTI+E PPMV VG+VGY +TP G + + TVWA H S + RRRFYKNW
Sbjct: 114 PGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYKNW 173
Query: 397 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQ---KKAH 567
+ GR + + K + ++RV+AHTQ++ L+ + KKAH
Sbjct: 174 KQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKKAH 233
Query: 568 IMEIQLNGGTIEDKVKWAREHLEKPI 645
+ EIQ+NGGTI K++ A+ LEK +
Sbjct: 234 VSEIQINGGTIAQKIELAKSLLEKEV 259
Score = 57.2 bits (132), Expect = 5e-07
Identities = 26/52 (50%), Positives = 28/52 (53%)
Frame = +2
Query: 650 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH 805
+DSVF Q E D RW LPRK H+GLRKVACIGAWH
Sbjct: 261 IDSVFQQSEACDVCAVTKGHGFTGVVKRWGVACLPRKTHRGLRKVACIGAWH 312
>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
Rattus norvegicus
Length = 380
Score = 217 bits (530), Expect = 3e-55
Identities = 100/185 (54%), Positives = 131/185 (70%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
+R FSAPRHGS+GF P+K S H GKVK FPKDD SKPVHLT F+ +KA MTH++++ DR
Sbjct: 3 YRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKVDR 62
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 396
P SK+NKKE+VE V I+ETPPMV +G+VGYIE P GL V+AEH+S ++ FYKNW
Sbjct: 63 PESKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHISGKSKKCFYKNW 122
Query: 397 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 576
+ ++G++ +E +FK M +YC V+ ++AHTQM LL QKKAH+ME
Sbjct: 123 HSEKKASTKYF------DMGKRQLEMEFKSMKKYCQVICIVAHTQMCLLSLHQKKAHLME 176
Query: 577 IQLNG 591
IQ+ G
Sbjct: 177 IQVMG 181
>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
B) (TARBP-B). - Bos Taurus
Length = 340
Score = 141 bits (341), Expect = 2e-32
Identities = 82/187 (43%), Positives = 111/187 (59%)
Frame = +1
Query: 88 KRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTII 267
K S +H+GKV FPKD SKPV+L+AF+GY+AGMTHVVR+ DRPGSK++KKE+VE VTI+
Sbjct: 1 KCSSQHQGKVTGFPKDGSSKPVYLSAFLGYQAGMTHVVRKVDRPGSKVHKKEVVEVVTIV 60
Query: 268 ETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQD 447
ET P + VG VG ET GL+ +V+A+H+S +C+R K Y W+
Sbjct: 61 ETMPFMTVGTVGCTETIWGLQTFKSVFAKHISNECKRTGIK--YKTNTSPNTKARSSWR- 117
Query: 448 ELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWARE 627
G ++ TQM LL QKKAH+ E Q+N G + K+ WA +
Sbjct: 118 --GTSAL-------------------TQMCLLPLCQKKAHLTESQVNRGPVA-KLDWAHK 155
Query: 628 HLEKPIP 648
LE+ +P
Sbjct: 156 KLEQQVP 162
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 95.5 bits (227), Expect = 2e-18
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Frame = +1
Query: 55 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 234
P+ GSMGF P+KR+ R G++ ++P+ + S+ + + F G+KAGMTHV+ P S
Sbjct: 7 PKRGSMGFSPRKRAIRPFGRITSWPETESSE-IRVQGFAGWKAGMTHVLMRDTNPHSTSA 65
Query: 235 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMS--EDCRRRFYKNWYXXX 408
+EI +AVT++E PPM + V GY TP+G++ +WA+ S + RF
Sbjct: 66 GQEIRKAVTVVEVPPMKVLAVRGYHMTPYGMQTAGEIWADSSSGPDGLMPRFANQTRGDR 125
Query: 409 XXXXXXXXXXWQDELGRK--SIEKDFKKMIRYCSV--VRVIAHTQMKLLKQRQKKAH-IM 573
+ + + D + ++ VR+I TQ L+K K IM
Sbjct: 126 DIEEGRKPAKRAGRIPVREGGMNGDALAALTDSNLCEVRLIVATQPALVKSVPSKTPVIM 185
Query: 574 EIQLNGGTIEDKVKWAREHL 633
E+ L GG K++WA E L
Sbjct: 186 EVGLVGGDTGAKLEWAHERL 205
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 95.5 bits (227), Expect = 2e-18
Identities = 56/116 (48%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = +1
Query: 40 RKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRP 219
RK APR GS+GF P+KR+ R +VK +P+ D KPV L AF+GY+AGMTHV DRP
Sbjct: 4 RKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVDDRP 62
Query: 220 GSKINKKEIVEAVTIIETPPMVCVGVVGYIETPH-GLRALLTVWAEHMSE-DCRRR 381
G + KEI VTI+ETPPM V Y P+ G +L WA+ E + +RR
Sbjct: 63 GRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRR 118
Score = 33.5 bits (73), Expect = 7.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 623 ENIWRNLSLVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR--KKHKGLRKV 784
+++ NL V+ VF + +++D I RW K+LPR K KG R++
Sbjct: 184 KDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRRI 239
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 91.9 bits (218), Expect = 2e-17
Identities = 64/199 (32%), Positives = 106/199 (53%), Gaps = 2/199 (1%)
Frame = +1
Query: 55 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 234
PR GS+ F P+KR++R +++++P++D V L AF YKAGM+H + D P S
Sbjct: 8 PRRGSLAFSPRKRAKRPVPRIRSWPEEDT---VRLQAFPVYKAGMSHAFIKEDNPKSPNA 64
Query: 235 KKEIVEAVTIIETPPM-VC-VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXX 408
+E+ +TI+E PP+ VC + V G E + L L VWA+++ ++ R+
Sbjct: 65 GQEVFTPITILEAPPINVCAIRVYGRNERNY-LTTLTEVWADNLDKELERKI-------- 115
Query: 409 XXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLN 588
+ RK++E D + + VRV+ HT KL +KK I+EI++
Sbjct: 116 ---------KLPKKEDRKTVE-DLEALKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIG 165
Query: 589 GGTIEDKVKWAREHLEKPI 645
G IE+++ +A+E L K +
Sbjct: 166 GKDIEERLNYAKEILGKQL 184
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 91.5 bits (217), Expect = 2e-17
Identities = 45/99 (45%), Positives = 62/99 (62%)
Frame = +1
Query: 55 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 234
P+ GSMGF P+KR+ R G+VK++P+ D S V + F G+KAGMTHV+ PGS
Sbjct: 7 PKKGSMGFGPRKRANRPYGRVKSWPETD-SDEVRVQGFAGWKAGMTHVMMRDLNPGSPSA 65
Query: 235 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWA 351
E+ +AVT++E PPM + V GY TP+G + WA
Sbjct: 66 GAEVRKAVTVVEVPPMRVLAVRGYKMTPYGKQTAGEAWA 104
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 88.6 bits (210), Expect = 2e-16
Identities = 66/195 (33%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
Frame = +1
Query: 55 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 234
PR GSMGF P+KR+ + ++P DD V L F GYKAGMTHVV D+ +
Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 64
Query: 235 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 414
E VT++ETPPM V Y +TP+G + L VWA+ E R
Sbjct: 65 GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDRTL---------- 114
Query: 415 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHT-QMKLLKQRQKKAHIMEIQLNG 591
DEL IE + I + +RVI HT +K +ME ++ G
Sbjct: 115 -SVPDEGGDTDEL----IEALDTEEI---ADIRVITHTVPGDTAGVPKKNPDVMETRVGG 166
Query: 592 GTIEDKVKWAREHLE 636
GT+ D++++A + +E
Sbjct: 167 GTLADRLEFAADLIE 181
>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L3P -
Pyrococcus furiosus
Length = 365
Score = 85.8 bits (203), Expect = 1e-15
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Frame = +1
Query: 43 KFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 222
K PR GS+GF P+KR++ +++++PK+ V + F GYKAGMTH++ D PG
Sbjct: 3 KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 223 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSED---CRRRFYK- 390
N KEI VTIIETPP+ G+ Y GL V D + R K
Sbjct: 60 -LTNGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKP 118
Query: 391 ----NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSV--VRVIAHTQMKLLKQR 552
+Y + E+ + + + + MI+ + VR I TQ ++K +
Sbjct: 119 KPKMTFYKLLERRIATLPKNYTQEMFEQKLGQ-LEDMIKEGEIVDVRAIVATQPWVIKLK 177
Query: 553 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPI 645
KK +ME + G ++E+K + +E L K +
Sbjct: 178 -KKPEVMEYAIGGTSVEEKFNYIKEKLGKEL 207
Score = 35.9 bits (79), Expect = 1.3
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +2
Query: 650 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH 805
V V + E++D I RW K K KG RKV IG WH
Sbjct: 209 VGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWH 260
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 85.0 bits (201), Expect = 2e-15
Identities = 59/197 (29%), Positives = 92/197 (46%)
Frame = +1
Query: 55 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 234
PR GS+ F P+KR+ R +++++P ++ V + F GYKAGMTH + D P S
Sbjct: 12 PRRGSLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTE 68
Query: 235 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 414
+EI VTI++ PPM + Y TP G R + WAE E R +
Sbjct: 69 GEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAEIPEELEMDRVF-----TVPK 123
Query: 415 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 594
+EL + I ++ +RVI TQ K +KK +ME ++ G
Sbjct: 124 DGEAGDLDKIEELVDEGIVEE----------IRVIVATQPKKAGVPKKKPDVMEYRIGGK 173
Query: 595 TIEDKVKWAREHLEKPI 645
+ ++ ++A E L + I
Sbjct: 174 DVRERFEYAVEILSEEI 190
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 83.4 bits (197), Expect = 7e-15
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 41/240 (17%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFP------------------KDDPSKPVHLT 162
HRK+SAPRHGS+G P+KR+ + +++++P K KPV L
Sbjct: 3 HRKYSAPRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEAVNKGIAPKPV-LL 61
Query: 163 AFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGY-IETPHGLRALL 339
++ YKAGM+H + DRP + + KEI VT+++ PP++ +G+ GY I HGL +
Sbjct: 62 GYVAYKAGMSHAIIIDDRPHTFTSGKEIAIPVTVLDAPPILILGLRGYKIHPMHGLLSFG 121
Query: 340 TVW---AEHMSEDCRRRFYKNWYXXXXXXXXXXXXXW--------------QDELGRKSI 468
VW E + E + + N + E G K +
Sbjct: 122 EVWRSPVEALKELYEKIYSDNPFINLGAKDIVRKYLKGLRKVNPGLVKPEPHSEYGFKFL 181
Query: 469 EKDFKKMIRYCSV-----VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHL 633
E ++K+ + +RVIA T L +KK I+EI++ GGT+ +++ +A + L
Sbjct: 182 ENNWKEKLERLKAAELADIRVIASTIPVLSGIGKKKPEIIEIKIGGGTLSERIDYAEKLL 241
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 81.8 bits (193), Expect = 2e-14
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 5/208 (2%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
HRK ++PR GS G P+KRS + +P+ + P L F+GYK GMTHV D
Sbjct: 3 HRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMIDDW 61
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLT-VWAEHMSE--DCRRRFY 387
P S N KEI VT++E PP++ + + Y G ++T W+ + D RR +
Sbjct: 62 PNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRRIH 121
Query: 388 K-NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKA 564
+ + + +L I+ + +++ + R++ TQ + + KKA
Sbjct: 122 SISSFLKDDESKKKFDERFNTKL--DLIKSNLDRIVYF----RLLVSTQPRKIPSLGKKA 175
Query: 565 -HIMEIQLNGGTIEDKVKWAREHLEKPI 645
++EIQ+ GG + ++ +A L K I
Sbjct: 176 PDLVEIQIGGGEKKSQLDYALNILGKEI 203
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 81.4 bits (192), Expect = 3e-14
Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Frame = +1
Query: 40 RKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRP 219
RK APR GS G P+KR+ +V+++P D KP+ AF+GYK GMTHV+ DR
Sbjct: 4 RKKEAPRRGSAGLRPRKRAASIVPRVRSWPSIDEVKPL---AFLGYKVGMTHVIMIDDRE 60
Query: 220 GSKINKKEIVEAVTIIETPPMVCVG--VVGYIETPHGLRALLTVW 348
+EI VT+IETPPMV +G V GY + G AL VW
Sbjct: 61 HVDTAGQEIFVPVTVIETPPMVVLGARVYGY-DPNRGRYALTEVW 104
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 81.4 bits (192), Expect = 3e-14
Identities = 61/197 (30%), Positives = 93/197 (47%)
Frame = +1
Query: 55 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 234
PR GS +YP+KR+R +V+ +P++ F GYK GM HV+ S
Sbjct: 7 PRRGSRAYYPRKRARSIVARVRRWPQNREG----FLGFAGYKVGMLHVIGVEMNKNSPFY 62
Query: 235 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 414
+E A T+IE PP+ V V Y +TP+G + L VWA+ + +D R F
Sbjct: 63 GQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCEVWAKDLPKDLERVF---------- 112
Query: 415 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 594
+D+ + K +++ S VRV+A TQ +L +KK ++EI + GG
Sbjct: 113 ------PLPKDQSYHEEQLKKLEEVKSRVSEVRVLAATQPRLSGLGKKKPELIEIAV-GG 165
Query: 595 TIEDKVKWAREHLEKPI 645
E + A E L K +
Sbjct: 166 PPEKALSLALEKLGKDL 182
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 75.4 bits (177), Expect = 2e-12
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Frame = +1
Query: 40 RKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRP 219
RK +PR GS+ + P+ R++ +++A+PK D +P + A G+KAG +V DR
Sbjct: 4 RKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSIDDRE 62
Query: 220 GSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF-YKNW 396
K++V T++ TPP++ +G+ GY + GL A V+AE + + + KN
Sbjct: 63 KVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKSIAKEISLKN- 121
Query: 397 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 576
+ E + EK KK+ ++V I+ + L QKK +I E
Sbjct: 122 ---------------KQENALDNAEKSLKKIKEIFAIV-AISPSAAGL---EQKKPYIFE 162
Query: 577 IQLNGGTIEDKVKWAREHLEKPI 645
++GG I + +E L K I
Sbjct: 163 ASVSGGDIPKQFAHVKELLGKEI 185
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 73.7 bits (173), Expect = 5e-12
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Frame = +1
Query: 52 APRHGSMGFYPKKRSRRHRGKVKAFPK--DDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 225
APR GS+G+ P+ R+R + K++ + + D P + F+G+KAGM+H+V DRP S
Sbjct: 6 APRRGSLGYSPRVRARSQKPKMRNWAELGDQPK----IQGFVGFKAGMSHIVMVDDRPHS 61
Query: 226 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVW 348
EI VTI+E P M G+ Y ++P+G + + W
Sbjct: 62 ATEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGEAW 102
>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
symbiosum
Length = 328
Score = 69.7 bits (163), Expect = 9e-11
Identities = 36/111 (32%), Positives = 61/111 (54%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
HRKFS PR GS+ + P+ R+R +++ +P+ +P L A G+KAG +V DR
Sbjct: 3 HRKFSQPRRGSLAYSPRGRARSMEARIRGWPERQ-GEP-RLLAHAGFKAGCIQIVSIDDR 60
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSED 369
+ K++V T++ TPP+ +G+ GY + +G V+AE + +
Sbjct: 61 EHTPNAGKQLVSLGTVLVTPPLHVLGMRGYSKGHYGRHVKFDVFAEDLPRE 111
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 66.9 bits (156), Expect = 6e-10
Identities = 36/113 (31%), Positives = 61/113 (53%)
Frame = +1
Query: 52 APRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKI 231
APR GSMGF+P+KR+ R ++K +PK + KP+ AF YK GMTH + I
Sbjct: 8 APRRGSMGFWPRKRASRIYPRIKTWPKIEEIKPL---AFAAYKVGMTHTI-------LNI 57
Query: 232 NKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 390
N + + VT++E P ++ +G Y + L+ + +++ + + R+ K
Sbjct: 58 NGERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK 110
>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
natans|Rep: Ribosomal protein L3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 370
Score = 64.9 bits (151), Expect = 2e-09
Identities = 37/103 (35%), Positives = 54/103 (52%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
HRKF PR GS+GF PKKRS R K + + +++ F K THV+R +
Sbjct: 3 HRKFEHPRIGSLGFLPKKRSNRIFPSSKTYKEIIHIYYPYISQFASLKVASTHVLRICNI 62
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTV 345
SK + I++ VT++E PP+ VG+ Y + L L T+
Sbjct: 63 VSSKSYQNPIIDEVTLMECPPIEVVGLCAYALSSGHLVKLKTI 105
Score = 55.6 bits (128), Expect = 2e-06
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +2
Query: 650 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAW 802
++S+F ++++ID I SRW +LPRK H+GLRKVACIG W
Sbjct: 189 INSIFHENDIIDAIGITKGHGTKGVVSRWGITRLPRKTHRGLRKVACIGPW 239
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +1
Query: 58 RHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINK 237
R GSM +YP+ R++ +++++P + S PV + F G+K GMTHV R S
Sbjct: 8 RRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVTAG 65
Query: 238 KEIVEAVTIIETPPMVCVGVVGYIETPHG-LRALLTVWAEHMSED 369
+ I VT+IE PP+ +G+ Y E G + + W +++ ++
Sbjct: 66 QPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVVYEKWTQNLDKE 110
>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 173
Score = 60.1 bits (139), Expect = 7e-08
Identities = 38/103 (36%), Positives = 49/103 (47%)
Frame = -1
Query: 648 RDRFLQMFSGPFHFVLDGTTVKLDFHNVXXXXXXXXXXXXSVGNDSYNTTVADHLLEIFF 469
R+ F ++F GP +FV DGTTV LDF V V DS N +V + F
Sbjct: 71 RNFFFKVFFGPVNFVGDGTTVDLDFSQVSFLLRQWSLLDLGVSQDSDNRSVLLDSGQFSF 130
Query: 468 Y*FASKLILPFLTGFSESLLLAFVPVFVEATSTVFRHMLRPDS 340
F + F F E LL F+PV VE++S F + PDS
Sbjct: 131 NLFGVSGV--FTRVFGEGFLLGFIPVLVESSSDFFTQVFSPDS 171
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = -3
Query: 805 MPSSNAGNFPKTLVFLTG*LLCVPTRSDTFVSFALGDTNAVNHFILGKHRIDQ 647
MPS+N N +T V L+ L P+ DT + GD+N +NHFIL ++R+++
Sbjct: 19 MPSTNTSNLSQTSVGLSWQFLGTPSVGDTLETVTFGDSNDINHFILFENRVNR 71
>UniRef50_Q78TB4 Cluster: 16 days embryo head cDNA, RIKEN
full-length enriched library, clone:C130041A08
product:weakly similar to 60S RIBOSOMAL PROTEIN L3; n=1;
Mus musculus|Rep: 16 days embryo head cDNA, RIKEN
full-length enriched library, clone:C130041A08
product:weakly similar to 60S RIBOSOMAL PROTEIN L3 - Mus
musculus (Mouse)
Length = 109
Score = 39.9 bits (89), Expect = 0.081
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +1
Query: 103 HRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKK 240
HR + K FPK+D K HL F+ +A MT+ V E +R G K +K
Sbjct: 8 HRIQAKDFPKEDLPKSAHLIVFLVSRAVMTYFVWEINRSGPKWTRK 53
>UniRef50_Q69NC6 Cluster: Putative uncharacterized protein
OJ1742_G01.32; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1742_G01.32 - Oryza sativa subsp. japonica (Rice)
Length = 100
Score = 35.1 bits (77), Expect = 2.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 237 ERDRGGCHHHRDSSDGLCRCCWIH*DPSWT 326
E DRG CHH+ S GLCR C + P+ T
Sbjct: 36 EGDRGCCHHYLTGSPGLCRRCPLRAHPAAT 65
>UniRef50_Q1EYM9 Cluster: Purine catabolism PurC-like; n=2;
Clostridiaceae|Rep: Purine catabolism PurC-like -
Clostridium oremlandii OhILAs
Length = 551
Score = 34.7 bits (76), Expect = 3.0
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +1
Query: 502 SVVRVIAHTQMKLLKQRQKKAH--IMEIQLNGGTIEDKVKWAREHLEKPI 645
SV + I + Q LL QR +K H +M + L GG+IED + RE+L P+
Sbjct: 126 SVFKEIFNKQTSLL-QRLEKVHEQLMNVVLEGGSIEDIGRVTRENLRNPL 174
>UniRef50_Q54JS8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1205
Score = 34.3 bits (75), Expect = 4.0
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 88 KRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH--VVREPDRPGSKINKKEIVEAVT 261
K +++ K+K +++ K + AFI A ++ +R DR ++N I + T
Sbjct: 19 KANKKKAAKLKKLEQNEALKGRNPKAFISQAAYASNRLTIRNLDREAKRVNLPVIDRSGT 78
Query: 262 IIETPPMVCVGVVG 303
+ETPP V + VVG
Sbjct: 79 AVETPPYV-IAVVG 91
>UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1;
Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized
protein - Sulfurovum sp. (strain NBC37-1)
Length = 135
Score = 33.9 bits (74), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 439 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 594
WQD K I+KD+ + YC +R+ H +L ++ K HI+ + G
Sbjct: 29 WQDNSDAKYIQKDWNGAMLYCRQLRLAGHNDWRLPSIKELK-HILSTEPRDG 79
>UniRef50_UPI00015B6051 Cluster: PREDICTED: similar to
ENSANGP00000006197; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000006197 - Nasonia
vitripennis
Length = 1307
Score = 33.5 bits (73), Expect = 7.0
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -3
Query: 415 PSSCICTSFCRSDVDSLQTYAPPRQSKERVVHEGSQCIQQHRHKPSEESR 266
PS+ I T SD++ L P QS V+ +GS+ HR K SEE R
Sbjct: 840 PSASINTKKYESDIEILSN---PSQSSIEVLDDGSKSTTPHRKKSSEERR 886
>UniRef50_Q5Y974 Cluster: Structural polyprotein; n=13; Solenopsis
invicta virus 1|Rep: Structural polyprotein - Solenopsis
invicta virus 1
Length = 1137
Score = 33.1 bits (72), Expect = 9.3
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -1
Query: 282 HRRSLDDGDSLHDLFLVDF*TGTVRFSNHVGHTGLITDKSSQMNRFARVV 133
HRR + ++ D+ LVD T++ VG GLITD +S ++ A V
Sbjct: 475 HRRDVTAARAIADMILVDERDATMQVQAEVGGQGLITDIASTVSAVAGAV 524
>UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 253
Score = 33.1 bits (72), Expect = 9.3
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 451 LGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREH 630
L RKSIE + + IR+ +V I +K++++++ + E +L GT + + A
Sbjct: 135 LARKSIEYNTYQSIRFKTVFPDIVEENIKVIEEKKNNQNEKEDELLAGTKKQEDAIANAA 194
Query: 631 LEKPI 645
EKPI
Sbjct: 195 KEKPI 199
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 891,207,146
Number of Sequences: 1657284
Number of extensions: 18586532
Number of successful extensions: 43359
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 41604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43324
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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