Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A15
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 321 3e-88
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 321 3e-88
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 321 3e-88
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 321 3e-88
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 260 1e-69
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 260 1e-69
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 113 1e-25
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 113 1e-25
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.8
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 5.6
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 321 bits (789), Expect = 3e-88
Identities = 140/203 (68%), Positives = 167/203 (82%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 396
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 397 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 576
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 577 IQLNGGTIEDKVKWAREHLEKPI 645
IQ+NGGTIE KV WAREHLEK +
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQV 205
Score = 81.8 bits (193), Expect = 6e-16
Identities = 37/52 (71%), Positives = 38/52 (73%)
Frame = +2
Query: 650 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH 805
VD+VFAQDEMID I SRWHTKKLPRK HKGLRKVACIGAWH
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 258
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 321 bits (789), Expect = 3e-88
Identities = 140/203 (68%), Positives = 167/203 (82%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 396
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 397 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 576
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 577 IQLNGGTIEDKVKWAREHLEKPI 645
IQ+NGGTIE KV WAREHLEK +
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQV 205
Score = 81.8 bits (193), Expect = 6e-16
Identities = 37/52 (71%), Positives = 38/52 (73%)
Frame = +2
Query: 650 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH 805
VD+VFAQDEMID I SRWHTKKLPRK HKGLRKVACIGAWH
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 258
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 321 bits (789), Expect = 3e-88
Identities = 140/203 (68%), Positives = 167/203 (82%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 396
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 397 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 576
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 577 IQLNGGTIEDKVKWAREHLEKPI 645
IQ+NGGTIE KV WAREHLEK +
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQV 205
Score = 81.8 bits (193), Expect = 6e-16
Identities = 37/52 (71%), Positives = 38/52 (73%)
Frame = +2
Query: 650 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH 805
VD+VFAQDEMID I SRWHTKKLPRK HKGLRKVACIGAWH
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 258
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 321 bits (789), Expect = 3e-88
Identities = 140/203 (68%), Positives = 167/203 (82%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 396
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 397 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 576
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 577 IQLNGGTIEDKVKWAREHLEKPI 645
IQ+NGGTIE KV WAREHLEK +
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQV 205
Score = 81.8 bits (193), Expect = 6e-16
Identities = 37/52 (71%), Positives = 38/52 (73%)
Frame = +2
Query: 650 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH 805
VD+VFAQDEMID I SRWHTKKLPRK HKGLRKVACIGAWH
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 258
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 260 bits (636), Expect = 1e-69
Identities = 113/166 (68%), Positives = 133/166 (80%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 396
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 397 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 534
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/49 (63%), Positives = 32/49 (65%)
Frame = +2
Query: 659 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH 805
V A +MID I SRWHTKKLPRK HKGLRKVACIGAWH
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 210
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 260 bits (636), Expect = 1e-69
Identities = 113/166 (68%), Positives = 133/166 (80%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 216
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 217 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 396
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 397 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 534
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/49 (63%), Positives = 32/49 (65%)
Frame = +2
Query: 659 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH 805
V A +MID I SRWHTKKLPRK HKGLRKVACIGAWH
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 210
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 113 bits (273), Expect = 1e-25
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 439 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 618
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 619 AREHLEKPI 645
AREHLEK +
Sbjct: 99 AREHLEKQV 107
Score = 81.8 bits (193), Expect = 6e-16
Identities = 37/52 (71%), Positives = 38/52 (73%)
Frame = +2
Query: 650 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH 805
VD+VFAQDEMID I SRWHTKKLPRK HKGLRKVACIGAWH
Sbjct: 109 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 160
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPK 132
HRKFSAPRHG MGF PKKRSR +RG++KAF K
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 113 bits (273), Expect = 1e-25
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 439 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 618
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 619 AREHLEKPI 645
AREHLEK +
Sbjct: 99 AREHLEKQV 107
Score = 81.8 bits (193), Expect = 6e-16
Identities = 37/52 (71%), Positives = 38/52 (73%)
Frame = +2
Query: 650 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKKHKGLRKVACIGAWH 805
VD+VFAQDEMID I SRWHTKKLPRK HKGLRKVACIGAWH
Sbjct: 109 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 160
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 37 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPK 132
HRKFSAPRHG MGF PKKRSR +RG++KAF K
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 271 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 399
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +2
Query: 554 KRRLTLWKSNLTVVPSRTK*NGPENIWRNLSL------VDSVFAQD-EMIDC 688
K RL L K +V S K GP+ W N+ L ++S+F D + IDC
Sbjct: 473 KNRLNLSKEEKELVSSYMKNQGPQKKWENMPLHETSIRINSLFYVDGKKIDC 524
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 252 GCHHHRDSSDGLCRCCWIH*DPSWTTRSFDCLGGAYV*RLSTSLLQKLVQMQEEGF 419
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,562,523
Number of Sequences: 27780
Number of extensions: 449618
Number of successful extensions: 1126
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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