Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A13
(879 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 34 0.11
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 34 0.14
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 32 0.58
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 31 1.3
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 29 3.1
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 3.1
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 29 4.1
At1g31310.1 68414.m03831 hydroxyproline-rich glycoprotein family... 29 4.1
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 29 5.4
At5g33390.1 68418.m03985 glycine-rich protein similar to nuclear... 28 7.2
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 28 7.2
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 7.2
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 9.5
At3g03776.1 68416.m00385 hydroxyproline-rich glycoprotein family... 28 9.5
At2g30900.1 68415.m03766 expressed protein 28 9.5
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 9.5
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -1
Query: 843 PLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXS 703
PLP S P P P PPP P ++ PP PP S
Sbjct: 581 PLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPPPPPS 627
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -1
Query: 861 PXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPP 712
P LQ+ P P S P P P PPP P + + LPP PP
Sbjct: 43 PCLQNQPPPPPSPPPPSCT---PSPPPPSPPPPKKSSCPPSPLPPPPPPP 89
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = -1
Query: 873 PXXQPXLQHXPLPEXSAPLPXXXXLXPEPPPXX---PXHXXQXTLXXKXLPPXXXPPQXS 703
P QP Q P P P P P PP P L K LPP PPQ +
Sbjct: 45 PPPQPDPQ-PPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTT 103
Query: 702 P 700
P
Sbjct: 104 P 104
Score = 31.5 bits (68), Expect = 0.77
Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
Frame = -1
Query: 873 PXXQPXLQHXPLPEXSAPLPXXXX--LXPEPP---PXXPXHXXQXTLXXKXLPPXXXPPQ 709
P P P P + P P L P PP P P L K LPP PPQ
Sbjct: 96 PLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQ 155
Query: 708 XSP 700
+P
Sbjct: 156 TTP 158
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/59 (27%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = -1
Query: 873 PXXQPXLQHXPLPEXSAPLPXXXXLXPEP-PPXXPXHXXQXTLXXKXLPPXXXPPQXSP 700
P P ++ P P P + P P PP H T+ PP PP P
Sbjct: 46 PPKPPAVKPPKPPAVKPPTPKPPTVKPHPKPPTVKPHPKPPTVKPHPKPPTVKPPHPKP 104
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -1
Query: 873 PXXQPXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXSP 700
P P PLP P P + P PPP P H PP PP P
Sbjct: 9 PYYSPPSHQHPLPSPVPPPPSH--ISPPPPPFSPPHHPP---PPHFSPPHQPPPSPYP 61
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -1
Query: 843 PLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXSP 700
P P PLP P PPP P TL PP PP SP
Sbjct: 394 PRPPVVTPLPPPSL--PSPPPPAPIFSTPPTLTSPP-PPSPPPPVYSP 438
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = -1
Query: 849 HXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXSP 700
H P P S P P L P PPP + PP P P
Sbjct: 573 HSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPP 622
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -1
Query: 873 PXXQPXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPP 712
P + + PLPE S PLP E PP P LPP PP
Sbjct: 1046 PVAEKSTEFNPLPEDSPPLP------QESPPPLPPLPPSPPPPSPPLPPSSLPP 1093
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = -1
Query: 843 PLPEXSAP-LPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXSP 700
PLP+ S P LP P P P P PP PP P
Sbjct: 1063 PLPQESPPPLPPLPPSPPPPSPPLPPSSLPPPPPAALFPPLPPPPSQPP 1111
>At1g31310.1 68414.m03831 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 383
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 855 LQHXPLPEXSAPLPXXXXLXPEPPP 781
LQ P P S PLP L P PPP
Sbjct: 220 LQPPPPPPPSQPLPRPLLLPPPPPP 244
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = -1
Query: 873 PXXQPXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXSP 700
P P P P P P P PPP P + PP PP P
Sbjct: 388 PPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSPPYVYP 445
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = -1
Query: 873 PXXQPXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXSP 700
P P P P P P + P PPP P + PP PP SP
Sbjct: 385 PPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPP--SPPPYVYPPPPPPYVYPPPPSP 440
>At5g33390.1 68418.m03985 glycine-rich protein similar to nuclear
antigen EBNA-1 (GI:3342234) {Cercopithecine herpesvirus
15}
Length = 118
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = +2
Query: 701 GXCXGGXFXGGRXFXXSVXXSXXXG*XGGGSGXRXXXXGRGALXSGRG 844
G GG GG S S G G GSG R G G SGRG
Sbjct: 12 GSGSGGSVSGGSGSGGS--GSGGSGSGGSGSGGRANGRGNGGRGSGRG 57
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = -1
Query: 873 PXXQPXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXSP 700
P P P P +PLP P P P P LP PP SP
Sbjct: 200 PLPGPPPSPSPTPGPDSPLPSPGPDSPLPLPGPPPSSSPTPGPDSPLPSPGPPPSPSP 257
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/54 (27%), Positives = 18/54 (33%)
Frame = -1
Query: 861 PXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXSP 700
P + P P S P P P P P H + PP PP +P
Sbjct: 694 PPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPPPPVFSPPPPAP 747
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = -1
Query: 873 PXXQPXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPP 712
P P H P P +P P P PPP P H + PP PP
Sbjct: 533 PPPPPPPVHSPPPPVHSPPPPPVYSPPPPPP--PVHSPPPPVFSPP-PPVYSPP 583
>At3g03776.1 68416.m00385 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 177
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = -1
Query: 864 QPXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQ 709
QP L + P P P + P+PP P Q K PP PP+
Sbjct: 114 QPQL-YNPTICPPPPPPYPRQVHPQPPAPPPYKFHQKEPVAKSFPPTPAPPK 164
>At2g30900.1 68415.m03766 expressed protein
Length = 367
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 186 G*LRFWSTGGDSRSYVARSESIMRDSDVAFSHSAALAIAQV 64
G R WS G S + ++ IM S +A H+A + +A+V
Sbjct: 266 GRAREWSKQGGKGSCIGETKPIMGSSYLAGPHAAEMVVAKV 306
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = -1
Query: 861 PXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXSP 700
P P P +P P P P P P H PP PP SP
Sbjct: 562 PVYSSPPPPHVYSP-PPPVASPPPPSPPPPVHSPPPPPVFSPPPPVFSPPPPSP 614
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,395,009
Number of Sequences: 28952
Number of extensions: 166724
Number of successful extensions: 673
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2067932800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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